Update readme

update docker tag in readme

Signed-off-by: manuedelf <59697943+edelfour@users.noreply.github.com>

.bandit

@@ -1 +1,2 @@
-skips: ['B101']
+[bandit]
+skips: B101

.docker-entry.sh

@@ -1,3 +1,3 @@
 #!/bin/bash
-cp -nr /oopt-gnpy/examples /shared
+cp -nr /opt/application/oopt-gnpy/gnpy/example-data /shared
 exec "$@"

.docker-travis.sh

@@ -15,7 +15,7 @@ if [[ $ALREADY_FOUND == 0 ]]; then
   # shared directory setup: do not clobber the real data
   mkdir trash
   cd trash
-  docker run -it --rm --volume $(pwd):/shared ${IMAGE_NAME} ./transmission_main_example.py
+  docker run -it --rm --volume $(pwd):/shared ${IMAGE_NAME} gnpy-transmission-example
 else
   echo "Image ${IMAGE_NAME}:${IMAGE_TAG} already available, will just update the other tags"
 fi

.dockerignore

@@ -0,0 +1 @@
+venv/

.github/pull_request_template.md

@@ -0,0 +1,7 @@
+# Thanks for contributing to GNPy
+
+If it isn't much trouble, please send your contribution as patches to our Gerrit.
+Here's [how to submit patches](https://review.gerrithub.io/Documentation/intro-gerrit-walkthrough-github.html), and here's a [list of stuff we are currently working on](https://review.gerrithub.io/p/Telecominfraproject/oopt-gnpy/+/dashboard/main:main).
+Just sign in via your existing GitHub account.
+
+However, if you feel more comfortable with filing GitHub PRs, we can work with that too.

.gitignore

@@ -3,6 +3,7 @@ __pycache__/
 *.py[cod]
 *$py.class
 .ipynb_checkpoints
+.idea
 
 # C extensions
 *.so
@@ -64,3 +65,5 @@ target/
 
 # MacOS DS_store
 .DS_Store
+
+venv/

.gitreview

@@ -0,0 +1,4 @@
+[gerrit]
+host=review.gerrithub.io
+project=Telecominfraproject/oopt-gnpy
+defaultrebase=0

.travis.yml

@@ -1,20 +1,21 @@
-dist: xenial
+dist: focal
-sudo: false
+os: linux
 language: python
 services: docker
 python:
   - "3.6"
   - "3.7"
+  - "3.8"
+  - "3.9"
+before_install:
+  - sudo apt-get -y install graphviz
 install: skip
 script:
-  - python setup.py install
+  - pip install --editable .
   - pip install pytest-cov rstcheck
-  - pytest --cov-report=xml --cov=gnpy
+  - pytest --cov-report=xml --cov=gnpy -v
-  - rstcheck --ignore-roles cite --ignore-directives automodule --recursive --ignore-messages '(Duplicate explicit target name.*)' .
+  - rstcheck --ignore-roles cite *.rst
-  - ./examples/transmission_main_example.py
+  - sphinx-build -W --keep-going docs/ x-throwaway-location
-  - ./examples/path_requests_run.py
-  - ./examples/transmission_main_example.py examples/raman_edfa_example_network.json --sim examples/sim_params.json --show-channels
-  - sphinx-build docs/ x-throwaway-location
 after_success:
   - bash <(curl -s https://codecov.io/bash)
 jobs:

.zuul.yaml

@@ -0,0 +1,45 @@
+---
+- project:
+    check:
+      jobs:
+        - tox-py38-cover
+        - coverage-diff:
+            voting: false
+            dependencies:
+              - tox-py38-cover-previous
+              - tox-py38-cover
+            vars:
+              coverage_job_name_previous: tox-py38-cover-previous
+              coverage_job_name_current: tox-py38-cover
+        - tox-linters-diff:
+            voting: false
+        - tox-py36-el8
+        - tox-docs-f32
+        - tox-py38-cover-previous
+    gate:
+      jobs:
+        - tox-py38-f32
+        - tox-docs-f32
+    tag:
+      jobs:
+        - oopt-release-python:
+            secrets:
+              - secret: pypi-oopt-gnpy
+                name: pypi_info
+                pass-to-parent: true
+
+- secret:
+    name: pypi-oopt-gnpy
+    data:
+      username: __token__
+      password: !encrypted/pkcs1-oaep
+        - Taod9JmSMtVAvC5ShSbB3UWuccktQvutdySrj0G7a1Nk4tKFQIdwDXEnBuLpHsZVvsU9Q
+          6uk4wRVQABDSdNNI/+M/1FwmZfoxuOXa02U5S1deuxW/rBHTxzYcuB8xriwhArBvTiDMk
+          zyWHVysgDsjlR+85h/DkEhvsaMRDLYWqFwYgXizMoGNKVkwDVIH+qkhBmbggQfDpcYPKT
+          1gq0d6fw0eKVJtO8+vonMEcE0sWZvHmZvSSu0H++gxoe1W/JtzbCteH3Ak0zktwBHI8Qt
+          WBqFvY3laad335tpkFJN5b949N+DP8svCWwRwXmkZlHplPYZWF6QpYbEEXL/6Q0H6VwL+
+          om4f7ybYpKe9Gl939uv2INnXaKe5EU6CMsSw40r2XZCjnSTjWOTgh9pUn2PsoHnqUlALW
+          VR4Z+ipnCrEbu8aTmX3ROcnwYNS7OXkq4uhwDU1u9QjzyMHet6NQQhwhGtimsTo9KhL4E
+          TEUNiRlbAgow9WOwM5r3vRzddO8T2HZZSGaWj75qNRX46XPQWRWgB7ItAwyXgwLZ8UzWl
+          HdztjS3D7Hlsqno3zxNOVlhA5/vl9uVnhFbJnMtUOJAB07YoTJOeR+LjQ0avx/VzopxXc
+          RA/WvJXVZSBrlAHY0+ip4wPZvdi4Ph90gpmvHJvoH82KVfp2j5jxzUhsage94I=

AUTHORS.rst

@@ -7,7 +7,7 @@ To learn how to contribute, please see CONTRIBUTING.md
 
 - Alessio Ferrari (Politecnico di Torino) <alessio.ferrari@polito.it>
 - Anders Lindgren (Telia Company) <Anders.X.Lindgren@teliacompany.com>
-- Andrea d'Amico (Politecnico di Torino) <andrea.damico@polito.it>
+- Andrea D'Amico (Politecnico di Torino) <andrea.damico@polito.it>
 - Brian Taylor (Facebook) <briantaylor@fb.com>
 - David Boertjes (Ciena) <dboertje@ciena.com>
 - Diego Landa (Facebook) <dlanda@fb.com>

Dockerfile

@@ -1,7 +1,18 @@
 FROM python:3.7-slim
-COPY . /oopt-gnpy
+WORKDIR /opt/application/oopt-gnpy
-WORKDIR /oopt-gnpy
+RUN mkdir -p /shared/example-data \
-RUN python setup.py install
+    && groupadd gnpy \
-WORKDIR /shared/examples
+    && useradd -u 1000 -g gnpy -m gnpy \
-ENTRYPOINT ["/oopt-gnpy/.docker-entry.sh"]
+    && apt-get update \
+    && apt-get install git -y \
+    && rm -rf /var/lib/apt/lists/*
+COPY . /opt/application/oopt-gnpy
+WORKDIR /opt/application/oopt-gnpy
+RUN mkdir topology \
+    && mkdir equipment \
+    && mkdir autodesign \
+    && pip install . \
+    && chown -Rc gnpy:gnpy /opt/application/oopt-gnpy /shared/example-data
+USER gnpy
+ENTRYPOINT ["/opt/application/oopt-gnpy/.docker-entry.sh"]
 CMD ["/bin/bash"]

README.rst

@@ -7,7 +7,7 @@
 `gnpy`: mesh optical network route planning and optimization library
 ====================================================================
 
-|docs| |build| |doi|
+|pypi| |docs| |travis| |doi| |contributors| |codacy-quality| |codecov|
 
 **`gnpy` is an open-source, community-developed library for building route
 planning and optimization tools in real-world mesh optical networks.**
@@ -31,108 +31,10 @@ There are `weekly calls <https://telecominfraproject.workplace.com/events/702894
 Newcomers, users and telecom operators are especially welcome there.
 We encourage all interested people outside the TIP to `join the project <https://telecominfraproject.com/apply-for-membership/>`__.
 
-Branches and Tagged Releases
-----------------------------
-
-- all releases are `available via GitHub <https://github.com/Telecominfraproject/oopt-gnpy/releases>`_
-- the `master <https://github.com/Telecominfraproject/oopt-gnpy/tree/master>`_ branch contains stable, `validated code <https://github.com/Telecominfraproject/oopt-gnpy/wiki/Testing-for-Quality>`_. It is updated from develop on a release schedule determined by the OOPT-PSE Working Group.
-- the `develop <https://github.com/Telecominfraproject/oopt-gnpy/tree/develop>`_ branch contains the latest code under active development, which may not be fully validated and tested.
-
 How to Install
 --------------
 
-Using prebuilt Docker images
+Install either via `Docker <docs/install.rst#install-docker>`__, or as a `Python package <docs/install.rst#install-pip>`__.
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-Our `Docker images <https://hub.docker.com/r/telecominfraproject/oopt-gnpy>`_ contain everything needed to run all examples from this guide.
-Docker transparently fetches the image over the network upon first use.
-On Linux and Mac, run:
-
-
-.. code-block:: shell-session
-
-    $ docker run -it --rm --volume $(pwd):/shared telecominfraproject/oopt-gnpy
-    root@bea050f186f7:/shared/examples#
-
-On Windows, launch from Powershell as:
-
-.. code-block:: powershell
-
-    PS C:\> docker run -it --rm --volume ${PWD}:/shared telecominfraproject/oopt-gnpy
-    root@89784e577d44:/shared/examples#
-
-In both cases, a directory named ``examples/`` will appear in your current working directory.
-GNPy automaticallly populates it with example files from the current release.
-Remove that directory if you want to start from scratch.
-
-Using Python on your computer
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-   **Note**: `gnpy` supports Python 3 only. Python 2 is not supported.
-   `gnpy` requires Python ≥3.6
-
-   **Note**: the `gnpy` maintainers strongly recommend the use of Anaconda for
-   managing dependencies.
-
-It is recommended that you use a "virtual environment" when installing `gnpy`.
-Do not install `gnpy` on your system Python.
-
-We recommend the use of the `Anaconda Python distribution <https://www.anaconda.com/download>`_ which comes with many scientific computing
-dependencies pre-installed. Anaconda creates a base "virtual environment" for
-you automatically. You can also create and manage your ``conda`` "virtual
-environments" yourself (see:
-https://conda.io/docs/user-guide/tasks/manage-environments.html)
-
-To activate your Anaconda virtual environment, you may need to do the
-following:
-
-.. code-block:: shell
-
-    $ source /path/to/anaconda/bin/activate # activate Anaconda base environment
-    (base) $                                # note the change to the prompt
-
-You can check which Anaconda environment you are using with:
-
-.. code-block:: shell
-
-    (base) $ conda env list                          # list all environments
-    # conda environments:
-    #
-    base                  *  /src/install/anaconda3
-
-    (base) $ echo $CONDA_DEFAULT_ENV                 # show default environment
-    base
-
-You can check your version of Python with the following. If you are using
-Anaconda's Python 3, you should see similar output as below. Your results may
-be slightly different depending on your Anaconda installation path and the
-exact version of Python you are using.
-
-.. code-block:: shell
-
-    $ which python                   # check which Python executable is used
-    /path/to/anaconda/bin/python
-    $ python -V                      # check your Python version
-    Python 3.6.5 :: Anaconda, Inc.
-
-From within your Anaconda Python 3 environment, you can clone the master branch
-of the `gnpy` repo and install it with:
-
-.. code-block:: shell
-
-    $ git clone https://github.com/Telecominfraproject/oopt-gnpy # clone the repo
-    $ cd oopt-gnpy
-    $ python setup.py install                                    # install
-
-To test that `gnpy` was successfully installed, you can run this command. If it
-executes without a ``ModuleNotFoundError``, you have successfully installed
-`gnpy`.
-
-.. code-block:: shell
-
-    $ python -c 'import gnpy' # attempt to import gnpy
-
-    $ pytest                  # run tests
 
 Instructions for First Use
 --------------------------
@@ -157,25 +59,24 @@ This example demonstrates how GNPy can be used to check the expected SNR at the
    :target: https://asciinema.org/a/252295
 
 By default, this script operates on a single span network defined in
-`examples/edfa_example_network.json <examples/edfa_example_network.json>`_
+`gnpy/example-data/edfa_example_network.json <gnpy/example-data/edfa_example_network.json>`_
 
 You can specify a different network at the command line as follows. For
 example, to use the CORONET Global network defined in
-`examples/CORONET_Global_Topology.json <examples/CORONET_Global_Topology.json>`_:
+`gnpy/example-data/CORONET_Global_Topology.json <gnpy/example-data/CORONET_Global_Topology.json>`_:
 
 .. code-block:: shell-session
 
-    $ ./examples/transmission_main_example.py examples/CORONET_Global_Topology.json
+    $ gnpy-transmission-example $(gnpy-example-data)/CORONET_Global_Topology.json
 
 It is also possible to use an Excel file input (for example
-`examples/CORONET_Global_Topology.xls <examples/CORONET_Global_Topology.xls>`_).
+`gnpy/example-data/CORONET_Global_Topology.xls <gnpy/example-data/CORONET_Global_Topology.xls>`_).
-The Excel file will be processed into a JSON file with the same prefix. For
+The Excel file will be processed into a JSON file with the same prefix.
-further instructions on how to prepare the Excel input file, see
+Further details about the Excel data structure are available `in the documentation <docs/excel.rst>`__.
-`Excel_userguide.rst <Excel_userguide.rst>`_.
 
 The main transmission example will calculate the average signal OSNR and SNR
 across network elements (transceiver, ROADMs, fibers, and amplifiers)
-between two transceivers selected by the user. Additional details are provided by doing ``transmission_main_example.py -h``. (By default, for the CORONET Global
+between two transceivers selected by the user. Additional details are provided by doing ``gnpy-transmission-example -h``. (By default, for the CORONET Global
 network, it will show the transmission of spectral information between Abilene and Albany)
 
 This script calculates the average signal OSNR = |OSNR| and SNR = |SNR|.
@@ -189,352 +90,74 @@ interference noise.
 .. |Pase| replace:: P\ :sub:`ase`
 .. |Pnli| replace:: P\ :sub:`nli`
 
-Further Instructions for Use (`transmission_main_example.py`, `path_requests_run.py`)
+Further Instructions for Use
--------------------------------------------------------------------------------------
+----------------------------
 
-Design and transmission parameters are defined in a dedicated json file. By
+Simulations are driven by a set of `JSON <docs/json.rst>`__ or `XLS <docs/excel.rst>`__ files.
-default, this information is read from `examples/eqpt_config.json
-<examples/eqpt_config.json>`_. This file defines the equipment libraries that
-can be customized (EDFAs, fibers, and transceivers).
 
-It also defines the simulation parameters (spans, ROADMs, and the spectral
+The ``gnpy-transmission-example`` script propagates a spectrum of channels at 32 Gbaud, 50 GHz spacing and 0 dBm/channel. 
-information to transmit.)
-
-The EDFA equipment library is a list of supported amplifiers. New amplifiers
-can be added and existing ones removed. Three different noise models are available:
-
-1. ``'type_def': 'variable_gain'`` is a simplified model simulating a 2-coil EDFA with internal, input and output VOAs. The NF vs gain response is calculated accordingly based on the input parameters: ``nf_min``, ``nf_max``, and ``gain_flatmax``. It is not a simple interpolation but a 2-stage NF calculation.
-2. ``'type_def': 'fixed_gain'`` is a fixed gain model.  `NF == Cte == nf0` if `gain_min < gain < gain_flatmax`
-3. ``'type_def': None`` is an advanced model. A detailed JSON configuration file is required (by default `examples/std_medium_gain_advanced_config.json <examples/std_medium_gain_advanced_config.json>`_). It uses a 3rd order polynomial where NF = f(gain), NF_ripple = f(frequency), gain_ripple = f(frequency), N-array dgt = f(frequency). Compared to the previous models, NF ripple and gain ripple are modelled.
-
-For all amplifier models:
-
-+------------------------+-----------+-----------------------------------------+
-| field                  |   type    | description                             |
-+========================+===========+=========================================+
-| ``type_variety``       | (string)  | a unique name to ID the amplifier in the|
-|                        |           | JSON/Excel template topology input file |
-+------------------------+-----------+-----------------------------------------+
-| ``out_voa_auto``       | (boolean) | auto_design feature to optimize the     |
-|                        |           | amplifier output VOA. If true, output   |
-|                        |           | VOA is present and will be used to push |
-|                        |           | amplifier gain to its maximum, within   |
-|                        |           | EOL power margins.                      |
-+------------------------+-----------+-----------------------------------------+
-| ``allowed_for_design`` | (boolean) | If false, the amplifier will not be     |
-|                        |           | picked by auto-design but it can still  |
-|                        |           | be used as a manual input (from JSON or |
-|                        |           | Excel template topology files.)         |
-+------------------------+-----------+-----------------------------------------+
-
-The fiber library currently describes SSMF and NZDF but additional fiber types can be entered by the user following the same model:
-
-+----------------------+-----------+-----------------------------------------+
-| field                | type      | description                             |
-+======================+===========+=========================================+
-| ``type_variety``     | (string)  | a unique name to ID the fiber in the    |
-|                      |           | JSON or Excel template topology input   |
-|                      |           | file                                    |
-+----------------------+-----------+-----------------------------------------+
-| ``dispersion``       | (number)  | (s.m-1.m-1)                             |
-+----------------------+-----------+-----------------------------------------+
-| ``gamma``            | (number)  | 2pi.n2/(lambda*Aeff) (w-2.m-1)          |
-+----------------------+-----------+-----------------------------------------+
-
-The transceiver equipment library is a list of supported transceivers. New
-transceivers can be added and existing ones removed at will by the user. It is
-used to determine the service list path feasibility when running the
-`path_request_run.py routine <examples/path_request_run.py>`_.
-
-+----------------------+-----------+-----------------------------------------+
-| field                | type      | description                             |
-+======================+===========+=========================================+
-| ``type_variety``     | (string)  | A unique name to ID the transceiver in  |
-|                      |           | the JSON or Excel template topology     |
-|                      |           | input file                              |
-+----------------------+-----------+-----------------------------------------+
-| ``frequency``        | (number)  | Min/max as below.                       |
-+----------------------+-----------+-----------------------------------------+
-| ``mode``             | (number)  | A list of modes supported by the        |
-|                      |           | transponder. New modes can be added at  |
-|                      |           | will by the user. The modes are specific|
-|                      |           | to each transponder type_variety.       |
-|                      |           | Each mode is described as below.        |
-+----------------------+-----------+-----------------------------------------+
-
-The modes are defined as follows:
-
-+----------------------+-----------+-----------------------------------------+
-| field                | type      | description                             |
-+======================+===========+=========================================+
-| ``format``           | (string)  | a unique name to ID the mode            |
-+----------------------+-----------+-----------------------------------------+
-| ``baud_rate``        | (number)  | in Hz                                   |
-+----------------------+-----------+-----------------------------------------+
-| ``OSNR``             | (number)  | min required OSNR in 0.1nm (dB)         |
-+----------------------+-----------+-----------------------------------------+
-| ``bit_rate``         | (number)  | in bit/s                                |
-+----------------------+-----------+-----------------------------------------+
-| ``roll_off``         | (number)  | Not used.                               |
-+----------------------+-----------+-----------------------------------------+
-| ``tx_osnr``          | (number)  | In dB. OSNR out from transponder.       |
-+----------------------+-----------+-----------------------------------------+
-| ``cost``             | (number)  | Arbitrary unit                          |
-+----------------------+-----------+-----------------------------------------+
-
-Simulation parameters are defined as follows.
-
-Auto-design automatically creates EDFA amplifier network elements when they are
-missing, after a fiber, or between a ROADM and a fiber. This auto-design
-functionality can be manually and locally deactivated by introducing a ``Fused``
-network element after a ``Fiber`` or a ``Roadm`` that doesn't need amplification.
-The amplifier is chosen in the EDFA list of the equipment library based on
-gain, power, and NF criteria. Only the EDFA that are marked
-``'allowed_for_design': true`` are considered.
-
-For amplifiers defined in the topology JSON input but whose ``gain = 0``
-(placeholder), auto-design will set its gain automatically: see ``power_mode`` in
-the ``Spans`` library to find out how the gain is calculated.
-
-Span configuration is performed as follows. It is not a list (which may change
-in later releases) and the user can only modify the value of existing
-parameters:
-
-+-------------------------------------+-----------+---------------------------------------------+
-| field                               | type      | description                                 |
-+=====================================+===========+=============================================+
-| ``power_mode``                      | (boolean) | If false, gain mode. Auto-design sets       |
-|                                     |           | amplifier gain = preceding span loss,       |
-|                                     |           | unless the amplifier exists and its         |
-|                                     |           | gain > 0 in the topology input JSON.        |
-|                                     |           | If true, power mode (recommended for        |
-|                                     |           | auto-design and power sweep.)               |
-|                                     |           | Auto-design sets amplifier power            |
-|                                     |           | according to delta_power_range. If the      |
-|                                     |           | amplifier exists with gain > 0 in the       |
-|                                     |           | topology JSON input, then its gain is       |
-|                                     |           | translated into a power target/channel.     |
-|                                     |           | Moreover, when performing a power sweep     |
-|                                     |           | (see ``power_range_db`` in the SI           |
-|                                     |           | configuration library) the power sweep      |
-|                                     |           | is performed w/r/t this power target,       |
-|                                     |           | regardless of preceding amplifiers          |
-|                                     |           | power saturation/limitations.               |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``delta_power_range_db``            | (number)  | Auto-design only, power-mode                |
-|                                     |           | only. Specifies the [min, max, step]        |
-|                                     |           | power excursion/span. It is a relative      |
-|                                     |           | power excursion w/r/t the                   |
-|                                     |           | power_dbm + power_range_db                  |
-|                                     |           | (power sweep if applicable) defined in      |
-|                                     |           | the SI configuration library. This          |
-|                                     |           | relative power excursion is = 1/3 of        |
-|                                     |           | the span loss difference with the           |
-|                                     |           | reference 20 dB span. The 1/3 slope is      |
-|                                     |           | derived from the GN model equations.        |
-|                                     |           | For example, a 23 dB span loss will be      |
-|                                     |           | set to 1 dB more power than a 20 dB         |
-|                                     |           | span loss. The 20 dB reference spans        |
-|                                     |           | will *always* be set to                     |
-|                                     |           | power = power_dbm + power_range_db.         |
-|                                     |           | To configure the same power in all          |
-|                                     |           | spans, use `[0, 0, 0]`. All spans will      |
-|                                     |           | be set to                                   |
-|                                     |           | power = power_dbm + power_range_db.         |
-|                                     |           | To configure the same power in all spans    |
-|                                     |           | and 3 dB more power just for the longest    |
-|                                     |           | spans: `[0, 3, 3]`. The longest spans are   |
-|                                     |           | set to                                      |
-|                                     |           | power = power_dbm + power_range_db + 3.     |
-|                                     |           | To configure a 4 dB power range across      |
-|                                     |           | all spans in 0.5 dB steps: `[-2, 2, 0.5]`.  |
-|                                     |           | A 17 dB span is set to                      |
-|                                     |           | power = power_dbm + power_range_db - 1,     |
-|                                     |           | a 20 dB span to                             |
-|                                     |           | power = power_dbm + power_range_db and      |
-|                                     |           | a 23 dB span to                             |
-|                                     |           | power = power_dbm + power_range_db + 1      |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``max_fiber_lineic_loss_for_raman`` | (number)  | Maximum linear fiber loss for Raman         |
-|                                     |           | amplification use.                          |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``max_length``                      | (number)  | Split fiber lengths > max_length.           |
-|                                     |           | Interest to support high level              |
-|                                     |           | topologies that do not specify in line      |
-|                                     |           | amplification sites. For example the        |
-|                                     |           | CORONET_Global_Topology.xls defines         |
-|                                     |           | links > 1000km between 2 sites: it          |
-|                                     |           | couldn't be simulated if these links        |
-|                                     |           | were not split in shorter span lengths.     |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``length_unit``                     | "m"/"km"  | Unit for ``max_length``.                    |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``max_loss``                        | (number)  | Not used in the current code                |
-|                                     |           | implementation.                             |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``padding``                         | (number)  | In dB. Min span loss before putting an      |
-|                                     |           | attenuator before fiber. Attenuator         |
-|                                     |           | value                                       |
-|                                     |           | Fiber.att_in = max(0, padding - span_loss). |
-|                                     |           | Padding can be set manually to reach a      |
-|                                     |           | higher padding value for a given fiber      |
-|                                     |           | by filling in the Fiber/params/att_in       |
-|                                     |           | field in the topology json input [1]        |
-|                                     |           | but if span_loss = length * loss_coef       |
-|                                     |           | + att_in + con_in + con_out < padding,      |
-|                                     |           | the specified att_in value will be          |
-|                                     |           | completed to have span_loss = padding.      |
-|                                     |           | Therefore it is not possible to set         |
-|                                     |           | span_loss < padding.                        |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``EOL``                             | (number)  | All fiber span loss ageing. The value       |
-|                                     |           | is added to the con_out (fiber output       |
-|                                     |           | connector). So the design and the path      |
-|                                     |           | feasibility are performed with              |
-|                                     |           | span_loss + EOL. EOL cannot be set          |
-|                                     |           | manually for a given fiber span             |
-|                                     |           | (workaround is to specify higher            |
-|                                     |           | ``con_out`` loss for this fiber).           |
-+-------------------------------------+-----------+---------------------------------------------+
-| ``con_in``,                         | (number)  | Default values if Fiber/params/con_in/out   |
-| ``con_out``                         |           | is None in the topology input               |
-|                                     |           | description. This default value is          |
-|                                     |           | ignored if a Fiber/params/con_in/out        |
-|                                     |           | value is input in the topology for a        |
-|                                     |           | given Fiber.                                |
-+-------------------------------------+-----------+---------------------------------------------+
-
-.. code-block:: json
-
-    {
-        "uid": "fiber (A1->A2)",
-        "type": "Fiber",
-        "type_variety": "SSMF",
-        "params":
-        {
-              "type_variety": "SSMF",
-              "length": 120.0,
-              "loss_coef": 0.2,
-              "length_units": "km",
-              "att_in": 0,
-              "con_in": 0,
-              "con_out": 0
-        }
-    }
-
-ROADMs can be configured as follows. The user can only modify the value of
-existing parameters:
-
-+--------------------------+-----------+---------------------------------------------+
-| field                    |   type    | description                                 |
-+==========================+===========+=============================================+
-| ``target_pch_out_db``    | (number)  | Auto-design sets the ROADM egress channel   |
-|                          |           | power. This reflects typical control loop   |
-|                          |           | algorithms that adjust ROADM losses to      |
-|                          |           | equalize channels (eg coming from different |
-|                          |           | ingress direction or add ports)             |
-|                          |           | This is the default value                   |
-|                          |           | Roadm/params/target_pch_out_db if no value  |
-|                          |           | is given in the ``Roadm`` element in the    |
-|                          |           | topology input description.                 |
-|                          |           | This default value is ignored if a          |
-|                          |           | params/target_pch_out_db value is input in  |
-|                          |           | the topology for a given ROADM.             |
-+--------------------------+-----------+---------------------------------------------+
-| ``add_drop_osnr``        | (number)  | OSNR contribution from the add/drop ports   |
-+--------------------------+-----------+---------------------------------------------+
-| ``restrictions``         | (dict of  | If non-empty, keys ``preamp_variety_list``  |
-|                          |  strings) | and ``booster_variety_list`` represent      |
-|                          |           | list of ``type_variety`` amplifiers which   |
-|                          |           | are allowed for auto-design within ROADM's  |
-|                          |           | line degrees.                               |
-|                          |           |                                             |
-|                          |           | If no booster should be placed on a degree, |
-|                          |           | insert a ``Fused`` node on the degree       |
-|                          |           | output.                                     |
-+--------------------------+-----------+---------------------------------------------+
-
-The ``SpectralInformation`` object can be configured as follows. The user can
-only modify the value of existing parameters. It defines a spectrum of N
-identical carriers. While the code libraries allow for different carriers and
-power levels, the current user parametrization only allows one carrier type and
-one power/channel definition.
-
-+----------------------+-----------+-------------------------------------------+
-| field                |   type    | description                               |
-+======================+===========+===========================================+
-| ``f_min``,           | (number)  | In Hz. Carrier min max excursion.         |
-| ``f_max``            |           |                                           |
-+----------------------+-----------+-------------------------------------------+
-| ``baud_rate``        | (number)  | In Hz. Simulated baud rate.               |
-+----------------------+-----------+-------------------------------------------+
-| ``spacing``          | (number)  | In Hz. Carrier spacing.                   |
-+----------------------+-----------+-------------------------------------------+
-| ``roll_off``         | (number)  | Not used.                                 |
-+----------------------+-----------+-------------------------------------------+
-| ``tx_osnr``          | (number)  | In dB. OSNR out from transponder.         |
-+----------------------+-----------+-------------------------------------------+
-| ``power_dbm``        | (number)  | Reference channel power. In gain mode     |
-|                      |           | (see spans/power_mode = false), all gain  |
-|                      |           | settings are offset w/r/t this reference  |
-|                      |           | power. In power mode, it is the           |
-|                      |           | reference power for                       |
-|                      |           | Spans/delta_power_range_db. For example,  |
-|                      |           | if delta_power_range_db = `[0,0,0]`, the  |
-|                      |           | same power=power_dbm is launched in every |
-|                      |           | spans. The network design is performed    |
-|                      |           | with the power_dbm value: even if a       |
-|                      |           | power sweep is defined (see after) the    |
-|                      |           | design is not repeated.                   |
-+----------------------+-----------+-------------------------------------------+
-| ``power_range_db``   | (number)  | Power sweep excursion around power_dbm.   |
-|                      |           | It is not the min and max channel power   |
-|                      |           | values! The reference power becomes:      |
-|                      |           | power_range_db + power_dbm.               |
-+----------------------+-----------+-------------------------------------------+
-| ``sys_margins``      | (number)  | In dB. Added margin on min required       |
-|                      |           | transceiver OSNR.                         |         
-+----------------------+-----------+-------------------------------------------+
-
-The `transmission_main_example.py <examples/transmission_main_example.py>`_ script propagates a spectrum of channels at 32 Gbaud, 50 GHz spacing and 0 dBm/channel. 
 Launch power can be overridden by using the ``--power`` argument.
 Spectrum information is not yet parametrized but can be modified directly in the ``eqpt_config.json`` (via the ``SpectralInformation`` -SI- structure) to accommodate any baud rate or spacing.
 The number of channel is computed based on ``spacing`` and ``f_min``, ``f_max`` values.
 
 An experimental support for Raman amplification is available:
 
-.. code-block:: shell
+.. code-block:: shell-session
 
-     $ ./examples/transmission_main_example.py \
+     $ gnpy-transmission-example \
-       examples/raman_edfa_example_network.json \
+       $(gnpy-example-data)/raman_edfa_example_network.json \
-       --sim examples/sim_params.json --show-channels
+       --sim $(gnpy-example-data)/sim_params.json --show-channels
 
-Configuration of Raman pumps (their frequencies, power and pumping direction) is done via the `RamanFiber element in the network topology <examples/raman_edfa_example_network.json>`_.
+Configuration of Raman pumps (their frequencies, power and pumping direction) is done via the `RamanFiber element in the network topology <gnpy/example-data/raman_edfa_example_network.json>`_.
-General numeric parameters for simulaiton control are provided in the `examples/sim_params.json <examples/sim_params.json>`_.
+General numeric parameters for simulaiton control are provided in the `gnpy/example-data/sim_params.json <gnpy/example-data/sim_params.json>`_.
 
-Use `examples/path_requests_run.py <examples/path_requests_run.py>`_ to run multiple optimizations as follows:
+Use ``gnpy-path-request`` to request several paths at once:
 
-.. code-block:: shell
+.. code-block:: shell-session
 
-     $ python path_requests_run.py -h
+     $ cd $(gnpy-example-data)
-     Usage: path_requests_run.py [-h] [-v] [-o OUTPUT] [network_filename] [service_filename] [eqpt_filename]
+     $ gnpy-path-request -o output_file.json \
+       meshTopologyExampleV2.xls meshTopologyExampleV2_services.json
 
-The ``network_filename`` and ``service_filename`` can be an XLS or JSON file. The ``eqpt_filename`` must be a JSON file.
+This program operates on a network topology (`JSON <docs/json.rst>`__ or `Excel <docs/excel.rst>`__ format), processing the list of service requests (JSON or XLS again).
+The service requests and reply formats are based on the `draft-ietf-teas-yang-path-computation-01 <https://tools.ietf.org/html/draft-ietf-teas-yang-path-computation-01>`__ with custom extensions (e.g., for transponder modes).
+An example of the JSON input is provided in file `service-template.json`, while results are shown in `path_result_template.json`.
 
-To see an example of it, run:
+Important note: ``gnpy-path-request`` is not a network dimensionning tool: each service does not reserve spectrum, or occupy ressources such as transponders. It only computes path feasibility assuming the spectrum (between defined frequencies) is loaded with "nb of channels" spaced by "spacing" values as specified in the system parameters input in the service file, each cannel having the same characteristics in terms of baudrate, format,... as the service transponder. The transceiver element acts as a "logical starting/stopping point" for the spectral information propagation. At that point it is not meant to represent the capacity of add drop ports.
+As a result transponder type is not part of the network info. it is related to the list of services requests.
 
-.. code-block:: shell
+The current version includes a spectrum assigment features that enables to compute a candidate spectrum assignment for each service based on a first fit policy. Spectrum is assigned based on service specified spacing value, path_bandwidth value and selected mode for the transceiver. This spectrum assignment includes a basic capacity planning capability so that the spectrum resource is limited by the frequency min and max values defined for the links. If the requested services reach the link spectrum capacity, additional services feasibility are computed but marked as blocked due to spectrum reason.
 
-    $ cd examples
+REST API (experimental)
-    $ python path_requests_run.py meshTopologyExampleV2.xls meshTopologyExampleV2_services.json eqpt_config.json -o output_file.json
+-----------------------
+``gnpy`` provides an experimental api for requesting several paths at once. It is based on Flask server.
+You can run it through command line or Docker.
 
-This program requires a list of connections to be estimated and the equipment
+.. code-block:: shell-session
-library. The program computes performances for the list of services (accepts
+
-JSON or Excel format) using the same spectrum propagation modules as
+     $ gnpy-rest
-``transmission_main_example.py``. Explanation on the Excel template is provided in
+
-the `Excel_userguide.rst <Excel_userguide.rst#service-sheet>`_. Template for
+.. code-block:: shell-session
-the JSON format can be found here: `service-template.json
+
-<service-template.json>`_.
+    $ docker run -p 8080:8080 -it emmanuelledelfour/gnpy-experimental:candi-1.1 gnpy-rest
+
+When starting the api server will aks for an encryption/decryption key. This key i used to encrypt equipment file when using /api/v1/equipments endpoint.
+This key is a Fernet key and can be generated this way:
+
+.. code-block:: python
+
+from cryptography.fernet import Fernet
+Fernet.generate_key()
+
+
+After typing the key, you can detach the container by typing ^P^Q.
+After starting the api server, you can launch a request
+
+.. code-block:: shell-session
+
+    $ curl -v -X POST -H "Content-Type: application/json" -d @<PATH_TO_JSON_REQUEST_FILE> https://localhost:8080/api/v1/path-computation -k
+
+TODO: api documentation, unit tests, real WSGI server with trusted certificates
 
 Contributing
 ------------
@@ -550,7 +173,8 @@ To get involved, please contact Jan Kundrát
 
 See the `Onboarding Guide
 <https://github.com/Telecominfraproject/gnpy/wiki/Onboarding-Guide>`_ for
-specific details on code contributions.
+specific details on code contributions, or just `upload patches to our Gerrit
+<https://review.gerrithub.io/Documentation/intro-gerrit-walkthrough-github.html>`_.
 
 See `AUTHORS.rst <AUTHORS.rst>`_ for past and present contributors.
 
@@ -591,21 +215,42 @@ working group set out to disrupt the planning landscape by providing an open
 source simulation model which can be used freely across multiple vendor
 implementations.
 
-.. |docs| image:: https://readthedocs.org/projects/gnpy/badge/?version=develop
+.. |docs| image:: https://readthedocs.org/projects/gnpy/badge/?version=master
-  :target: http://gnpy.readthedocs.io/en/develop/?badge=develop
+  :target: http://gnpy.readthedocs.io/en/master/?badge=master
   :alt: Documentation Status
   :scale: 100%
 
-.. |build| image:: https://travis-ci.com/Telecominfraproject/oopt-gnpy.svg?branch=develop
+.. |travis| image:: https://travis-ci.com/Telecominfraproject/oopt-gnpy.svg?branch=master
   :target: https://travis-ci.com/Telecominfraproject/oopt-gnpy
-  :alt: Build Status
+  :alt: Build Status via Travis CI
   :scale: 100%
 
-.. |doi| image:: https://zenodo.org/badge/96894149.svg
+.. |doi| image:: https://zenodo.org/badge/DOI/10.5281/zenodo.3458319.svg
-  :target: https://zenodo.org/badge/latestdoi/96894149
+  :target: https://doi.org/10.5281/zenodo.3458319
   :alt: DOI
   :scale: 100%
 
+.. |contributors| image:: https://img.shields.io/github/contributors-anon/Telecominfraproject/oopt-gnpy
+  :target: https://github.com/Telecominfraproject/oopt-gnpy/graphs/contributors
+  :alt: Code Contributors via GitHub
+  :scale: 100%
+
+.. |codacy-quality| image:: https://img.shields.io/lgtm/grade/python/github/Telecominfraproject/oopt-gnpy
+  :target: https://lgtm.com/projects/g/Telecominfraproject/oopt-gnpy/
+  :alt: Code Quality via LGTM.com
+  :scale: 100%
+
+.. |codecov| image:: https://img.shields.io/codecov/c/github/Telecominfraproject/oopt-gnpy
+  :target: https://codecov.io/gh/Telecominfraproject/oopt-gnpy
+  :alt: Code Coverage via codecov
+  :scale: 100%
+
+.. |pypi| image:: https://img.shields.io/pypi/v/gnpy
+  :target: https://pypi.org/project/gnpy/
+  :alt: Install via PyPI
+  :scale: 100%
+
+
 TIP OOPT/PSE & PSE WG Charter
 -----------------------------
 

bindep.txt

@@ -0,0 +1 @@
+graphviz

docs/concepts.rst

@@ -0,0 +1,269 @@
+.. _concepts:
+
+Simulating networks with GNPy
+=============================
+
+Running simulations with GNPy requires three pieces of information:
+
+- the :ref:`network topology<concepts-topology>`, which describes how the network looks like, what are the fiber lengths, what amplifiers are used, etc.,
+- the :ref:`equipment library<concepts-equipment>`, which holds machine-readable datasheets of the equipment used in the network,
+- the :ref:`simulation options<concepts-simulation>` holding instructions about what to simulate, and under which conditions.
+
+.. _concepts-topology:
+
+Network Topology
+----------------
+
+The *topology* acts as a "digital self" of the simulated network.
+When given a network topology, GNPy can either run a specific simulation as-is, or it can *optimize* the topology before performing the simulation.
+
+A network topology for GNPy is often a generic, mesh network.
+This enables GNPy to take into consideration the current spectrum allocation as well as availability and resiliency considerations.
+When the time comes to run a particular *propagation* of a signal and its impairments are computed, though, a linear path through the network is used.
+For this purpose, the *path* through the network refers to an ordered, acyclic sequence of *nodes* that are processed.
+This path is directional, and all "GNPy elements" along the path match the unidirectional part of a real-world network equipment.
+
+.. note::
+  In practical terms, an amplifier in GNPy refers to an entity with a single input port and a single output port.
+  A real-world inline EDFA enclosed in a single chassis will be therefore represented as two GNPy-level amplifiers.
+
+The network topology contains not just the physical topology of the network, but also references to the :ref:`equipment library<concepts-equipment>` and a set of *operating parameters* for each entity.
+These parameters include the **fiber length** of each fiber, the connector **attenutation losses**, or an amplifier's specific **gain setting**.
+
+.. _complete-vs-incomplete:
+
+Fully Specified vs. Partially Designed Networks
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+Let's consider a simple triangle topology with three :abbr:`PoPs (Points of Presence)` covering three cities:
+
+.. graphviz::
+  :layout: neato
+  :align: center
+
+  graph "High-level topology with three PoPs" {
+    A -- B
+    B -- C
+    C -- A
+  }
+
+In the real world, each city would probably host a ROADM and some transponders:
+
+.. graphviz::
+  :layout: neato
+  :align: center
+
+  graph "Simplified topology with transponders" {
+    "ROADM A" [pos="2,2!"]
+    "ROADM B" [pos="4,2!"]
+    "ROADM C" [pos="3,1!"]
+    "Transponder A" [shape=box, pos="0,2!"]
+    "Transponder B" [shape=box, pos="6,2!"]
+    "Transponder C" [shape=box, pos="3,0!"]
+
+    "ROADM A" -- "ROADM B"
+    "ROADM B" -- "ROADM C"
+    "ROADM C" -- "ROADM A"
+
+    "Transponder A" -- "ROADM A"
+    "Transponder B" -- "ROADM B"
+    "Transponder C" -- "ROADM C"
+  }
+
+GNPy simulation works by propagating the optical signal over a sequence of elements, which means that one has to add some preamplifiers and boosters.
+The amplifiers are, by definition, unidirectional, so the graph becomes quite complex:
+
+.. _topo-roadm-preamp-booster:
+
+.. graphviz::
+  :layout: neato
+  :align: center
+
+  digraph "Preamps and boosters are explicitly modeled in GNPy" {
+    "ROADM A" [pos="2,4!"]
+    "ROADM B" [pos="6,4!"]
+    "ROADM C" [pos="4,0!"]
+    "Transponder A" [shape=box, pos="1,5!"]
+    "Transponder B" [shape=box, pos="7,5!"]
+    "Transponder C" [shape=box, pos="4,-1!"]
+
+    "Transponder A" -> "ROADM A"
+    "Transponder B" -> "ROADM B"
+    "Transponder C" -> "ROADM C"
+    "ROADM A" -> "Transponder A"
+    "ROADM B" -> "Transponder B"
+    "ROADM C" -> "Transponder C"
+
+    "Booster A C" [shape=triangle, orientation=-150, fixedsize=true, width=0.5, height=0.5, pos="2.2,3.2!", color=red, label=""]
+    "Preamp A C" [shape=triangle, orientation=0, fixedsize=true, width=0.5, height=0.5, pos="1.5,3.0!", color=red, label=""]
+    "ROADM A" -> "Booster A C"
+    "Preamp A C" -> "ROADM A"
+
+    "Booster A B" [shape=triangle, orientation=-90, fixedsize=true, width=0.5, height=0.5, pos="3,4.3!", color=red, fontcolor=red, labelloc=b, label="\N\n\n"]
+    "Preamp A B" [shape=triangle, orientation=90, fixedsize=true, width=0.5, height=0.5, pos="3,3.6!", color=red, fontcolor=red, labelloc=t, label="\n        \N"]
+    "ROADM A" -> "Booster A B"
+    "Preamp A B" -> "ROADM A"
+
+    "Booster C B" [shape=triangle, orientation=-30, fixedsize=true, width=0.5, height=0.5, pos="4.7,0.9!", color=red, label=""]
+    "Preamp C B" [shape=triangle, orientation=120, fixedsize=true, width=0.5, height=0.5, pos="5.4,0.7!", color=red, label=""]
+    "ROADM C" -> "Booster C B"
+    "Preamp C B" -> "ROADM C"
+
+    "Booster C A" [shape=triangle, orientation=30, fixedsize=true, width=0.5, height=0.5, pos="2.6,0.7!", color=red, label=""]
+    "Preamp C A" [shape=triangle, orientation=-30, fixedsize=true, width=0.5, height=0.5, pos="3.3,0.9!", color=red, label=""]
+    "ROADM C" -> "Booster C A"
+    "Preamp C A" -> "ROADM C"
+
+    "Booster B A" [shape=triangle, orientation=90, fixedsize=true, width=0.5, height=0.5, pos="5,3.6!", labelloc=t, color=red, fontcolor=red, label="\n\N        "]
+    "Preamp B A" [shape=triangle, orientation=-90, fixedsize=true, width=0.5, height=0.5, pos="5,4.3!", labelloc=b, color=red, fontcolor=red, label="\N\n\n"]
+    "ROADM B" -> "Booster B A"
+    "Preamp B A" -> "ROADM B"
+
+    "Booster B C" [shape=triangle, orientation=-180, fixedsize=true, width=0.5, height=0.5, pos="6.5,3.0!", color=red, label=""]
+    "Preamp B C" [shape=triangle, orientation=-20, fixedsize=true, width=0.5, height=0.5, pos="5.8,3.2!", color=red, label=""]
+    "ROADM B" -> "Booster B C"
+    "Preamp B C" -> "ROADM B"
+
+    "Booster A C" -> "Preamp C A"
+    "Booster A B" -> "Preamp B A"
+    "Booster C A" -> "Preamp A C"
+    "Booster C B" -> "Preamp B C"
+    "Booster B C" -> "Preamp C B"
+    "Booster B A" -> "Preamp A B"
+  }
+
+In many regions, the ROADMs are not placed physically close to each other, so the long-haul fiber links (:abbr:`OMS (Optical Multiplex Section)`) are split into individual spans (:abbr:`OTS (Optical Transport Section)`) by in-line amplifiers, resulting in an even more complicated topology graphs:
+
+.. graphviz::
+  :layout: neato
+  :align: center
+
+  digraph "A subset of a real topology with inline amplifiers" {
+    "ROADM A" [pos="2,4!"]
+    "ROADM B" [pos="6,4!"]
+    "ROADM C" [pos="4,-3!"]
+    "Transponder A" [shape=box, pos="1,5!"]
+    "Transponder B" [shape=box, pos="7,5!"]
+    "Transponder C" [shape=box, pos="4,-4!"]
+
+    "Transponder A" -> "ROADM A"
+    "Transponder B" -> "ROADM B"
+    "Transponder C" -> "ROADM C"
+    "ROADM A" -> "Transponder A"
+    "ROADM B" -> "Transponder B"
+    "ROADM C" -> "Transponder C"
+
+    "Booster A C" [shape=triangle, orientation=-166, fixedsize=true, width=0.5, height=0.5, pos="2.2,3.2!", label=""]
+    "Preamp A C" [shape=triangle, orientation=0, fixedsize=true, width=0.5, height=0.5, pos="1.5,3.0!", label=""]
+    "ROADM A" -> "Booster A C"
+    "Preamp A C" -> "ROADM A"
+
+    "Booster A B" [shape=triangle, orientation=-90, fixedsize=true, width=0.5, height=0.5, pos="3,4.3!", label=""]
+    "Preamp A B" [shape=triangle, orientation=90, fixedsize=true, width=0.5, height=0.5, pos="3,3.6!", label=""]
+    "ROADM A" -> "Booster A B"
+    "Preamp A B" -> "ROADM A"
+
+    "Booster C B" [shape=triangle, orientation=-30, fixedsize=true, width=0.5, height=0.5, pos="4.7,-2.1!", label=""]
+    "Preamp C B" [shape=triangle, orientation=10, fixedsize=true, width=0.5, height=0.5, pos="5.4,-2.3!", label=""]
+    "ROADM C" -> "Booster C B"
+    "Preamp C B" -> "ROADM C"
+
+    "Booster C A" [shape=triangle, orientation=20, fixedsize=true, width=0.5, height=0.5, pos="2.6,-2.3!", label=""]
+    "Preamp C A" [shape=triangle, orientation=-30, fixedsize=true, width=0.5, height=0.5, pos="3.3,-2.1!", label=""]
+    "ROADM C" -> "Booster C A"
+    "Preamp C A" -> "ROADM C"
+
+    "Booster B A" [shape=triangle, orientation=90, fixedsize=true, width=0.5, height=0.5, pos="5,3.6!", label=""]
+    "Preamp B A" [shape=triangle, orientation=-90, fixedsize=true, width=0.5, height=0.5, pos="5,4.3!", label=""]
+    "ROADM B" -> "Booster B A"
+    "Preamp B A" -> "ROADM B"
+
+    "Booster B C" [shape=triangle, orientation=-180, fixedsize=true, width=0.5, height=0.5, pos="6.5,3.0!", label=""]
+    "Preamp B C" [shape=triangle, orientation=-20, fixedsize=true, width=0.5, height=0.5, pos="5.8,3.2!", label=""]
+    "ROADM B" -> "Booster B C"
+    "Preamp B C" -> "ROADM B"
+
+    "Inline A C 1" [shape=triangle, orientation=-166, fixedsize=true, width=0.5, pos="2.4,2.2!", label="                             \N", color=red, fontcolor=red]
+    "Inline A C 2" [shape=triangle, orientation=-166, fixedsize=true, width=0.5, pos="2.6,1.2!", label="                             \N", color=red, fontcolor=red]
+    "Inline A C 3" [shape=triangle, orientation=-166, fixedsize=true, width=0.5, pos="2.8,0.2!", label="                             \N", color=red, fontcolor=red]
+    "Inline A C n" [shape=triangle, orientation=-166, fixedsize=true, width=0.5, pos="3.0,-1.1!", label="                             \N", color=red, fontcolor=red]
+
+    "Booster A C" -> "Inline A C 1"
+    "Inline A C 1" -> "Inline A C 2"
+    "Inline A C 2" -> "Inline A C 3"
+    "Inline A C 3" -> "Inline A C n" [style=dotted]
+    "Inline A C n" -> "Preamp C A"
+    "Booster A B" -> "Preamp B A" [style=dotted]
+    "Booster C A" -> "Preamp A C" [style=dotted]
+    "Booster C B" -> "Preamp B C" [style=dotted]
+    "Booster B C" -> "Preamp C B" [style=dotted]
+    "Booster B A" -> "Preamp A B" [style=dotted]
+  }
+
+In such networks, GNPy's autodesign features becomes very useful.
+It is possible to connect ROADMs via "tentative links" which will be replaced by a sequence of actual fibers and specific amplifiers.
+In other cases where the location of amplifier huts is already known, but the specific EDFA models have not yet been decided, one can put in amplifier placeholders and let GNPy assign the best amplifier.
+
+.. _concepts-equipment:
+
+The Equipment Library
+---------------------
+
+In order to produce an accurate simulation, GNPy needs to know the physical properties of each entity which affects the optical signal.
+Entries in the equipment library correspond to actual real-world, tangible entities.
+Unlike a typical :abbr:`NMS (Network Management System)`, GNPy considers not just the active :abbr:`NEs (Network Elements)` such as amplifiers and :abbr:`ROADMs (Reconfigurable Optical Add/Drop Multiplexers)`, but also the passive ones, such as the optical fiber.
+
+As the signal propagates through the network, the largest source of optical impairments is the noise introduced from amplifiers.
+An accurate description of the :abbr:`EDFA (Erbium-Doped Fiber Amplifier)` and especially its noise characteristics is required.
+GNPy describes this property in terms of the **Noise Figure (NF)** of an amplifier model as a function of its operating point.
+
+The amplifiers compensate power losses induced on the signal in the optical fiber.
+The linear losses, however, are just one phenomenon of a multitude of effects that affect the signals in a long fiber run.
+While a more detailed description is available :ref:`in the literature<physical-model>`, for the purpose of the equipment library, the description of the *optical fiber* comprises its **linear attenutation coefficient**, a set of parameters for the **Raman effect**, optical **dispersion**, etc.
+
+Signals are introduced into the network via *transponders*.
+The set of parameters that are required describe the physical properties of each supported *mode* of the transponder, including its **symbol rate**, spectral **width**, etc.
+
+In the junctions of the network, *ROADMs* are used for spectrum routing.
+GNPy currently does not take into consideration the spectrum filtering penalties of the :abbr:`WSSes (Wavelength Selective Switches)`, but the equipment library nonetheless contains a list of required parameters, such as the attenuation options, so that the network can be properly simulated.
+
+.. _concepts-nf-model:
+
+Amplifier Noise Figure Models
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+One of the key parameters of an amplifier is the method to use for computing the Noise Figure (NF).
+GNPy supports several different noise models with varying level of accuracy.
+When in doubt, contact your vendor's technical support and ask them to :ref:`contribute their equipment descriptions<extending-edfa>` to GNPy.
+
+The most accurate noise models describe the resulting NF of an EDFA as a third-degree polynomial.
+GNPy understands polynomials as a NF-yielding function of the :ref:`gain difference from the optimal gain<ext-nf-model-polynomial-NF>`, or as a function of the input power resulting in an :ref:`incremental OSNR as used in OpenROADM<ext-nf-model-polynomial-OSNR-OpenROADM>`.
+For scenarios where the vendor has not yet contributed an accurate EDFA NF description to GNPy, it is possible to approximate the characteristics via an operator-focused, min-max NF model.
+
+.. _nf-model-min-max-NF:
+
+Min-max NF
+**********
+
+This is an operator-focused model where performance is defined by the *minimal* and *maximal NF*.
+These are especially suited to model a dual-coil EDFA with a VOA in between.
+In these amplifiers, the minimal NF is achieved when the EDFA operates at its maximal (and usually optimal, in terms of flatness) gain.
+The worst (maximal) NF applies  when the EDFA operates at its minimal gain.
+
+This model is suitable for use when the vendor has not provided a more accurate performance description of the EDFA.
+
+Raman Approximation
+*******************
+
+While GNPy is fully Raman-aware, under certain scenarios it is useful to be able to run a simulation without an accurate Raman description.
+For these purposes the :ref:`polynomial NF<ext-nf-model-polynomial-NF>` model with :math:`\text{a} = \text{b} = \text{c} = 0`, and :math:`\text{d} = NF` can be used.
+
+.. _concepts-simulation:
+
+Simulation
+----------
+
+When the network model has been instantiated and the physical properties and operational settings of the actual physical devices are known, GNPy can start simulating how the signal propagate through the optical fiber.
+
+This set of input parameters include options such as the *spectrum allocation*, i.e., the number of channels and their spacing.
+Various strategies for network optimization can be provided as well.

docs/conf.py

@@ -31,8 +31,12 @@ sys.path.insert(0, os.path.abspath('../'))
 # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
 # ones.
 extensions = ['sphinx.ext.autodoc',
-    'sphinx.ext.mathjax',
+              'sphinx.ext.mathjax',
-    'sphinx.ext.githubpages','sphinxcontrib.bibtex']
+              'sphinx.ext.githubpages',
+              'sphinxcontrib.bibtex',
+              'pbr.sphinxext',
+              'sphinx.ext.graphviz',
+              ]
 
 # Add any paths that contain templates here, relative to this directory.
 templates_path = ['_templates']
@@ -48,17 +52,8 @@ master_doc = 'index'
 
 # General information about the project.
 project = 'gnpy'
-copyright = '2018, Telecom InfraProject - OOPT PSE Group'
+copyright = '2018 - 2021, Telecom Infra Project - OOPT PSE Group'
-author = 'Telecom InfraProject - OOPT PSE Group'
+author = 'Telecom Infra Project - OOPT PSE Group'
-
-# The version info for the project you're documenting, acts as replacement for
-# |version| and |release|, also used in various other places throughout the
-# built documents.
-#
-# The short X.Y version.
-version = '0.1'
-# The full version, including alpha/beta/rc tags.
-release = '0.1'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.
@@ -87,8 +82,17 @@ todo_include_todos = False
 on_rtd = os.environ.get('READTHEDOCS') == 'True'
 if on_rtd:
     html_theme = 'default'
+    html_theme_options = {
+        'logo_only': True,
+    }
 else:
     html_theme = 'alabaster'
+    html_theme_options = {
+        'logo': 'images/GNPy-logo.png',
+        'logo_name': False,
+    }
+
+html_logo = 'images/GNPy-logo.png'
 
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
@@ -99,7 +103,7 @@ else:
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ['_static']
+html_static_path = []
 
 # Custom sidebar templates, must be a dictionary that maps document names
 # to template names.
@@ -148,7 +152,7 @@ latex_elements = {
 #  author, documentclass [howto, manual, or own class]).
 latex_documents = [
     (master_doc, 'gnpy.tex', 'gnpy Documentation',
-     'Telecom InfraProject - OOPT PSE Group', 'manual'),
+     'Telecom Infra Project - OOPT PSE Group', 'manual'),
 ]
 
 
@@ -173,4 +177,11 @@ texinfo_documents = [
      'Miscellaneous'),
 ]
 
-autodoc_default_flags = ['members', 'undoc-members', 'private-members', 'show-inheritance']
+autodoc_default_options = {
+    'members': True,
+    'undoc-members': True,
+    'private-members': True,
+    'show-inheritance': True,
+}
+
+graphviz_output_format = 'svg'

docs/excel.rst

@@ -1,8 +1,7 @@
+Excel (XLS, XLSX) input files
+=============================
 
-How to prepare the Excel input file
+``gnpy-transmission-example`` gives the possibility to use an excel input file instead of a json file. The program then will generate the corresponding json file for you.
------------------------------------
-
-`examples/transmission_main_example.py <examples/transmission_main_example.py>`_ gives the possibility to use an excel input file instead of a json file. The program then will generate the corresponding json file for you.
 
 The file named 'meshTopologyExampleV2.xls' is an example.
 
@@ -16,6 +15,8 @@ In order to work the excel file MUST contain at least 2 sheets:
 - Eqt
 - Service
 
+.. _excel-nodes-sheet:
+
 Nodes sheet
 -----------
 
@@ -34,7 +35,7 @@ Each line represents a 'node' (ROADM site or an in line amplifier site ILA or a
   - If filled, it can take "ROADM", "FUSED" or "ILA" values. If another string is used, it will be considered as not filled. FUSED means that ingress and egress spans will be fused together.  
 
 - *State*, *Country*, *Region* are not mandatory.
-  "Region" is a holdover from the CORONET topology reference file `CORONET_Global_Topology.xls <examples/CORONET_Global_Topology.xls>`_. CORONET separates its network into geographical regions (Europe, Asia, Continental US.) This information is not used by gnpy.
+  "Region" is a holdover from the CORONET topology reference file `CORONET_Global_Topology.xlsx <gnpy/example-data/CORONET_Global_Topology.xlsx>`_. CORONET separates its network into geographical regions (Europe, Asia, Continental US.) This information is not used by gnpy.
 
 - *Longitude*, *Latitude* are not mandatory. If filled they should contain numbers.
 
@@ -44,6 +45,8 @@ Each line represents a 'node' (ROADM site or an in line amplifier site ILA or a
 **There MUST NOT be empty line(s) between two nodes lines**
 
 
+.. _excel-links-sheet:
+
 Links sheet
 -----------
 
@@ -80,11 +83,11 @@ and a fiber span from node3 to node6::
 
   - If filled it MUST contain numbers. If empty it is replaced by a default "80" km value. 
   - If value is below 150 km, it is considered as a single (bidirectional) fiber span.
-  - If value is over 150 km the `transmission_main_example.py <examples/transmission_main_example.py>`_ program will automatically suppose that intermediate span description are required and will generate fiber spans elements with "_1","_2", ... trailing strings which are not visible in the json output. The reason for the splitting is that current edfa usually do not support large span loss. The current assumption is that links larger than 150km will require intermediate amplification. This value will be revisited when Raman amplification is added”
+  - If value is over 150 km the `gnpy-transmission-example`` program will automatically suppose that intermediate span description are required and will generate fiber spans elements with "_1","_2", ... trailing strings which are not visible in the json output. The reason for the splitting is that current edfa usually do not support large span loss. The current assumption is that links larger than 150km will require intermediate amplification. This value will be revisited when Raman amplification is added”
 
 - **Fiber type** is not mandatory. 
 
-  If filled it must contain types listed in `eqpt_config.json <examples/eqpt_config.json>`_ in "Fiber" list "type_variety".
+  If filled it must contain types listed in `eqpt_config.json <gnpy/example-data/eqpt_config.json>`_ in "Fiber" list "type_variety".
   If not filled it takes "SSMF" as default value.
 
 - **Lineic att** is not mandatory. 
@@ -113,18 +116,22 @@ and a fiber span from node3 to node6::
 
 (in progress)
 
+.. _excel-equipment-sheet:
+
 Eqpt sheet 
 ----------
 
-Eqt sheet is optional. It lists the amplifiers types and characteristics on each degree of the *Node A* line.
+The equipment sheet (named "Eqpt") is optional.
-Eqpt sheet must contain twelve columns::
+If provided, it specifies types of boosters and preamplifiers for all ROADM degrees of all ROADM nodes, and for all ILA nodes.
 
-                   <--           east cable from a to z        --> <--        west from z to a                 -->
+This sheet contains twelve columns::
-  Node A ; Node Z ; amp type ; att_in ; amp gain ; tilt ; att_out ; amp type ; att_in ; amp gain ; tilt ; att_out
 
-If the sheet is present, it MUST have as many lines as egress directions of ROADMs defined in Links Sheet. 
+                   <--           east cable from a to z                  --> <--        west from z to a                          -->
+  Node A ; Node Z ; amp type ; att_in ; amp gain ; tilt ; att_out ; delta_p ; amp type ; att_in ; amp gain ; tilt ; att_out ; delta_p
 
-For example, consider the following list of links (A,B and C being a ROADM and amp# ILAs)
+If the sheet is present, it MUST have as many lines as there are egress directions of ROADMs defined in Links Sheet, and all ILAs.
+
+For example, consider the following list of links (A, B and C being a ROADM and amp# ILAs):
 
 ::
 
@@ -136,8 +143,8 @@ For example, consider the following list of links (A,B and C being a ROADM and a
 
 then Eqpt sheet should contain:
   - one line for each ILAs: amp1, amp2, amp3 
-  - one line for each degree 1 ROADMs B and C  
+  - one line for each one-degree ROADM (B and C in this example)
-  - two lines for ROADM A  which is a degree 2 ROADM 
+  - two lines for each two-degree ROADM (just the ROADM A)
 
 ::
 
@@ -150,11 +157,11 @@ then Eqpt sheet should contain:
   C    - amp3
 
 
-In case you already have filled Nodes and Links sheets `create_eqpt_sheet.py <examples/create_eqpt_sheet.py>`_  can be used to automatically create a template for the mandatory entries of the list.
+In case you already have filled Nodes and Links sheets `create_eqpt_sheet.py <gnpy/example-data/create_eqpt_sheet.py>`_  can be used to automatically create a template for the mandatory entries of the list.
 
 .. code-block:: shell
 
-    $ cd examples
+    $ cd $(gnpy-example-data)
     $ python create_eqpt_sheet.py meshTopologyExampleV2.xls
 
 This generates a text file meshTopologyExampleV2_eqt_sheet.txt  whose content can be directly copied into the Eqt sheet of the excel file. The user then can fill the values in the rest of the columns.
@@ -167,7 +174,7 @@ This generates a text file meshTopologyExampleV2_eqt_sheet.txt  whose content ca
 - **Node Z** is mandatory. It is the egress direction from the *Node A* site. Multiple Links between the same Node A and NodeZ is not supported.
 
 - **amp type** is not mandatory. 
-  If filled it must contain types listed in `eqpt_config.json <examples/eqpt_config.json>`_ in "Edfa" list "type_variety".
+  If filled it must contain types listed in `eqpt_config.json <gnpy/example-data/eqpt_config.json>`_ in "Edfa" list "type_variety".
   If not filled it takes "std_medium_gain" as default value.
   If filled with fused, a fused element with 0.0 dB loss will be placed instead of an amplifier. This might be used to avoid booster amplifier on a ROADM direction.
 
@@ -175,19 +182,23 @@ This generates a text file meshTopologyExampleV2_eqt_sheet.txt  whose content ca
   If not filled, it will be determined with design rules in the convert.py file.
   If filled, it must contain positive numbers.
 
-- *att_in* and *att_out* are not mandatory and are not used yet. They are the value of the attenautor at input and output of amplifier (in dB).
+- *att_in* and *att_out* are not mandatory and are not used yet. They are the value of the attenuator at input and output of amplifier (in dB).
   If filled they must contain positive numbers.
 
 - *tilt* --TODO--
 
+- **delta_p**, in dBm,  is not mandatory. If filled it is used to set the output target power per channel at the output of the amplifier, if power_mode is True. The output power is then set to power_dbm + delta_power.
+
 # to be completed #
 
 (in progress)
 
+.. _excel-service-sheet:
+
 Service sheet 
 -------------
 
-Service sheet is optional. It lists the services for which path and feasibility must be computed with path_requests_run.py.
+Service sheet is optional. It lists the services for which path and feasibility must be computed with ``gnpy-path-request``.
 
 Service sheet must contain 11 columns::  
 
@@ -216,36 +227,4 @@ Service sheet must contain 11 columns::
   - path: is the set of ROADM nodes that must be used by the path. It must contain the list of ROADM names that the path must cross. TODO : only ROADM nodes are accepted in this release. Relax this with any type of nodes. If filled it must contain ROADM ids separated by ' | '. Exact names are required. 
   - is loose?  'no' value means that the list of nodes should be strictly followed, while any other value means that the constraint may be relaxed if the node is not reachable. 
 
-- ** path bandwidth** is optional. It is the amount of capacity required between source and destination in Gbit/s. Default value is 0.0 Gbit/s. 
+- **path bandwidth** is mandatory. It is the amount of capacity required between source and destination in Gbit/s. Value should be positive (non zero). It is used to compute the amount of required spectrum for the service.  
-
-path_requests_run.py
-------------------------
-
-**Usage**: path_requests_run.py [-h] [-v] [-o OUTPUT]
-                            [network_filename xls or json] [service_filename xls or json] [eqpt_filename json]
-
-.. code-block:: shell
-
-    $ cd examples
-    $ python path_requests_run.py meshTopologyExampleV2.xls service_file.json eqpt_file -o output_file.json
-
-A function that computes performances for a list of services provided in the service file (accepts json or excel format.
-
-if the service <file.xls> is in xls format, path_requests_run.py converts it to a json file <file_services.json> following the Yang model for requesting Path Computation defined in `draft-ietf-teas-yang-path-computation-01.txt <https://www.ietf.org/id/draft-ietf-teas-yang-path-computation-01.pdf>`_. For PSE use, additional fields with trx type and mode have been added to the te-bandwidth field. 
-
-A template for the json file can be found here: `service_template.json <service_template.json>`_
-
-
-If no output file is given, the computation is shown on standard output for demo.
-If a file is specified with the optional -o argument, the result of the computation is converted into a json format following  the Yang model for requesting Path Computation defined in `draft-ietf-teas-yang-path-computation-01.txt <https://www.ietf.org/id/draft-ietf-teas-yang-path-computation-01.pdf>`_. TODO: verify that this implementation is correct + give feedback to ietf on what is missing for our specific application.
-
-A template for the result of computation json file can be found here: `path_result_template.json <path_result_template.json>`_
-
-Important note: path_requests_run.py is not a network dimensionning tool : each service does not reserve spectrum, or occupy ressources such as transponders. It only computes path feasibility assuming the spectrum (between defined frequencies) is loaded with "nb of channels" spaced by "spacing" values as specified in the system parameters input in the service file, each cannel having the same characteristics in terms of baudrate, format, ... as the service transponder. The transceiver element acts as a "logical starting/stopping point" for the spectral information propagation. At that point it is not meant to represent the capacity of add drop ports
-As a result transponder type is not part of the network info. it is related to the list of services requests.
-
-In a next step we plan to provide required features to enable dimensionning : alocation of ressources, counting channels, limitation of the number of channels, ...
-
-(in progress)
-
-

docs/extending.rst

@@ -0,0 +1,161 @@
+.. _extending:
+
+Extending GNPy with vendor-specific data
+========================================
+
+GNPy ships with an :ref:`equipment library<concepts-equipment>` containing machine-readable datasheets of networking equipment.
+Vendors who are willing to contribute descriptions of their supported products are encouraged to `submit a patch <https://review.gerrithub.io/Documentation/intro-gerrit-walkthrough-github.html>`__.
+
+This chapter discusses option for modeling performance of :ref:`EDFA amplifiers<extending-edfa>`, :ref:`Raman amplifiers<extending-raman>`, :ref:`transponders<extending-transponder>` and :ref:`ROADMs<extending-roadm>`.
+
+.. _extending-edfa:
+
+EDFAs
+-----
+
+An accurate description of the :abbr:`EDFA (Erbium-Doped Fiber Amplifier)` and especially its noise characteristics is required.
+GNPy describes this property in terms of the **Noise Figure (NF)** of an amplifier model as a function of its operating point.
+GNPy supports several different :ref:`noise models<concepts-nf-model>`, and vendors are encouraged to pick one which describes performance of their equipment most accurately.
+
+.. _ext-nf-model-polynomial-NF:
+
+Polynomial NF
+*************
+
+This model computes the NF as a function of the difference between the optimal gain and the current gain.
+The NF is expressed as a third-degree polynomial:
+
+.. math::
+
+       f(x) &= \text{a}x^3 + \text{b}x^2 + \text{c}x + \text{d}
+
+  \text{NF} &= f(G_\text{max} - G)
+
+This model can be also used for fixed-gain fixed-NF amplifiers.
+In that case, use:
+
+.. math::
+
+  a = b = c &= 0
+
+          d &= \text{NF}
+
+.. _ext-nf-model-polynomial-OSNR-OpenROADM:
+
+Polynomial OSNR (OpenROADM-style)
+*********************************
+
+This model is useful for amplifiers compliant to the OpenROADM specification for ILA.
+In OpenROADM, amplifier performance is evaluated via its incremental OSNR, which is a function of the input power.
+
+.. math::
+
+    \text{OSNR}_\text{inc}(P_\text{in}) = \text{a}P_\text{in}^3 + \text{b}P_\text{in}^2 + \text{c}P_\text{in} + \text{d}
+
+.. _ext-nf-model-min-max-NF:
+
+Min-max NF
+**********
+
+When the vendor prefers not to share the amplifier description in full detail, GNPy also supports describing the NF characteristics via the *minimal* and *maximal NF*.
+This approximates a more accurate polynomial description reasonably well for some models of a dual-coil EDFA with a VOA in between.
+In these amplifiers, the minimal NF is achieved when the EDFA operates at its maximal (and usually optimal, in terms of flatness) gain.
+The worst (maximal) NF applies  when the EDFA operates at the minimal gain.
+
+.. _ext-nf-model-dual-stage-amplifier:
+
+Dual-stage
+**********
+
+Dual-stage amplifier combines two distinct amplifiers.
+Vendors which provide an accurate description of their preamp and booster stages separately can use the dual-stage model for an aggregate description of the whole amplifier.
+
+.. _ext-nf-model-advanced:
+
+Advanced Specification
+**********************
+
+The amplifier performance can be further described in terms of gain ripple, NF ripple, and the dynamic gain tilt.
+When provided, the amplifier characteristic is fine-tuned as a function of carrier frequency.
+
+.. _extending-raman:
+
+Raman Amplifiers
+----------------
+
+An accurate simulation of Raman amplification requires knowledge of:
+
+- the *power* and *wavelength* of all Raman pumping lasers,
+- the *direction*, whether it is co-propagating or counter-propagating,
+- the Raman efficiency of the fiber,
+- the fiber temperature.
+
+Under certain scenarios it is useful to be able to run a simulation without an accurate Raman description.
+For these purposes, it is possible to approximate a Raman amplifier via a fixed-gain EDFA with the :ref:`polynomial NF<ext-nf-model-polynomial-NF>` model using :math:`\text{a} = \text{b} = \text{c} = 0`, and a desired effective :math:`\text{d} = NF`.
+This is also useful to quickly approximate a hybrid EDFA+Raman amplifier.
+
+.. _extending-transponder:
+
+Transponders
+------------
+
+Since transponders are usually capable of operating in a variety of modes, these are described separately.
+A *mode* usually refers to a particular performance point that is defined by a combination of the symbol rate, modulation format, and :abbr:`FEC (Forward Error Correction)`.
+
+The following data are required for each mode:
+
+``bit-rate``
+  Data bit rate, in :math:`\text{Gbits}\times s^{-1}`.
+``baud-rate``
+  Symbol modulation rate, in :math:`\text{Gbaud}`.
+``required-osnr``
+  Minimal allowed OSNR for the receiver.
+``tx-osnr``
+  Initial OSNR at the transmitter's output.
+``grid-spacing``
+  Minimal grid spacing, i.e., an effective channel spectral bandwidth.
+  In :math:`\text{Hz}`.
+``tx-roll-off``
+  Roll-off parameter (:math:`\beta`) of the TX pulse shaping filter.
+  This assumes a raised-cosine filter.
+``rx-power-min`` and ``rx-power-max``
+  The allowed range of power at the receiver.
+  In :math:`\text{dBm}`.
+``cd-max``
+  Maximal allowed Chromatic Dispersion (CD).
+  In :math:`\text{ps}/\text{nm}`.
+``pmd-max``
+  Maximal allowed Polarization Mode Dispersion (PMD).
+  In :math:`\text{ps}`.
+``cd-penalty``
+  *Work-in-progress.*
+  Describes the increase of the requires GSNR as the :abbr:`CD (Chromatic Dispersion)` deteriorates.
+``dgd-penalty``
+  *Work-in-progress.*
+  Describes the increase of the requires GSNR as the :abbr:`DGD (Differential Group Delay)` deteriorates.
+``pmd-penalty``
+  *Work-in-progress.*
+  Describes the increase of the requires GSNR as the :abbr:`PMD (Polarization Mode Dispersion)` deteriorates.
+
+GNPy does not directly track the FEC performance, so the type of chosen FEC is likely indicated in the *name* of the selected transponder mode alone.
+
+.. _extending-roadm:
+
+ROADMs
+------
+
+In a :abbr:`ROADM (Reconfigurable Add/Drop Multiplexer)`, GNPy simulates the impairments of the preamplifiers and boosters of line degrees :ref:`separately<topo-roadm-preamp-booster>`.
+The set of parameters for each ROADM model therefore includes:
+
+``add-drop-osnr``
+  OSNR penalty introduced by the Add and Drop stages of this ROADM type.
+``target-channel-out-power``
+  Per-channel target TX power towards the egress amplifier.
+  Within GNPy, a ROADM is expected to attenuate any signal that enters the ROADM node to this level.
+  This can be overridden on a per-link in the network topology.
+``pmd``
+  Polarization mode dispersion (PMD) penalty of the express path.
+  In :math:`\text{ps}`.
+
+Provisions are in place to define the list of all allowed booster and preamplifier types.
+This is useful for specifying constraints on what amplifier modules fit into ROADM chassis, and when using fully disaggregated ROADM topologies as well.

docs/gnpy-api-core.rst

@@ -0,0 +1,13 @@
+``gnpy.core``
+-------------
+
+.. automodule:: gnpy.core
+.. automodule:: gnpy.core.ansi_escapes
+.. automodule:: gnpy.core.elements
+.. automodule:: gnpy.core.equipment
+.. automodule:: gnpy.core.exceptions
+.. automodule:: gnpy.core.info
+.. automodule:: gnpy.core.network
+.. automodule:: gnpy.core.parameters
+.. automodule:: gnpy.core.science_utils
+.. automodule:: gnpy.core.utils

docs/gnpy-api-tools.rst

@@ -0,0 +1,9 @@
+``gnpy.tools``
+--------------
+
+.. automodule:: gnpy.tools
+.. automodule:: gnpy.tools.cli_examples
+.. automodule:: gnpy.tools.convert
+.. automodule:: gnpy.tools.json_io
+.. automodule:: gnpy.tools.plots
+.. automodule:: gnpy.tools.service_sheet

docs/gnpy-api-topology.rst

@@ -0,0 +1,6 @@
+``gnpy.topology``
+-----------------
+
+.. automodule:: gnpy.topology
+.. automodule:: gnpy.topology.request
+.. automodule:: gnpy.topology.spectrum_assignment

docs/gnpy-api.rst

@@ -0,0 +1,14 @@
+***************************
+API Reference Documentation
+***************************
+
+``gnpy`` package
+================
+
+.. automodule:: gnpy
+
+.. toctree::
+
+   gnpy-api-core
+   gnpy-api-topology
+   gnpy-api-tools

docs/index.rst

@@ -1,33 +1,20 @@
-.. gnpy documentation master file, created by
+GNPy: Optical Route Planning Library
-   sphinx-quickstart on Mon Dec 18 14:41:01 2017.
+=====================================================================
-   You can adapt this file completely to your liking, but it should at least
-   contain the root `toctree` directive.
 
-Welcome to gnpy's documentation!
+`GNPy <http://github.com/telecominfraproject/gnpy>`_ is an open-source,
-================================
+community-developed library for building route planning and optimization tools
-
+in real-world mesh optical networks. It is based on the Gaussian Noise Model.
-**gnpy is an open-source, community-developed library for building route planning
-and optimization tools in real-world mesh optical networks.**
-
-`gnpy <http://github.com/telecominfraproject/gnpy>`_ is:
-
-- a sponsored project of the `OOPT/PSE <http://telecominfraproject.com/project-groups-2/backhaul-projects/open-optical-packet-transport/>`_ working group of the `Telecom Infra Project <http://telecominfraproject.com>`_.
-- fully community-driven, fully open source library
-- driven by a consortium of operators, vendors, and academic researchers
-- intended for rapid development of production-grade route planning tools
-- easily extensible to include custom network elements
-- performant to the scale of real-world mesh optical networks
-
-Documentation
-=============
-
-The following pages are meant to describe specific implementation details and
-modeling assumptions behind gnpy. 
 
 .. toctree::
-   :maxdepth: 2
+   :maxdepth: 4
 
+   concepts
+   install
+   json
+   excel
+   extending
    model
+   gnpy-api
 
 Indices and tables
 ==================
@@ -36,67 +23,3 @@ Indices and tables
 * :ref:`modindex`
 * :ref:`search`
 
-Contributors in alphabetical order
-==================================
-+----------+------------+-----------------------+--------------------------------------+
-| Name     | Surname    | Affiliation           | Contact                              |
-+==========+============+=======================+======================================+
-| Alessio  | Ferrari    | Politecnico di Torino | alessio.ferrari@polito.it            |
-+----------+------------+-----------------------+--------------------------------------+
-| Anders   | Lindgren   | Telia Company         | Anders.X.Lindgren@teliacompany.com   |
-+----------+------------+-----------------------+--------------------------------------+
-| Andrea   | d'Amico    | Politecnico di Torino | andrea.damico@polito.it              |
-+----------+------------+-----------------------+--------------------------------------+
-| Brian    | Taylor     | Facebook              | briantaylor@fb.com                   |
-+----------+------------+-----------------------+--------------------------------------+
-| David    | Boertjes   | Ciena                 | dboertje@ciena.com                   |
-+----------+------------+-----------------------+--------------------------------------+
-| Diego    | Landa      | Facebook              | dlanda@fb.com                        |
-+----------+------------+-----------------------+--------------------------------------+
-| Esther   | Le Rouzic  | Orange                | esther.lerouzic@orange.com           |
-+----------+------------+-----------------------+--------------------------------------+
-| Gabriele | Galimberti | Cisco                 | ggalimbe@cisco.com                   |
-+----------+------------+-----------------------+--------------------------------------+
-| Gert     | Grammel    | Juniper Networks      | ggrammel@juniper.net                 |
-+----------+------------+-----------------------+--------------------------------------+
-| Gilad    | Goldfarb   | Facebook              | giladg@fb.com                        |
-+----------+------------+-----------------------+--------------------------------------+
-| James    | Powell     | Telecom Infra Project | james.powell@telecominfraproject.com |
-+----------+------------+-----------------------+--------------------------------------+
-| Jan      | Kundrát    | Telecom Infra Project | jan.kundrat@telecominfraproject.com  |
-+----------+------------+-----------------------+--------------------------------------+
-| Jeanluc  | Augé       | Orange                | jeanluc.auge@orange.com              |
-+----------+------------+-----------------------+--------------------------------------+
-| Jonas    | Mårtensson | RISE Research Sweden  | jonas.martensson@ri.se               |
-+----------+------------+-----------------------+--------------------------------------+
-| Mattia   | Cantono    | Politecnico di Torino | mattia.cantono@polito.it             |
-+----------+------------+-----------------------+--------------------------------------+
-| Miguel   | Garrich    | University Catalunya  | miquel.garrich@upct.es               |
-+----------+------------+-----------------------+--------------------------------------+
-| Raj      | Nagarajan  | Lumentum              | raj.nagarajan@lumentum.com           |
-+----------+------------+-----------------------+--------------------------------------+
-| Roberts  | Miculens   | Lattelecom            | roberts.miculens@lattelecom.lv       |
-+----------+------------+-----------------------+--------------------------------------+
-| Shengxiang | Zhu      | University of Arizona | szhu@email.arizona.edu               |
-+----------+------------+-----------------------+--------------------------------------+
-| Stefan   | Melin      | Telia Company         | Stefan.Melin@teliacompany.com        |
-+----------+------------+-----------------------+--------------------------------------+
-| Vittorio | Curri      | Politecnico di Torino | vittorio.curri@polito.it             |
-+----------+------------+-----------------------+--------------------------------------+
-| Xufeng   | Liu        | Jabil                 | xufeng_liu@jabil.com                 |
-+----------+------------+-----------------------+--------------------------------------+
-
---------------
-
-- Goal is to build an end-to-end simulation environment which defines the
-  network models of the optical device transfer functions and their parameters.
-  This environment will provide validation of the optical performance
-  requirements for the TIP OLS building blocks.   
-- The model may be approximate or complete depending on the network complexity.
-  Each model shall be validated against the proposed network scenario. 
-- The environment must be able to process network models from multiple vendors,
-  and also allow users to pick any implementation in an open source framework. 
-- The PSE will influence and benefit from the innovation of the DTC, API, and
-  OLS working groups.
-- The PSE represents a step along the journey towards multi-layer optimization.
-

docs/install.rst

@@ -0,0 +1,111 @@
+Installing GNPy
+---------------
+
+There are several methods on how to obtain GNPy.
+The easiest option for a non-developer is probably going via our :ref:`Docker images<install-docker>`.
+Developers are encouraged to install the :ref:`Python package in the same way as any other Python package<install-pip>`.
+Note that this needs a :ref:`working installation of Python<install-python>`, for example :ref:`via Anaconda<install-anaconda>`.
+
+.. _install-docker:
+
+Using prebuilt Docker images
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+Our `Docker images <https://hub.docker.com/r/telecominfraproject/oopt-gnpy>`_ contain everything needed to run all examples from this guide.
+Docker transparently fetches the image over the network upon first use.
+On Linux and Mac, run:
+
+
+.. code-block:: shell-session
+
+    $ docker run -it --rm --volume $(pwd):/shared telecominfraproject/oopt-gnpy
+    root@bea050f186f7:/shared/example-data#
+
+On Windows, launch from Powershell as:
+
+.. code-block:: console
+
+    PS C:\> docker run -it --rm --volume ${PWD}:/shared telecominfraproject/oopt-gnpy
+    root@89784e577d44:/shared/example-data#
+
+In both cases, a directory named ``example-data/`` will appear in your current working directory.
+GNPy automaticallly populates it with example files from the current release.
+Remove that directory if you want to start from scratch.
+
+.. _install-python:
+
+Using Python on your computer
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+   **Note**: `gnpy` supports Python 3 only. Python 2 is not supported.
+   `gnpy` requires Python ≥3.6
+
+   **Note**: the `gnpy` maintainers strongly recommend the use of Anaconda for
+   managing dependencies.
+
+It is recommended that you use a "virtual environment" when installing `gnpy`.
+Do not install `gnpy` on your system Python.
+
+.. _install-anaconda:
+
+We recommend the use of the `Anaconda Python distribution <https://www.anaconda.com/download>`_ which comes with many scientific computing
+dependencies pre-installed. Anaconda creates a base "virtual environment" for
+you automatically. You can also create and manage your ``conda`` "virtual
+environments" yourself (see:
+https://conda.io/docs/user-guide/tasks/manage-environments.html)
+
+To activate your Anaconda virtual environment, you may need to do the
+following:
+
+.. code-block:: shell-session
+
+    $ source /path/to/anaconda/bin/activate # activate Anaconda base environment
+    (base) $                                # note the change to the prompt
+
+You can check which Anaconda environment you are using with:
+
+.. code-block:: shell-session
+
+    (base) $ conda env list                          # list all environments
+    # conda environments:
+    #
+    base                  *  /src/install/anaconda3
+
+    (base) $ echo $CONDA_DEFAULT_ENV                 # show default environment
+    base
+
+You can check your version of Python with the following. If you are using
+Anaconda's Python 3, you should see similar output as below. Your results may
+be slightly different depending on your Anaconda installation path and the
+exact version of Python you are using.
+
+.. code-block:: shell-session
+
+    $ which python                   # check which Python executable is used
+    /path/to/anaconda/bin/python
+    $ python -V                      # check your Python version
+    Python 3.6.5 :: Anaconda, Inc.
+
+.. _install-pip:
+
+Installing the Python package
+*****************************
+
+From within your Anaconda Python 3 environment, you can clone the master branch
+of the `gnpy` repo and install it with:
+
+.. code-block:: shell-session
+
+    $ git clone https://github.com/Telecominfraproject/oopt-gnpy # clone the repo
+    $ cd oopt-gnpy
+    $ pip install --editable . # note the trailing dot
+
+To test that `gnpy` was successfully installed, you can run this command. If it
+executes without a ``ModuleNotFoundError``, you have successfully installed
+`gnpy`.
+
+.. code-block:: shell-session
+
+    $ python -c 'import gnpy' # attempt to import gnpy
+
+    $ pytest                  # run tests

docs/json.rst

@@ -0,0 +1,341 @@
+JSON Input Files
+================
+
+GNPy uses a set of JSON files for modeling the network.
+Some data (such as network topology or the service requests) can be also passed via :ref:`XLS files<excel-service-sheet>`.
+
+Equipment Library
+-----------------
+
+Design and transmission parameters are defined in a dedicated json file.
+By default, this information is read from `gnpy/example-data/eqpt_config.json <https://github.com/Telecominfraproject/oopt-gnpy/blob/master/gnpy/example-data/eqpt_config.json>`_.
+This file defines the equipment libraries that can be customized (EDFAs, fibers, and transceivers).
+
+It also defines the simulation parameters (spans, ROADMs, and the spectral
+information to transmit.)
+
+EDFA
+~~~~
+
+The EDFA equipment library is a list of supported amplifiers. New amplifiers
+can be added and existing ones removed. Three different noise models are available:
+
+1. ``'type_def': 'variable_gain'`` is a simplified model simulating a 2-coil EDFA with internal, input and output VOAs. The NF vs gain response is calculated accordingly based on the input parameters: ``nf_min``, ``nf_max``, and ``gain_flatmax``. It is not a simple interpolation but a 2-stage NF calculation.
+2. ``'type_def': 'fixed_gain'`` is a fixed gain model.  `NF == Cte == nf0` if `gain_min < gain < gain_flatmax`
+3. ``'type_def': None`` is an advanced model. A detailed JSON configuration file is required (by default `gnpy/example-data/std_medium_gain_advanced_config.json <https://github.com/Telecominfraproject/oopt-gnpy/blob/master/gnpy/example-data/std_medium_gain_advanced_config.json>`_). It uses a 3rd order polynomial where NF = f(gain), NF_ripple = f(frequency), gain_ripple = f(frequency), N-array dgt = f(frequency). Compared to the previous models, NF ripple and gain ripple are modelled.
+
+For all amplifier models:
+
++------------------------+-----------+-----------------------------------------+
+| field                  |   type    | description                             |
++========================+===========+=========================================+
+| ``type_variety``       | (string)  | a unique name to ID the amplifier in the|
+|                        |           | JSON/Excel template topology input file |
++------------------------+-----------+-----------------------------------------+
+| ``out_voa_auto``       | (boolean) | auto_design feature to optimize the     |
+|                        |           | amplifier output VOA. If true, output   |
+|                        |           | VOA is present and will be used to push |
+|                        |           | amplifier gain to its maximum, within   |
+|                        |           | EOL power margins.                      |
++------------------------+-----------+-----------------------------------------+
+| ``allowed_for_design`` | (boolean) | If false, the amplifier will not be     |
+|                        |           | picked by auto-design but it can still  |
+|                        |           | be used as a manual input (from JSON or |
+|                        |           | Excel template topology files.)         |
++------------------------+-----------+-----------------------------------------+
+
+Fiber
+~~~~~
+
+The fiber library currently describes SSMF and NZDF but additional fiber types can be entered by the user following the same model:
+
++----------------------+-----------+-----------------------------------------+
+| field                | type      | description                             |
++======================+===========+=========================================+
+| ``type_variety``     | (string)  | a unique name to ID the fiber in the    |
+|                      |           | JSON or Excel template topology input   |
+|                      |           | file                                    |
++----------------------+-----------+-----------------------------------------+
+| ``dispersion``       | (number)  | (s.m-1.m-1)                             |
++----------------------+-----------+-----------------------------------------+
+| ``dispersion_slope`` | (number)  | (s.m-1.m-1.m-1)                         |
++----------------------+-----------+-----------------------------------------+
+| ``gamma``            | (number)  | 2pi.n2/(lambda*Aeff) (w-1.m-1)          |
++----------------------+-----------+-----------------------------------------+
+| ``pmd_coef``         | (number)  | Polarization mode dispersion (PMD)      |
+|                      |           | coefficient. (s.sqrt(m)-1)              |
++----------------------+-----------+-----------------------------------------+
+
+Transceiver
+~~~~~~~~~~~
+
+The transceiver equipment library is a list of supported transceivers. New
+transceivers can be added and existing ones removed at will by the user. It is
+used to determine the service list path feasibility when running the
+``gnpy-path-request`` script.
+
++----------------------+-----------+-----------------------------------------+
+| field                | type      | description                             |
++======================+===========+=========================================+
+| ``type_variety``     | (string)  | A unique name to ID the transceiver in  |
+|                      |           | the JSON or Excel template topology     |
+|                      |           | input file                              |
++----------------------+-----------+-----------------------------------------+
+| ``frequency``        | (number)  | Min/max as below.                       |
++----------------------+-----------+-----------------------------------------+
+| ``mode``             | (number)  | A list of modes supported by the        |
+|                      |           | transponder. New modes can be added at  |
+|                      |           | will by the user. The modes are specific|
+|                      |           | to each transponder type_variety.       |
+|                      |           | Each mode is described as below.        |
++----------------------+-----------+-----------------------------------------+
+
+The modes are defined as follows:
+
++----------------------+-----------+-----------------------------------------+
+| field                | type      | description                             |
++======================+===========+=========================================+
+| ``format``           | (string)  | a unique name to ID the mode            |
++----------------------+-----------+-----------------------------------------+
+| ``baud_rate``        | (number)  | in Hz                                   |
++----------------------+-----------+-----------------------------------------+
+| ``OSNR``             | (number)  | min required OSNR in 0.1nm (dB)         |
++----------------------+-----------+-----------------------------------------+
+| ``bit_rate``         | (number)  | in bit/s                                |
++----------------------+-----------+-----------------------------------------+
+| ``roll_off``         | (number)  | Pure number between 0 and 1. TX signal  |
+|                      |           | roll-off shape. Used by Raman-aware     |
+|                      |           | simulation code.                        |
++----------------------+-----------+-----------------------------------------+
+| ``tx_osnr``          | (number)  | In dB. OSNR out from transponder.       |
++----------------------+-----------+-----------------------------------------+
+| ``cost``             | (number)  | Arbitrary unit                          |
++----------------------+-----------+-----------------------------------------+
+
+ROADM
+~~~~~
+
+The user can only modify the value of existing parameters:
+
++--------------------------+-----------+---------------------------------------------+
+| field                    |   type    | description                                 |
++==========================+===========+=============================================+
+| ``target_pch_out_db``    | (number)  | Auto-design sets the ROADM egress channel   |
+|                          |           | power. This reflects typical control loop   |
+|                          |           | algorithms that adjust ROADM losses to      |
+|                          |           | equalize channels (eg coming from different |
+|                          |           | ingress direction or add ports)             |
+|                          |           | This is the default value                   |
+|                          |           | Roadm/params/target_pch_out_db if no value  |
+|                          |           | is given in the ``Roadm`` element in the    |
+|                          |           | topology input description.                 |
+|                          |           | This default value is ignored if a          |
+|                          |           | params/target_pch_out_db value is input in  |
+|                          |           | the topology for a given ROADM.             |
++--------------------------+-----------+---------------------------------------------+
+| ``add_drop_osnr``        | (number)  | OSNR contribution from the add/drop ports   |
++--------------------------+-----------+---------------------------------------------+
+| ``pmd``                  | (number)  | Polarization mode dispersion (PMD). (s)     |
++--------------------------+-----------+---------------------------------------------+
+| ``restrictions``         | (dict of  | If non-empty, keys ``preamp_variety_list``  |
+|                          |  strings) | and ``booster_variety_list`` represent      |
+|                          |           | list of ``type_variety`` amplifiers which   |
+|                          |           | are allowed for auto-design within ROADM's  |
+|                          |           | line degrees.                               |
+|                          |           |                                             |
+|                          |           | If no booster should be placed on a degree, |
+|                          |           | insert a ``Fused`` node on the degree       |
+|                          |           | output.                                     |
++--------------------------+-----------+---------------------------------------------+
+
+Global parameters
+-----------------
+
+The following options are still defined in ``eqpt_config.json`` for legacy reasons, but
+they do not correspond to tangible network devices.
+
+Auto-design automatically creates EDFA amplifier network elements when they are
+missing, after a fiber, or between a ROADM and a fiber. This auto-design
+functionality can be manually and locally deactivated by introducing a ``Fused``
+network element after a ``Fiber`` or a ``Roadm`` that doesn't need amplification.
+The amplifier is chosen in the EDFA list of the equipment library based on
+gain, power, and NF criteria. Only the EDFA that are marked
+``'allowed_for_design': true`` are considered.
+
+For amplifiers defined in the topology JSON input but whose ``gain = 0``
+(placeholder), auto-design will set its gain automatically: see ``power_mode`` in
+the ``Spans`` library to find out how the gain is calculated.
+
+Span
+~~~~
+
+Span configuration is not a list (which may change
+in later releases) and the user can only modify the value of existing
+parameters:
+
++-------------------------------------+-----------+---------------------------------------------+
+| field                               | type      | description                                 |
++=====================================+===========+=============================================+
+| ``power_mode``                      | (boolean) | If false, gain mode. Auto-design sets       |
+|                                     |           | amplifier gain = preceding span loss,       |
+|                                     |           | unless the amplifier exists and its         |
+|                                     |           | gain > 0 in the topology input JSON.        |
+|                                     |           | If true, power mode (recommended for        |
+|                                     |           | auto-design and power sweep.)               |
+|                                     |           | Auto-design sets amplifier power            |
+|                                     |           | according to delta_power_range. If the      |
+|                                     |           | amplifier exists with gain > 0 in the       |
+|                                     |           | topology JSON input, then its gain is       |
+|                                     |           | translated into a power target/channel.     |
+|                                     |           | Moreover, when performing a power sweep     |
+|                                     |           | (see ``power_range_db`` in the SI           |
+|                                     |           | configuration library) the power sweep      |
+|                                     |           | is performed w/r/t this power target,       |
+|                                     |           | regardless of preceding amplifiers          |
+|                                     |           | power saturation/limitations.               |
++-------------------------------------+-----------+---------------------------------------------+
+| ``delta_power_range_db``            | (number)  | Auto-design only, power-mode                |
+|                                     |           | only. Specifies the [min, max, step]        |
+|                                     |           | power excursion/span. It is a relative      |
+|                                     |           | power excursion w/r/t the                   |
+|                                     |           | power_dbm + power_range_db                  |
+|                                     |           | (power sweep if applicable) defined in      |
+|                                     |           | the SI configuration library. This          |
+|                                     |           | relative power excursion is = 1/3 of        |
+|                                     |           | the span loss difference with the           |
+|                                     |           | reference 20 dB span. The 1/3 slope is      |
+|                                     |           | derived from the GN model equations.        |
+|                                     |           | For example, a 23 dB span loss will be      |
+|                                     |           | set to 1 dB more power than a 20 dB         |
+|                                     |           | span loss. The 20 dB reference spans        |
+|                                     |           | will *always* be set to                     |
+|                                     |           | power = power_dbm + power_range_db.         |
+|                                     |           | To configure the same power in all          |
+|                                     |           | spans, use `[0, 0, 0]`. All spans will      |
+|                                     |           | be set to                                   |
+|                                     |           | power = power_dbm + power_range_db.         |
+|                                     |           | To configure the same power in all spans    |
+|                                     |           | and 3 dB more power just for the longest    |
+|                                     |           | spans: `[0, 3, 3]`. The longest spans are   |
+|                                     |           | set to                                      |
+|                                     |           | power = power_dbm + power_range_db + 3.     |
+|                                     |           | To configure a 4 dB power range across      |
+|                                     |           | all spans in 0.5 dB steps: `[-2, 2, 0.5]`.  |
+|                                     |           | A 17 dB span is set to                      |
+|                                     |           | power = power_dbm + power_range_db - 1,     |
+|                                     |           | a 20 dB span to                             |
+|                                     |           | power = power_dbm + power_range_db and      |
+|                                     |           | a 23 dB span to                             |
+|                                     |           | power = power_dbm + power_range_db + 1      |
++-------------------------------------+-----------+---------------------------------------------+
+| ``max_fiber_lineic_loss_for_raman`` | (number)  | Maximum linear fiber loss for Raman         |
+|                                     |           | amplification use.                          |
++-------------------------------------+-----------+---------------------------------------------+
+| ``max_length``                      | (number)  | Split fiber lengths > max_length.           |
+|                                     |           | Interest to support high level              |
+|                                     |           | topologies that do not specify in line      |
+|                                     |           | amplification sites. For example the        |
+|                                     |           | CORONET_Global_Topology.xlsx defines        |
+|                                     |           | links > 1000km between 2 sites: it          |
+|                                     |           | couldn't be simulated if these links        |
+|                                     |           | were not split in shorter span lengths.     |
++-------------------------------------+-----------+---------------------------------------------+
+| ``length_unit``                     | "m"/"km"  | Unit for ``max_length``.                    |
++-------------------------------------+-----------+---------------------------------------------+
+| ``max_loss``                        | (number)  | Not used in the current code                |
+|                                     |           | implementation.                             |
++-------------------------------------+-----------+---------------------------------------------+
+| ``padding``                         | (number)  | In dB. Min span loss before putting an      |
+|                                     |           | attenuator before fiber. Attenuator         |
+|                                     |           | value                                       |
+|                                     |           | Fiber.att_in = max(0, padding - span_loss). |
+|                                     |           | Padding can be set manually to reach a      |
+|                                     |           | higher padding value for a given fiber      |
+|                                     |           | by filling in the Fiber/params/att_in       |
+|                                     |           | field in the topology json input [1]        |
+|                                     |           | but if span_loss = length * loss_coef       |
+|                                     |           | + att_in + con_in + con_out < padding,      |
+|                                     |           | the specified att_in value will be          |
+|                                     |           | completed to have span_loss = padding.      |
+|                                     |           | Therefore it is not possible to set         |
+|                                     |           | span_loss < padding.                        |
++-------------------------------------+-----------+---------------------------------------------+
+| ``EOL``                             | (number)  | All fiber span loss ageing. The value       |
+|                                     |           | is added to the con_out (fiber output       |
+|                                     |           | connector). So the design and the path      |
+|                                     |           | feasibility are performed with              |
+|                                     |           | span_loss + EOL. EOL cannot be set          |
+|                                     |           | manually for a given fiber span             |
+|                                     |           | (workaround is to specify higher            |
+|                                     |           | ``con_out`` loss for this fiber).           |
++-------------------------------------+-----------+---------------------------------------------+
+| ``con_in``,                         | (number)  | Default values if Fiber/params/con_in/out   |
+| ``con_out``                         |           | is None in the topology input               |
+|                                     |           | description. This default value is          |
+|                                     |           | ignored if a Fiber/params/con_in/out        |
+|                                     |           | value is input in the topology for a        |
+|                                     |           | given Fiber.                                |
++-------------------------------------+-----------+---------------------------------------------+
+
+.. code-block:: json
+
+    {
+        "uid": "fiber (A1->A2)",
+        "type": "Fiber",
+        "type_variety": "SSMF",
+        "params":
+        {
+              "length": 120.0,
+              "loss_coef": 0.2,
+              "length_units": "km",
+              "att_in": 0,
+              "con_in": 0,
+              "con_out": 0
+        }
+    }
+
+SpectralInformation
+~~~~~~~~~~~~~~~~~~~
+
+The user can only modify the value of existing parameters. It defines a spectrum of N
+identical carriers. While the code libraries allow for different carriers and
+power levels, the current user parametrization only allows one carrier type and
+one power/channel definition.
+
++----------------------+-----------+-------------------------------------------+
+| field                |   type    | description                               |
++======================+===========+===========================================+
+| ``f_min``,           | (number)  | In Hz. Carrier min max excursion.         |
+| ``f_max``            |           |                                           |
++----------------------+-----------+-------------------------------------------+
+| ``baud_rate``        | (number)  | In Hz. Simulated baud rate.               |
++----------------------+-----------+-------------------------------------------+
+| ``spacing``          | (number)  | In Hz. Carrier spacing.                   |
++----------------------+-----------+-------------------------------------------+
+| ``roll_off``         | (number)  | Pure number between 0 and 1. TX signal    |
+|                      |           | roll-off shape. Used by Raman-aware       |
+|                      |           | simulation code.                          |
++----------------------+-----------+-------------------------------------------+
+| ``tx_osnr``          | (number)  | In dB. OSNR out from transponder.         |
++----------------------+-----------+-------------------------------------------+
+| ``power_dbm``        | (number)  | Reference channel power. In gain mode     |
+|                      |           | (see spans/power_mode = false), all gain  |
+|                      |           | settings are offset w/r/t this reference  |
+|                      |           | power. In power mode, it is the           |
+|                      |           | reference power for                       |
+|                      |           | Spans/delta_power_range_db. For example,  |
+|                      |           | if delta_power_range_db = `[0,0,0]`, the  |
+|                      |           | same power=power_dbm is launched in every |
+|                      |           | spans. The network design is performed    |
+|                      |           | with the power_dbm value: even if a       |
+|                      |           | power sweep is defined (see after) the    |
+|                      |           | design is not repeated.                   |
++----------------------+-----------+-------------------------------------------+
+| ``power_range_db``   | (number)  | Power sweep excursion around power_dbm.   |
+|                      |           | It is not the min and max channel power   |
+|                      |           | values! The reference power becomes:      |
+|                      |           | power_range_db + power_dbm.               |
++----------------------+-----------+-------------------------------------------+
+| ``sys_margins``      | (number)  | In dB. Added margin on min required       |
+|                      |           | transceiver OSNR.                         |
++----------------------+-----------+-------------------------------------------+

docs/model.rst

@@ -1,5 +1,7 @@
-The QoT estimation in the PSE framework of TIP-OOPT
+.. _physical-model:
-=======================================================
+
+Physical Model used in GNPy
+===========================
 
 QoT-E including ASE noise and NLI accumulation 
 ----------------------------------------------

docs/source/gnpy.core.rst

@@ -1,94 +0,0 @@
-gnpy\.core package
-==================
-
-Submodules
-----------
-
-gnpy\.core\.ansi_escapes module
--------------------------------
-
-.. automodule:: gnpy.core.ansi_escapes
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.convert module
---------------------------
-
-.. automodule:: gnpy.core.convert
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.elements module
----------------------------
-
-.. automodule:: gnpy.core.elements
-
-gnpy\.core\.equipment module
-----------------------------
-
-.. automodule:: gnpy.core.equipment
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.exceptions module
------------------------------
-
-.. automodule:: gnpy.core.exceptions
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.execute module
---------------------------
-
-.. automodule:: gnpy.core.execute
-
-gnpy\.core\.info module
------------------------
-
-.. automodule:: gnpy.core.info
-
-gnpy\.core\.network module
---------------------------
-
-.. automodule:: gnpy.core.network
-
-gnpy\.core\.node module
------------------------
-
-.. automodule:: gnpy.core.node
-
-gnpy\.core\.request module
---------------------------
-
-.. automodule:: gnpy.core.request
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.service_sheet module
---------------------------------
-
-.. automodule:: gnpy.core.service_sheet
-    :members:
-    :undoc-members:
-    :show-inheritance:
-
-gnpy\.core\.units module
-------------------------
-
-.. automodule:: gnpy.core.units
-
-gnpy\.core\.utils module
-------------------------
-
-.. automodule:: gnpy.core.utils
-
-
-Module contents
----------------
-
-.. automodule:: gnpy.core

docs/source/gnpy.rst

@@ -1,14 +0,0 @@
-gnpy package
-============
-
-Subpackages
------------
-
-.. toctree::
-
-    gnpy.core
-
-Module contents
----------------
-
-.. automodule:: gnpy

docs/source/modules.rst

@@ -1,7 +0,0 @@
-gnpy
-====
-
-.. toctree::
-   :maxdepth: 4
-
-   gnpy

examples/path_requests_run.py

@@ -1,514 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-"""
-path_requests_run.py
-====================
-
-Reads a JSON request file in accordance with the Yang model
-for requesting path computation and returns path results in terms
-of path and feasibilty.
-
-See: draft-ietf-teas-yang-path-computation-01.txt
-"""
-
-from sys import exit
-from argparse import ArgumentParser
-from pathlib import Path
-from collections import namedtuple
-from logging import getLogger, basicConfig, CRITICAL, DEBUG, INFO
-from json import dumps, loads
-from numpy import mean
-from gnpy.core.service_sheet import convert_service_sheet, Request_element, Element
-from gnpy.core.utils import load_json
-from gnpy.core.network import load_network, build_network, save_network
-from gnpy.core.equipment import load_equipment, trx_mode_params, automatic_nch
-from gnpy.core.elements import Transceiver, Roadm
-from gnpy.core.utils import db2lin, lin2db
-from gnpy.core.request import (Path_request, Result_element,
-                               propagate, jsontocsv, Disjunction, compute_path_dsjctn,
-                               requests_aggregation, propagate_and_optimize_mode,
-                               BLOCKING_NOPATH, BLOCKING_NOMODE,
-                               find_reversed_path)
-from gnpy.core.exceptions import (ConfigurationError, EquipmentConfigError, NetworkTopologyError,
-                                  ServiceError, DisjunctionError)
-import gnpy.core.ansi_escapes as ansi_escapes
-from gnpy.core.spectrum_assignment import (build_oms_list, pth_assign_spectrum)
-from copy import copy, deepcopy
-from textwrap import dedent
-from math import ceil
-
-#EQPT_LIBRARY_FILENAME = Path(__file__).parent / 'eqpt_config.json'
-
-LOGGER = getLogger(__name__)
-
-PARSER = ArgumentParser(description='A function that computes performances for a list of ' +
-                        'services provided in a json file or an excel sheet.')
-PARSER.add_argument('network_filename', nargs='?', type=Path,\
-                    default=Path(__file__).parent / 'meshTopologyExampleV2.xls',\
-                    help='input topology file in xls or json')
-PARSER.add_argument('service_filename', nargs='?', type=Path,\
-                    default=Path(__file__).parent / 'meshTopologyExampleV2.xls',\
-                    help='input service file in xls or json')
-PARSER.add_argument('eqpt_filename', nargs='?', type=Path,\
-                    default=Path(__file__).parent / 'eqpt_config.json',\
-                    help='input equipment library in json. Default is eqpt_config.json')
-PARSER.add_argument('-bi', '--bidir', action='store_true',\
-                    help='considers that all demands are bidir')
-PARSER.add_argument('-v', '--verbose', action='count', default=0,\
-                    help='increases verbosity for each occurence')
-PARSER.add_argument('-o', '--output', type=Path)
-
-
-def requests_from_json(json_data, equipment):
-    """ converts the json data into a list of requests elements
-    """
-    requests_list = []
-
-    for req in json_data['path-request']:
-        # init all params from request
-        params = {}
-        params['request_id'] = req['request-id']
-        params['source'] = req['source']
-        params['bidir'] = req['bidirectional']
-        params['destination'] = req['destination']
-        params['trx_type'] = req['path-constraints']['te-bandwidth']['trx_type']
-        params['trx_mode'] = req['path-constraints']['te-bandwidth']['trx_mode']
-        params['format'] = params['trx_mode']
-        params['spacing'] = req['path-constraints']['te-bandwidth']['spacing']
-        try:
-            nd_list = req['explicit-route-objects']['route-object-include-exclude']
-        except KeyError:
-            nd_list = []
-        params['nodes_list'] = [n['num-unnum-hop']['node-id'] for n in nd_list]
-        params['loose_list'] = [n['num-unnum-hop']['hop-type'] for n in nd_list]
-        # recover trx physical param (baudrate, ...) from type and mode
-        # in trx_mode_params optical power is read from equipment['SI']['default'] and
-        # nb_channel is computed based on min max frequency and spacing
-        trx_params = trx_mode_params(equipment, params['trx_type'], params['trx_mode'], True)
-        params.update(trx_params)
-        # print(trx_params['min_spacing'])
-        # optical power might be set differently in the request. if it is indicated then the
-        # params['power'] is updated
-        try:
-            if req['path-constraints']['te-bandwidth']['output-power']:
-                params['power'] = req['path-constraints']['te-bandwidth']['output-power']
-        except KeyError:
-            pass
-        # same process for nb-channel
-        f_min = params['f_min']
-        f_max_from_si = params['f_max']
-        try:
-            if req['path-constraints']['te-bandwidth']['max-nb-of-channel'] is not None:
-                nch = req['path-constraints']['te-bandwidth']['max-nb-of-channel']
-                params['nb_channel'] = nch
-                spacing = params['spacing']
-                params['f_max'] = f_min + nch*spacing
-            else:
-                params['nb_channel'] = automatic_nch(f_min, f_max_from_si, params['spacing'])
-        except KeyError:
-            params['nb_channel'] = automatic_nch(f_min, f_max_from_si, params['spacing'])
-        consistency_check(params, f_max_from_si)
-
-        try:
-            params['path_bandwidth'] = req['path-constraints']['te-bandwidth']['path_bandwidth']
-        except KeyError:
-            pass
-        requests_list.append(Path_request(**params))
-    return requests_list
-
-def consistency_check(params, f_max_from_si):
-    """ checks that the requested parameters are consistant (spacing vs nb channel,
-        vs transponder mode...)
-    """
-    f_min = params['f_min']
-    f_max = params['f_max']
-    max_recommanded_nb_channels = automatic_nch(f_min, f_max, params['spacing'])
-    if params['baud_rate'] is not None:
-        #implicitely means that a mode is defined with min_spacing
-        if params['min_spacing'] > params['spacing']:
-            msg = f'Request {params["request_id"]} has spacing below transponder ' +\
-                  f'{params["trx_type"]} {params["trx_mode"]} min spacing value ' +\
-                  f'{params["min_spacing"]*1e-9}GHz.\nComputation stopped'
-            print(msg)
-            LOGGER.critical(msg)
-            raise ServiceError(msg)
-        if f_max > f_max_from_si:
-            msg = dedent(f'''
-            Requested channel number {params["nb_channel"]}, baud rate {params["baud_rate"]} GHz and requested spacing {params["spacing"]*1e-9}GHz 
-            is not consistent with frequency range {f_min*1e-12} THz, {f_max*1e-12} THz, min recommanded spacing {params["min_spacing"]*1e-9}GHz.
-            max recommanded nb of channels is {max_recommanded_nb_channels}
-            Computation stopped.''')
-            LOGGER.critical(msg)
-            raise ServiceError(msg)
-
-
-def disjunctions_from_json(json_data):
-    """ reads the disjunction requests from the json dict and create the list
-        of requested disjunctions for this set of requests
-    """
-    disjunctions_list = []
-    try:
-        temp_test = json_data['synchronization']
-    except KeyError:
-        temp_test = []
-    if temp_test:
-        for snc in json_data['synchronization']:
-            params = {}
-            params['disjunction_id'] = snc['synchronization-id']
-            params['relaxable'] = snc['svec']['relaxable']
-            params['link_diverse'] = 'link' in snc['svec']['disjointness']
-            params['node_diverse'] = 'node' in snc['svec']['disjointness']
-            params['disjunctions_req'] = snc['svec']['request-id-number']
-            disjunctions_list.append(Disjunction(**params))
-
-    return disjunctions_list
-
-
-def load_requests(filename, eqpt_filename, bidir):
-    """ loads the requests from a json or an excel file into a data string
-    """
-    if filename.suffix.lower() == '.xls':
-        LOGGER.info('Automatically converting requests from XLS to JSON')
-        try:
-            json_data = convert_service_sheet(filename, eqpt_filename, bidir=bidir)
-        except ServiceError as this_e:
-            print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {this_e}')
-            exit(1)
-    else:
-        with open(filename, encoding='utf-8') as my_f:
-            json_data = loads(my_f.read())
-    return json_data
-
-def compute_path_with_disjunction(network, equipment, pathreqlist, pathlist):
-    """ use a list but a dictionnary might be helpful to find path based on request_id
-        TODO change all these req, dsjct, res lists into dict !
-    """
-    path_res_list = []
-    reversed_path_res_list = []
-    propagated_reversed_path_res_list = []
-
-    for i, pathreq in enumerate(pathreqlist):
-
-        # use the power specified in requests but might be different from the one
-        # specified for design the power is an optional parameter for requests
-        # definition if optional, use the one defines in eqt_config.json
-        p_db = lin2db(pathreq.power*1e3)
-        p_total_db = p_db + lin2db(pathreq.nb_channel)
-        print(f'request {pathreq.request_id}')
-        print(f'Computing path from {pathreq.source} to {pathreq.destination}')
-        # adding first node to be clearer on the output
-        print(f'with path constraint: {[pathreq.source] + pathreq.nodes_list}')
-
-        # pathlist[i] contains the whole path information for request i
-        # last element is a transciver and where the result of the propagation is
-        # recorded.
-        # Important Note: since transceivers attached to roadms are actually logical
-        # elements to simulate performance, several demands having the same destination
-        # may use the same transponder for the performance simulation. This is why
-        # we use deepcopy: to ensure that each propagation is recorded and not overwritten
-        total_path = deepcopy(pathlist[i])
-        print(f'Computed path (roadms):{[e.uid for e in total_path  if isinstance(e, Roadm)]}')
-        # for debug
-        # print(f'{pathreq.baud_rate}   {pathreq.power}   {pathreq.spacing}   {pathreq.nb_channel}')
-        if total_path:
-            if pathreq.baud_rate is not None:
-                # means that at this point the mode was entered/forced by user and thus a
-                # baud_rate was defined
-                total_path = propagate(total_path, pathreq, equipment)
-                temp_snr01nm = round(mean(total_path[-1].snr+lin2db(pathreq.baud_rate/(12.5e9))), 2)
-                if temp_snr01nm < pathreq.OSNR:
-                    msg = f'\tWarning! Request {pathreq.request_id} computed path from' +\
-                          f' {pathreq.source} to {pathreq.destination} does not pass with' +\
-                          f' {pathreq.tsp_mode}\n\tcomputedSNR in 0.1nm = {temp_snr01nm} ' +\
-                          f'- required osnr {pathreq.OSNR}'
-                    print(msg)
-                    LOGGER.warning(msg)
-                    pathreq.blocking_reason = 'MODE_NOT_FEASIBLE'
-            else:
-                total_path, mode = propagate_and_optimize_mode(total_path, pathreq, equipment)
-                # if no baudrate satisfies spacing, no mode is returned and the last explored mode
-                # a warning is shown in the propagate_and_optimize_mode
-                # propagate_and_optimize_mode function returns the mode with the highest bitrate
-                # that passes. if no mode passes, then a attribute blocking_reason is added on
-                # pathreq that contains the reason for blocking: 'NO_PATH', 'NO_FEASIBLE_MODE', ...
-                try:
-                    if pathreq.blocking_reason in BLOCKING_NOPATH:
-                        total_path = []
-                    elif pathreq.blocking_reason in BLOCKING_NOMODE:
-                        pathreq.baud_rate = mode['baud_rate']
-                        pathreq.tsp_mode = mode['format']
-                        pathreq.format = mode['format']
-                        pathreq.OSNR = mode['OSNR']
-                        pathreq.tx_osnr = mode['tx_osnr']
-                        pathreq.bit_rate = mode['bit_rate']
-                    # other blocking reason should not appear at this point
-                except AttributeError:
-                    pathreq.baud_rate = mode['baud_rate']
-                    pathreq.tsp_mode = mode['format']
-                    pathreq.format = mode['format']
-                    pathreq.OSNR = mode['OSNR']
-                    pathreq.tx_osnr = mode['tx_osnr']
-                    pathreq.bit_rate = mode['bit_rate']
-
-            # reversed path is needed for correct spectrum assignment
-            reversed_path = find_reversed_path(pathlist[i])
-            if pathreq.bidir:
-                # only propagate if bidir is true, but needs the reversed path anyway for
-                # correct spectrum assignment
-                rev_p = deepcopy(reversed_path)
-
-                print(f'\n\tPropagating Z to A direction {pathreq.destination} to {pathreq.source}')
-                print(f'\tPath (roadsm) {[r.uid for r in rev_p if isinstance(r,Roadm)]}\n')
-                propagated_reversed_path = propagate(rev_p, pathreq, equipment)
-                temp_snr01nm = round(mean(propagated_reversed_path[-1].snr +\
-                                          lin2db(pathreq.baud_rate/(12.5e9))), 2)
-                if temp_snr01nm < pathreq.OSNR:
-                    msg = f'\tWarning! Request {pathreq.request_id} computed path from' +\
-                          f' {pathreq.source} to {pathreq.destination} does not pass with' +\
-                          f' {pathreq.tsp_mode}\n' +\
-                          f'\tcomputedSNR in 0.1nm = {temp_snr01nm} - required osnr {pathreq.OSNR}'
-                    print(msg)
-                    LOGGER.warning(msg)
-                    # TODO selection of mode should also be on reversed direction !!
-                    pathreq.blocking_reason = 'MODE_NOT_FEASIBLE'
-            else:
-                propagated_reversed_path = []
-        else:
-            msg = 'Total path is empty. No propagation'
-            print(msg)
-            LOGGER.info(msg)
-            reversed_path = []
-            propagated_reversed_path = []
-
-        path_res_list.append(total_path)
-        reversed_path_res_list.append(reversed_path)
-        propagated_reversed_path_res_list.append(propagated_reversed_path)
-        # print to have a nice output
-        print('')
-    return path_res_list, reversed_path_res_list, propagated_reversed_path_res_list
-
-def correct_route_list(network, pathreqlist):
-    """ prepares the format of route list of nodes to be consistant
-        remove wrong names, remove endpoints
-        also correct source and destination
-    """
-    anytype = [n.uid for n in network.nodes()]
-    # TODO there is a problem of identification of fibers in case of parallel fibers
-    # between two adjacent roadms so fiber constraint is not supported
-    transponders = [n.uid for n in network.nodes() if isinstance(n, Transceiver)]
-    for pathreq in pathreqlist:
-        for i, n_id in enumerate(pathreq.nodes_list):
-            # replace possibly wrong name with a formated roadm name
-            # print(n_id)
-            if n_id not in anytype:
-                # find nodes name that include constraint among all possible names except
-                # transponders (not yet supported as constraints).
-                nodes_suggestion = [uid for uid in anytype \
-                    if n_id.lower() in uid.lower() and uid not in transponders]
-                if pathreq.loose_list[i] == 'LOOSE':
-                    if len(nodes_suggestion) > 0:
-                        new_n = nodes_suggestion[0]
-                        print(f'invalid route node specified:\
-                        \n\'{n_id}\', replaced with \'{new_n}\'')
-                        pathreq.nodes_list[i] = new_n
-                    else:
-                        print(f'\x1b[1;33;40m'+f'invalid route node specified \'{n_id}\',' +\
-                              f' could not use it as constraint, skipped!'+'\x1b[0m')
-                        pathreq.nodes_list.remove(n_id)
-                        pathreq.loose_list.pop(i)
-                else:
-                    msg = f'\x1b[1;33;40m'+f'could not find node: {n_id} in network topology.' +\
-                          f' Strict constraint can not be applied.' + '\x1b[0m'
-                    LOGGER.critical(msg)
-                    raise ValueError(msg)
-        if pathreq.source not in transponders:
-            msg = f'\x1b[1;31;40m' + f'Request: {pathreq.request_id}: could not find' +\
-                  f' transponder source: {pathreq.source}.'+'\x1b[0m'
-            LOGGER.critical(msg)
-            print(f'{msg}\nComputation stopped.')
-            raise ServiceError(msg)
-
-        if pathreq.destination not in transponders:
-            msg = f'\x1b[1;31;40m'+f'Request: {pathreq.request_id}: could not find' +\
-                  f' transponder destination: {pathreq.destination}.'+'\x1b[0m'
-            LOGGER.critical(msg)
-            print(f'{msg}\nComputation stopped.')
-            raise ServiceError(msg)
-
-        # TODO remove endpoints from this list in case they were added by the user
-        # in the xls or json files
-    return pathreqlist
-
-def correct_disjn(disjn):
-    """ clean disjunctions to remove possible repetition
-    """
-    local_disjn = disjn.copy()
-    for elem in local_disjn:
-        for dis_elem in local_disjn:
-            if set(elem.disjunctions_req) == set(dis_elem.disjunctions_req) and\
-             elem.disjunction_id != dis_elem.disjunction_id:
-                local_disjn.remove(dis_elem)
-    return local_disjn
-
-
-def path_result_json(pathresult):
-    """ create the response dictionnary
-    """
-    data = {
-        'response': [n.json for n in pathresult]
-    }
-    return data
-
-def main(args):
-    """ main function that calls all functions
-    """
-    LOGGER.info(f'Computing path requests {args.service_filename} into JSON format')
-    print('\x1b[1;34;40m' +\
-          f'Computing path requests {args.service_filename} into JSON format'+ '\x1b[0m')
-    # for debug
-    # print( args.eqpt_filename)
-
-    try:
-        data = load_requests(args.service_filename, args.eqpt_filename, args.bidir)
-        equipment = load_equipment(args.eqpt_filename)
-        network = load_network(args.network_filename, equipment)
-    except EquipmentConfigError as this_e:
-        print(f'{ansi_escapes.red}Configuration error in the equipment library:{ansi_escapes.reset} {this_e}')
-        exit(1)
-    except NetworkTopologyError as this_e:
-        print(f'{ansi_escapes.red}Invalid network definition:{ansi_escapes.reset} {this_e}')
-        exit(1)
-    except ConfigurationError as this_e:
-        print(f'{ansi_escapes.red}Configuration error:{ansi_escapes.reset} {this_e}')
-        exit(1)
-    except ServiceError as this_e:
-        print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {this_e}')
-        exit(1)
-
-    # Build the network once using the default power defined in SI in eqpt config
-    # TODO power density: db2linp(ower_dbm": 0)/power_dbm": 0 * nb channels as defined by
-    # spacing, f_min and f_max
-    p_db = equipment['SI']['default'].power_dbm
-
-    p_total_db = p_db + lin2db(automatic_nch(equipment['SI']['default'].f_min,\
-        equipment['SI']['default'].f_max, equipment['SI']['default'].spacing))
-    build_network(network, equipment, p_db, p_total_db)
-    save_network(args.network_filename, network)
-
-    oms_list = build_oms_list(network, equipment)
-
-    try:
-        rqs = requests_from_json(data, equipment)
-    except ServiceError as this_e:
-        print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {this_e}')
-        exit(1)
-    # check that request ids are unique. Non unique ids, may
-    # mess the computation: better to stop the computation
-    all_ids = [r.request_id for r in rqs]
-    if len(all_ids) != len(set(all_ids)):
-        for item in list(set(all_ids)):
-            all_ids.remove(item)
-        msg = f'Requests id {all_ids} are not unique'
-        LOGGER.critical(msg)
-        exit()
-    try:
-        rqs = correct_route_list(network, rqs)
-    except ServiceError as this_e:
-        print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {this_e}')
-        exit(1)
-    # pths = compute_path(network, equipment, rqs)
-    dsjn = disjunctions_from_json(data)
-
-    print('\x1b[1;34;40m' + f'List of disjunctions' + '\x1b[0m')
-    print(dsjn)
-    # need to warn or correct in case of wrong disjunction form
-    # disjunction must not be repeated with same or different ids
-    dsjn = correct_disjn(dsjn)
-
-    # Aggregate demands with same exact constraints
-    print('\x1b[1;34;40m' + f'Aggregating similar requests' + '\x1b[0m')
-
-    rqs, dsjn = requests_aggregation(rqs, dsjn)
-    # TODO export novel set of aggregated demands in a json file
-
-    print('\x1b[1;34;40m' + 'The following services have been requested:' + '\x1b[0m')
-    print(rqs)
-
-    print('\x1b[1;34;40m' + f'Computing all paths with constraints' + '\x1b[0m')
-    try:
-        pths = compute_path_dsjctn(network, equipment, rqs, dsjn)
-    except DisjunctionError as this_e:
-        print(f'{ansi_escapes.red}Disjunction error:{ansi_escapes.reset} {this_e}')
-        exit(1)
-
-    print('\x1b[1;34;40m' + f'Propagating on selected path' + '\x1b[0m')
-    propagatedpths, reversed_pths, reversed_propagatedpths = \
-        compute_path_with_disjunction(network, equipment, rqs, pths)
-    # Note that deepcopy used in compute_path_with_disjunction returns
-    # a list of nodes which are not belonging to network (they are copies of the node objects).
-    # so there can not be propagation on these nodes.
-
-    pth_assign_spectrum(pths, rqs, oms_list, reversed_pths)
-
-    print('\x1b[1;34;40m'+f'Result summary'+ '\x1b[0m')
-    header = ['req id', '  demand', '  snr@bandwidth A-Z (Z-A)', '  snr@0.1nm A-Z (Z-A)',\
-              '  Receiver minOSNR', '  mode', '  Gbit/s', '  nb of tsp pairs',\
-              'N,M or blocking reason']
-    data = []
-    data.append(header)
-    for i, this_p in enumerate(propagatedpths):
-        rev_pth = reversed_propagatedpths[i]
-        if rev_pth and this_p:
-            psnrb = f'{round(mean(this_p[-1].snr),2)} ({round(mean(rev_pth[-1].snr),2)})'
-            psnr = f'{round(mean(this_p[-1].snr_01nm), 2)}' +\
-                   f' ({round(mean(rev_pth[-1].snr_01nm),2)})'
-        elif this_p:
-            psnrb = f'{round(mean(this_p[-1].snr),2)}'
-            psnr = f'{round(mean(this_p[-1].snr_01nm),2)}'
-
-        try :
-            if rqs[i].blocking_reason in  BLOCKING_NOPATH:
-                line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} :',\
-                        f'-', f'-', f'-', f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9,2)}',\
-                        f'-', f'{rqs[i].blocking_reason}']
-            else:
-                line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} : ', psnrb,\
-                        psnr, f'-', f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9, 2)}',\
-                        f'-', f'{rqs[i].blocking_reason}']
-        except AttributeError:
-            line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} : ', psnrb,\
-                    psnr, f'{rqs[i].OSNR}', f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9,2)}',\
-                    f'{ceil(rqs[i].path_bandwidth / rqs[i].bit_rate) }', f'({rqs[i].N},{rqs[i].M})']
-        data.append(line)
-
-    col_width = max(len(word) for row in data for word in row[2:])   # padding
-    firstcol_width = max(len(row[0]) for row in data)   # padding
-    secondcol_width = max(len(row[1]) for row in data)   # padding
-    for row in data:
-        firstcol = ''.join(row[0].ljust(firstcol_width))
-        secondcol = ''.join(row[1].ljust(secondcol_width))
-        remainingcols = ''.join(word.center(col_width, ' ') for word in row[2:])
-        print(f'{firstcol} {secondcol} {remainingcols}')
-    print('\x1b[1;33;40m'+f'Result summary shows mean SNR and OSNR (average over all channels)' +\
-          '\x1b[0m')
-
-    if args.output:
-        result = []
-        # assumes that list of rqs and list of propgatedpths have same order
-        for i, pth in enumerate(propagatedpths):
-            result.append(Result_element(rqs[i], pth, reversed_propagatedpths[i]))
-        temp = path_result_json(result)
-        fnamecsv = f'{str(args.output)[0:len(str(args.output))-len(str(args.output.suffix))]}.csv'
-        fnamejson = f'{str(args.output)[0:len(str(args.output))-len(str(args.output.suffix))]}.json'
-        with open(fnamejson, 'w', encoding='utf-8') as fjson:
-            fjson.write(dumps(path_result_json(result), indent=2, ensure_ascii=False))
-            with open(fnamecsv, "w", encoding='utf-8') as fcsv:
-                jsontocsv(temp, equipment, fcsv)
-                print('\x1b[1;34;40m'+f'saving in {args.output} and {fnamecsv}'+ '\x1b[0m')
-
-
-if __name__ == '__main__':
-    ARGS = PARSER.parse_args()
-    basicConfig(level={2: DEBUG, 1: INFO, 0: CRITICAL}.get(ARGS.verbose, DEBUG))
-    main(ARGS)

examples/transmission_main_example.py

@@ -1,319 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-'''
-transmission_main_example.py
-============================
-
-Main example for transmission simulation.
-
-Reads from network JSON (by default, `edfa_example_network.json`)
-'''
-
-from gnpy.core.equipment import load_equipment, trx_mode_params
-from gnpy.core.utils import db2lin, lin2db, write_csv
-from argparse import ArgumentParser
-from sys import exit
-from pathlib import Path
-from json import loads
-from collections import Counter
-from logging import getLogger, basicConfig, INFO, ERROR, DEBUG
-from numpy import linspace, mean, log10
-from matplotlib.pyplot import show, axis, figure, title, text
-from networkx import (draw_networkx_nodes, draw_networkx_edges,
-                      draw_networkx_labels, dijkstra_path)
-from gnpy.core.network import load_network, build_network, save_network, load_sim_params, configure_network
-from gnpy.core.elements import Transceiver, Fiber, RamanFiber, Edfa, Roadm
-from gnpy.core.info import create_input_spectral_information, SpectralInformation, Channel, Power, Pref
-from gnpy.core.request import Path_request, RequestParams, compute_constrained_path, propagate2
-from gnpy.core.exceptions import ConfigurationError, EquipmentConfigError, NetworkTopologyError
-import gnpy.core.ansi_escapes as ansi_escapes
-
-logger = getLogger(__name__)
-
-def plot_baseline(network):
-    edges = set(network.edges())
-    pos = {n: (n.lng, n.lat) for n in network.nodes()}
-    labels = {n: n.location.city for n in network.nodes() if isinstance(n, Transceiver)}
-    city_labels = set(labels.values())
-    for n in network.nodes():
-        if n.location.city and n.location.city not in city_labels:
-            labels[n] = n.location.city
-            city_labels.add(n.location.city)
-    label_pos = pos
-
-    fig = figure()
-    kwargs = {'figure': fig, 'pos': pos}
-    plot = draw_networkx_nodes(network, nodelist=network.nodes(), node_color='#ababab', **kwargs)
-    draw_networkx_edges(network, edgelist=edges, edge_color='#ababab', **kwargs)
-    draw_networkx_labels(network, labels=labels, font_size=14, **{**kwargs, 'pos': label_pos})
-    axis('off')
-    show()
-
-def plot_results(network, path, source, destination, infos):
-    path_edges = set(zip(path[:-1], path[1:]))
-    edges = set(network.edges()) - path_edges
-    pos = {n: (n.lng, n.lat) for n in network.nodes()}
-    nodes = {}
-    for k, (x, y) in pos.items():
-        nodes.setdefault((round(x, 1), round(y, 1)), []).append(k)
-    labels = {n: n.location.city for n in network.nodes() if isinstance(n, Transceiver)}
-    city_labels = set(labels.values())
-    for n in network.nodes():
-        if n.location.city and n.location.city not in city_labels:
-            labels[n] = n.location.city
-            city_labels.add(n.location.city)
-    label_pos = pos
-
-    fig = figure()
-    kwargs = {'figure': fig, 'pos': pos}
-    all_nodes = [n for n in network.nodes() if n not in path]
-    plot = draw_networkx_nodes(network, nodelist=all_nodes, node_color='#ababab', node_size=50, **kwargs)
-    draw_networkx_nodes(network, nodelist=path, node_color='#ff0000', node_size=55, **kwargs)
-    draw_networkx_edges(network, edgelist=edges, edge_color='#ababab', **kwargs)
-    draw_networkx_edges(network, edgelist=path_edges, edge_color='#ff0000', **kwargs)
-    draw_networkx_labels(network, labels=labels, font_size=14, **{**kwargs, 'pos': label_pos})
-    title(f'Propagating from {source.loc.city} to {destination.loc.city}')
-    axis('off')
-
-    heading = 'Spectral Information\n\n'
-    textbox = text(0.85, 0.20, heading, fontsize=14, fontname='Ubuntu Mono',
-                   verticalalignment='top', transform=fig.axes[0].transAxes,
-                   bbox={'boxstyle': 'round', 'facecolor': 'wheat', 'alpha': 0.5})
-
-    msgs = {(x, y): heading + '\n\n'.join(str(n) for n in ns if n in path)
-            for (x, y), ns in nodes.items()}
-
-    def hover(event):
-        if event.xdata is None or event.ydata is None:
-            return
-        if fig.contains(event):
-            x, y = round(event.xdata, 1), round(event.ydata, 1)
-            if (x, y) in msgs:
-                textbox.set_text(msgs[x, y])
-            else:
-                textbox.set_text(heading)
-            fig.canvas.draw_idle()
-
-    fig.canvas.mpl_connect('motion_notify_event', hover)
-    show()
-
-
-def main(network, equipment, source, destination, sim_params, req=None):
-    result_dicts = {}
-    network_data = [{
-                    'network_name'  : str(args.filename),
-                    'source'        : source.uid,
-                    'destination'   : destination.uid
-                    }]
-    result_dicts.update({'network': network_data})
-    design_data = [{
-                    'power_mode'        : equipment['Span']['default'].power_mode,
-                    'span_power_range'  : equipment['Span']['default'].delta_power_range_db,
-                    'design_pch'        : equipment['SI']['default'].power_dbm,
-                    'baud_rate'         : equipment['SI']['default'].baud_rate
-                    }]
-    result_dicts.update({'design': design_data})
-    simulation_data = []
-    result_dicts.update({'simulation results': simulation_data})
-
-    power_mode = equipment['Span']['default'].power_mode
-    print('\n'.join([f'Power mode is set to {power_mode}',
-                     f'=> it can be modified in eqpt_config.json - Span']))
-
-    pref_ch_db = lin2db(req.power*1e3) #reference channel power / span (SL=20dB)
-    pref_total_db = pref_ch_db + lin2db(req.nb_channel) #reference total power / span (SL=20dB)
-    build_network(network, equipment, pref_ch_db, pref_total_db)
-    path = compute_constrained_path(network, req)
-
-    if len([s.length for s in path if isinstance(s, RamanFiber)]):
-        if sim_params is None:
-            print(f'{ansi_escapes.red}Invocation error:{ansi_escapes.reset} RamanFiber requires passing simulation params via --sim-params')
-            exit(1)
-        configure_network(network, sim_params)
-
-    spans = [s.length for s in path if isinstance(s, RamanFiber) or isinstance(s, Fiber)]
-    print(f'\nThere are {len(spans)} fiber spans over {sum(spans)/1000:.0f} km between {source.uid} and {destination.uid}')
-    print(f'\nNow propagating between {source.uid} and {destination.uid}:')
-
-    try:
-        p_start, p_stop, p_step = equipment['SI']['default'].power_range_db
-        p_num = abs(int(round((p_stop - p_start)/p_step))) + 1 if p_step != 0 else 1
-        power_range = list(linspace(p_start, p_stop, p_num))
-    except TypeError:
-        print('invalid power range definition in eqpt_config, should be power_range_db: [lower, upper, step]')
-        power_range = [0]
-
-    if not power_mode:
-        #power cannot be changed in gain mode
-        power_range = [0]
-    for dp_db in power_range:
-        req.power = db2lin(pref_ch_db + dp_db)*1e-3
-        if power_mode:
-            print(f'\nPropagating with input power = {ansi_escapes.cyan}{lin2db(req.power*1e3):.2f} dBm{ansi_escapes.reset}:')
-        else:
-            print(f'\nPropagating in {ansi_escapes.cyan}gain mode{ansi_escapes.reset}: power cannot be set manually')
-        infos = propagate2(path, req, equipment)
-        if len(power_range) == 1:
-            for elem in path:
-                print(elem)
-            if power_mode:
-                print(f'\nTransmission result for input power = {lin2db(req.power*1e3):.2f} dBm:')
-            else:
-                print(f'\nTransmission results:')
-            print(f'  Final SNR total (0.1 nm): {ansi_escapes.cyan}{mean(destination.snr_01nm):.02f} dB{ansi_escapes.reset}')
-        else:
-            print(path[-1])
-
-        #print(f'\n !!!!!!!!!!!!!!!!!     TEST POINT         !!!!!!!!!!!!!!!!!!!!!')
-        #print(f'carriers ase output of {path[1]} =\n {list(path[1].carriers("out", "nli"))}')
-        # => use "in" or "out" parameter
-        # => use "nli" or "ase" or "signal" or "total" parameter        
-        if power_mode:
-            simulation_data.append({
-                        'Pch_dBm'               : pref_ch_db + dp_db,
-                        'OSNR_ASE_0.1nm'        : round(mean(destination.osnr_ase_01nm),2),
-                        'OSNR_ASE_signal_bw'    : round(mean(destination.osnr_ase),2),
-                        'SNR_nli_signal_bw'     : round(mean(destination.osnr_nli),2),
-                        'SNR_total_signal_bw'   : round(mean(destination.snr),2)
-                                })
-        else:
-            simulation_data.append({
-                        'gain_mode'             : 'power canot be set',
-                        'OSNR_ASE_0.1nm'        : round(mean(destination.osnr_ase_01nm),2),
-                        'OSNR_ASE_signal_bw'    : round(mean(destination.osnr_ase),2),
-                        'SNR_nli_signal_bw'     : round(mean(destination.osnr_nli),2),
-                        'SNR_total_signal_bw'   : round(mean(destination.snr),2)
-                                })
-    write_csv(result_dicts, 'simulation_result.csv')
-    return path, infos
-
-
-parser = ArgumentParser()
-parser.add_argument('-e', '--equipment', type=Path,
-                    default=Path(__file__).parent / 'eqpt_config.json')
-parser.add_argument('--sim-params', type=Path,
-                    default=None, help='Path to the JSON containing simulation parameters (required for Raman)')
-parser.add_argument('--show-channels', action='store_true', help='Show final per-channel OSNR summary')
-parser.add_argument('-pl', '--plot', action='store_true')
-parser.add_argument('-v', '--verbose', action='count', default=0, help='increases verbosity for each occurence')
-parser.add_argument('-l', '--list-nodes', action='store_true', help='list all transceiver nodes')
-parser.add_argument('-po', '--power', default=0, help='channel ref power in dBm')
-parser.add_argument('-names', '--names-matching', action='store_true', help='display network names that are closed matches')
-parser.add_argument('filename', nargs='?', type=Path,
-                    default=Path(__file__).parent / 'edfa_example_network.json')
-parser.add_argument('source', nargs='?', help='source node')
-parser.add_argument('destination',   nargs='?', help='destination node')
-
-
-if __name__ == '__main__':
-    args = parser.parse_args()
-    basicConfig(level={0: ERROR, 1: INFO, 2: DEBUG}.get(args.verbose, DEBUG))
-
-    try:
-        equipment = load_equipment(args.equipment)
-        network = load_network(args.filename, equipment, args.names_matching)
-        sim_params = load_sim_params(args.sim_params) if args.sim_params is not None else None
-    except EquipmentConfigError as e:
-        print(f'{ansi_escapes.red}Configuration error in the equipment library:{ansi_escapes.reset} {e}')
-        exit(1)
-    except NetworkTopologyError as e:
-        print(f'{ansi_escapes.red}Invalid network definition:{ansi_escapes.reset} {e}')
-        exit(1)
-    except ConfigurationError as e:
-        print(f'{ansi_escapes.red}Configuration error:{ansi_escapes.reset} {e}')
-        exit(1)
-
-    if args.plot:
-        plot_baseline(network)
-
-    transceivers = {n.uid: n for n in network.nodes() if isinstance(n, Transceiver)}
-
-    if not transceivers:
-        exit('Network has no transceivers!')
-    if len(transceivers) < 2:
-        exit('Network has only one transceiver!')
-
-    if args.list_nodes:
-        for uid in transceivers:
-            print(uid)
-        exit()
-
-    #First try to find exact match if source/destination provided
-    if args.source:
-        source = transceivers.pop(args.source, None)
-        valid_source = True if source else False
-    else:
-        source = None
-        logger.info('No source node specified: picking random transceiver')
-
-    if args.destination:
-        destination = transceivers.pop(args.destination, None)
-        valid_destination = True if destination else False
-    else:
-        destination = None
-        logger.info('No destination node specified: picking random transceiver')
-
-    #If no exact match try to find partial match
-    if args.source and not source:
-        #TODO code a more advanced regex to find nodes match
-        source = next((transceivers.pop(uid) for uid in transceivers \
-                  if args.source.lower() in uid.lower()), None)
-
-    if args.destination and not destination:
-        #TODO code a more advanced regex to find nodes match
-        destination = next((transceivers.pop(uid) for uid in transceivers \
-                  if args.destination.lower() in uid.lower()), None)
-
-    #If no partial match or no source/destination provided pick random
-    if not source:
-        source = list(transceivers.values())[0]
-        del transceivers[source.uid]
-
-    if not destination:
-        destination = list(transceivers.values())[0]
-
-    logger.info(f'source = {args.source!r}')
-    logger.info(f'destination = {args.destination!r}')
-
-    params = {}
-    params['request_id'] = 0
-    params['trx_type'] = ''
-    params['trx_mode'] = ''
-    params['source'] = source.uid
-    params['destination'] = destination.uid
-    params['bidir'] = False
-    params['nodes_list'] = [destination.uid]
-    params['loose_list'] = ['strict']
-    params['format'] = ''
-    params['path_bandwidth'] = 0
-    trx_params = trx_mode_params(equipment)
-    if args.power:
-        trx_params['power'] = db2lin(float(args.power))*1e-3
-    params.update(trx_params)
-    req = Path_request(**params)
-    path, infos = main(network, equipment, source, destination, sim_params, req)
-    save_network(args.filename, network)
-
-    if args.show_channels:
-        print('\nThe total SNR per channel at the end of the line is:')
-        print('{:>5}{:>26}{:>26}{:>28}{:>28}{:>28}' \
-            .format('Ch. #', 'Channel frequency (THz)', 'Channel power (dBm)', 'OSNR ASE (signal bw, dB)', 'SNR NLI (signal bw, dB)', 'SNR total (signal bw, dB)'))
-        for final_carrier, ch_osnr, ch_snr_nl, ch_snr in zip(infos[path[-1]][1].carriers, path[-1].osnr_ase, path[-1].osnr_nli, path[-1].snr):
-            ch_freq = final_carrier.frequency * 1e-12
-            ch_power = lin2db(final_carrier.power.signal*1e3)
-            print('{:5}{:26.2f}{:26.2f}{:28.2f}{:28.2f}{:28.2f}' \
-                .format(final_carrier.channel_number, round(ch_freq, 2), round(ch_power, 2), round(ch_osnr, 2), round(ch_snr_nl, 2), round(ch_snr, 2)))
-
-    if not args.source:
-        print(f'\n(No source node specified: picked {source.uid})')
-    elif not valid_source:
-        print(f'\n(Invalid source node {args.source!r} replaced with {source.uid})')
-
-    if not args.destination:
-        print(f'\n(No destination node specified: picked {destination.uid})')
-    elif not valid_destination:
-        print(f'\n(Invalid destination node {args.destination!r} replaced with {destination.uid})')
-
-    if args.plot:
-        plot_results(network, path, source, destination, infos)

gnpy/__init__.py

@@ -0,0 +1,8 @@
+'''
+GNPy is an open-source, community-developed library for building route planning and optimization tools in real-world mesh optical networks. It is based on the Gaussian Noise Model.
+
+Signal propagation is implemented in :py:mod:`.core`.
+Path finding and spectrum assignment is in :py:mod:`.topology`.
+Various tools and auxiliary code, including the JSON I/O handling, is in
+:py:mod:`.tools`.
+'''

gnpy/api/__init__.py

@@ -0,0 +1,9 @@
+# coding: utf-8
+from flask import Flask
+
+app = Flask(__name__)
+
+import gnpy.api.route.path_request_route
+import gnpy.api.route.status_route
+import gnpy.api.route.topology_route
+import gnpy.api.route.equipments_route

gnpy/api/exception/__init__.py

@@ -0,0 +1 @@
+# coding: utf-8

gnpy/api/exception/config_error.py

@@ -0,0 +1,14 @@
+# coding: utf-8
+
+
+class ConfigError(Exception):
+    """ Exception raise for configuration file error
+    Attributes:
+        message -- explanation of the error
+    """
+
+    def __init__(self, message):
+        self.message = message
+
+    def __str__(self):
+        return self.message

gnpy/api/exception/equipment_error.py

@@ -0,0 +1,14 @@
+# coding: utf-8
+
+
+class EquipmentError(Exception):
+    """ Exception raise for equipment error
+    Attributes:
+        message -- explanation of the error
+    """
+
+    def __init__(self, message):
+        self.message = message
+
+    def __str__(self):
+        return self.message

gnpy/api/exception/exception_handler.py

@@ -0,0 +1,33 @@
+# coding: utf-8
+import json
+import re
+
+import werkzeug
+
+from gnpy.api.model.error import Error
+
+_reaesc = re.compile(r'\x1b[^m]*m')
+
+
+def common_error_handler(exception):
+    """
+
+    :type exception: Exception
+
+    """
+    status_code = 500
+    if not isinstance(exception, werkzeug.exceptions.HTTPException):
+        exception = werkzeug.exceptions.InternalServerError()
+        exception.description = "Something went wrong on our side."
+    else:
+        status_code = exception.code
+    response = Error(message=exception.name, description=exception.description,
+                     code=status_code)
+
+    return werkzeug.Response(response=json.dumps(response.__dict__), status=status_code, mimetype='application/json')
+
+
+def bad_request_handler(exception):
+    response = Error(message='bad request', description=_reaesc.sub('', str(exception)),
+                     code=400)
+    return werkzeug.Response(response=json.dumps(response.__dict__), status=400, mimetype='application/json')

gnpy/api/exception/path_computation_error.py

@@ -0,0 +1,14 @@
+# coding: utf-8
+
+
+class PathComputationError(Exception):
+    """ Exception raise for path computation error error
+    Attributes:
+        message -- explanation of the error
+    """
+
+    def __init__(self, message):
+        self.message = message
+
+    def __str__(self):
+        return self.message

gnpy/api/exception/topology_error.py

@@ -0,0 +1,14 @@
+# coding: utf-8
+
+
+class TopologyError(Exception):
+    """ Exception raise for topology error
+    Attributes:
+        message -- explanation of the error
+    """
+
+    def __init__(self, message):
+        self.message = message
+
+    def __str__(self):
+        return self.message

gnpy/api/model/__init__.py

@@ -0,0 +1 @@
+# coding: utf-8

gnpy/api/model/error.py

@@ -0,0 +1,17 @@
+# coding: utf-8
+
+
+class Error:
+
+    def __init__(self, code: int = None, message: str = None, description: str = None):
+        """Error
+        :param code: The code of this Error.
+        :type code: int
+        :param message: The message of this Error.
+        :type message: str
+        :param description: The description of this Error.
+        :type description: str
+        """
+        self.code = code
+        self.message = message
+        self.description = description

gnpy/api/model/result.py

@@ -0,0 +1,8 @@
+# coding: utf-8
+
+
+class Result:
+
+    def __init__(self, message: str = None, description: str = None):
+        self.message = message
+        self.description = description

gnpy/api/rest_example.py

@@ -0,0 +1,83 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+'''
+gnpy.tools.rest_example
+=======================
+
+GNPy as a rest API example
+'''
+
+import logging
+from logging.handlers import RotatingFileHandler
+
+import werkzeug
+from flask_injector import FlaskInjector
+from injector import singleton
+from werkzeug.exceptions import InternalServerError
+
+import gnpy.core.exceptions as exceptions
+from gnpy.api import app
+from gnpy.api.exception.exception_handler import bad_request_handler, common_error_handler
+from gnpy.api.exception.path_computation_error import PathComputationError
+from gnpy.api.exception.topology_error import TopologyError
+from gnpy.api.service import config_service
+from gnpy.api.service.encryption_service import EncryptionService
+from gnpy.api.service.equipment_service import EquipmentService
+from gnpy.api.service.path_request_service import PathRequestService
+
+_logger = logging.getLogger(__name__)
+
+
+def _init_logger():
+    handler = RotatingFileHandler('api.log', maxBytes=1024 * 1024, backupCount=5, encoding='utf-8')
+    ch = logging.StreamHandler()
+    logging.basicConfig(level=logging.INFO, handlers=[handler, ch],
+                        format="%(asctime)s %(levelname)s %(name)s(%(lineno)s) [%(threadName)s - %(thread)d] - %("
+                               "message)s")
+
+
+def _init_app(key):
+    app.register_error_handler(KeyError, bad_request_handler)
+    app.register_error_handler(TypeError, bad_request_handler)
+    app.register_error_handler(ValueError, bad_request_handler)
+    app.register_error_handler(exceptions.ConfigurationError, bad_request_handler)
+    app.register_error_handler(exceptions.DisjunctionError, bad_request_handler)
+    app.register_error_handler(exceptions.EquipmentConfigError, bad_request_handler)
+    app.register_error_handler(exceptions.NetworkTopologyError, bad_request_handler)
+    app.register_error_handler(exceptions.ServiceError, bad_request_handler)
+    app.register_error_handler(exceptions.SpectrumError, bad_request_handler)
+    app.register_error_handler(exceptions.ParametersError, bad_request_handler)
+    app.register_error_handler(AssertionError, bad_request_handler)
+    app.register_error_handler(InternalServerError, common_error_handler)
+    app.register_error_handler(TopologyError, bad_request_handler)
+    app.register_error_handler(PathComputationError, bad_request_handler)
+    for error_code in werkzeug.exceptions.default_exceptions:
+        app.register_error_handler(error_code, common_error_handler)
+    config = config_service.init_config()
+    config.add_section('SECRET')
+    config.set('SECRET', 'equipment', key)
+    app.config['properties'] = config
+
+
+def _configure(binder):
+    binder.bind(EquipmentService,
+                to=EquipmentService(EncryptionService(app.config['properties'].get('SECRET', 'equipment'))),
+                scope=singleton)
+    binder.bind(PathRequestService,
+                to=PathRequestService(EncryptionService(app.config['properties'].get('SECRET', 'equipment'))),
+                scope=singleton)
+    app.config['properties'].pop('SECRET', None)
+
+
+def main():
+    key = input('Enter encryption/decryption key: ')
+    _init_logger()
+    _init_app(key)
+    FlaskInjector(app=app, modules=[_configure])
+
+    app.run(host='0.0.0.0', port=8080, ssl_context='adhoc')
+
+
+if __name__ == '__main__':
+    main()

gnpy/api/route/__init__.py

@@ -0,0 +1,2 @@
+# coding: utf-8
+

gnpy/api/route/equipments_route.py

@@ -0,0 +1,38 @@
+# coding: utf-8
+import http
+import json
+
+from flask import request
+
+from gnpy.api import app
+from gnpy.api.exception.equipment_error import EquipmentError
+from gnpy.api.model.result import Result
+from gnpy.api.service.equipment_service import EquipmentService
+
+EQUIPMENT_BASE_PATH = '/api/v1/equipments'
+EQUIPMENT_ID_PATH = EQUIPMENT_BASE_PATH + '/<equipment_id>'
+
+
+@app.route(EQUIPMENT_BASE_PATH, methods=['POST'])
+def create_equipment(equipment_service: EquipmentService):
+    if not request.is_json:
+        raise EquipmentError('Request body is not json')
+    equipment_identifier = equipment_service.save_equipment(request.json)
+    response = Result(message='Equipment creation ok', description=equipment_identifier)
+    return json.dumps(response.__dict__), 201, {'location': EQUIPMENT_BASE_PATH + '/' + equipment_identifier}
+
+
+@app.route(EQUIPMENT_ID_PATH, methods=['PUT'])
+def update_equipment(equipment_id, equipment_service: EquipmentService):
+    if not request.is_json:
+        raise EquipmentError('Request body is not json')
+    equipment_identifier = equipment_service.update_equipment(request.json, equipment_id)
+    response = Result(message='Equipment update ok', description=equipment_identifier)
+    return json.dumps(response.__dict__), http.HTTPStatus.OK, {
+        'location': EQUIPMENT_BASE_PATH + '/' + equipment_identifier}
+
+
+@app.route(EQUIPMENT_ID_PATH, methods=['DELETE'])
+def delete_equipment(equipment_id, equipment_service: EquipmentService):
+    equipment_service.delete_equipment(equipment_id)
+    return '', http.HTTPStatus.NO_CONTENT

gnpy/api/route/path_request_route.py

@@ -0,0 +1,63 @@
+# coding: utf-8
+import http
+import os
+from pathlib import Path
+
+from flask import request
+
+from gnpy.api import app
+from gnpy.api.exception.equipment_error import EquipmentError
+from gnpy.api.exception.topology_error import TopologyError
+from gnpy.api.service import topology_service
+from gnpy.api.service.equipment_service import EquipmentService
+from gnpy.api.service.path_request_service import PathRequestService
+from gnpy.tools.json_io import _equipment_from_json, network_from_json
+from gnpy.topology.request import ResultElement
+
+PATH_COMPUTATION_BASE_PATH = '/api/v1/path-computation'
+AUTODESIGN_PATH = PATH_COMPUTATION_BASE_PATH + '/<path_computation_id>/autodesign'
+
+_examples_dir = Path(__file__).parent.parent.parent / 'example-data'
+
+
+@app.route(PATH_COMPUTATION_BASE_PATH, methods=['POST'])
+def compute_path(equipment_service: EquipmentService, path_request_service: PathRequestService):
+    data = request.json
+    service = data['gnpy-api:service']
+    if 'gnpy-api:topology' in data:
+        topology = data['gnpy-api:topology']
+    elif 'gnpy-api:topology_id' in data:
+        topology = topology_service.get_topology(data['gnpy-api:topology_id'])
+    else:
+        raise TopologyError('No topology found in request')
+    if 'gnpy-api:equipment' in data:
+        equipment = data['gnpy-api:equipment']
+    elif 'gnpy-api:equipment_id' in data:
+        equipment = equipment_service.get_equipment(data['gnpy-api:equipment_id'])
+    else:
+        raise EquipmentError('No equipment found in request')
+    equipment = _equipment_from_json(equipment,
+                                     os.path.join(_examples_dir, 'std_medium_gain_advanced_config.json'))
+    network = network_from_json(topology, equipment)
+
+    propagatedpths, reversed_propagatedpths, rqs, path_computation_id = path_request_service.path_requests_run(service,
+                                                                                                               network,
+                                                                                                               equipment)
+    # Generate the output
+    result = []
+    # assumes that list of rqs and list of propgatedpths have same order
+    for i, pth in enumerate(propagatedpths):
+        result.append(ResultElement(rqs[i], pth, reversed_propagatedpths[i]))
+    return {"result": {"response": [n.json for n in result]}}, 201, {
+        'location': AUTODESIGN_PATH.replace('<path_computation_id>', path_computation_id)}
+
+
+@app.route(AUTODESIGN_PATH, methods=['GET'])
+def get_autodesign(path_computation_id, path_request_service: PathRequestService):
+    return path_request_service.get_autodesign(path_computation_id), http.HTTPStatus.OK
+
+
+@app.route(AUTODESIGN_PATH, methods=['DELETE'])
+def delete_autodesign(path_computation_id, path_request_service: PathRequestService):
+    path_request_service.delete_autodesign(path_computation_id)
+    return '', http.HTTPStatus.NO_CONTENT

gnpy/api/route/status_route.py

@@ -0,0 +1,7 @@
+# coding: utf-8
+from gnpy.api import app
+
+
+@app.route('/api/v1/status', methods=['GET'])
+def api_status():
+    return {"version": "v1", "status": "ok"}, 200

gnpy/api/route/topology_route.py

@@ -0,0 +1,43 @@
+# coding: utf-8
+import http
+import json
+
+from flask import request
+
+from gnpy.api import app
+from gnpy.api.exception.topology_error import TopologyError
+from gnpy.api.model.result import Result
+from gnpy.api.service import topology_service
+
+TOPOLOGY_BASE_PATH = '/api/v1/topologies'
+TOPOLOGY_ID_PATH = TOPOLOGY_BASE_PATH + '/<topology_id>'
+
+
+@app.route(TOPOLOGY_BASE_PATH, methods=['POST'])
+def create_topology():
+    if not request.is_json:
+        raise TopologyError('Request body is not json')
+    topology_identifier = topology_service.save_topology(request.json)
+    response = Result(message='Topology creation ok', description=topology_identifier)
+    return json.dumps(response.__dict__), 201, {'location': TOPOLOGY_BASE_PATH + '/' + topology_identifier}
+
+
+@app.route(TOPOLOGY_ID_PATH, methods=['PUT'])
+def update_topology(topology_id):
+    if not request.is_json:
+        raise TopologyError('Request body is not json')
+    topology_identifier = topology_service.update_topology(request.json, topology_id)
+    response = Result(message='Topology update ok', description=topology_identifier)
+    return json.dumps(response.__dict__), http.HTTPStatus.OK, {
+        'location': TOPOLOGY_BASE_PATH + '/' + topology_identifier}
+
+
+@app.route(TOPOLOGY_ID_PATH, methods=['GET'])
+def get_topology(topology_id):
+    return topology_service.get_topology(topology_id), http.HTTPStatus.OK
+
+
+@app.route(TOPOLOGY_ID_PATH, methods=['DELETE'])
+def delete_topology(topology_id):
+    topology_service.delete_topology(topology_id)
+    return '', http.HTTPStatus.NO_CONTENT

gnpy/api/service/__init__.py

@@ -0,0 +1 @@
+# coding: utf-8

gnpy/api/service/config_service.py

@@ -0,0 +1,45 @@
+# coding: utf-8
+import configparser
+import os
+
+from flask import current_app
+
+from gnpy.api.exception.config_error import ConfigError
+
+
+def init_config(properties_file_path: str = os.path.join(os.path.dirname(__file__),
+                                                         'properties.ini')) -> configparser.ConfigParser:
+    """
+    Read config from properties_file_path
+    @param properties_file_path: the properties file to read
+    @return: config parser
+    """
+    if not os.path.exists(properties_file_path):
+        raise ConfigError('Properties file does not exist ' + properties_file_path)
+    config = configparser.ConfigParser()
+    config.read(properties_file_path)
+    return config
+
+
+def get_topology_dir() -> str:
+    """
+    Get the base dir where topologies are saved
+    @return: the directory of topologies
+    """
+    return current_app.config['properties'].get('DIRECTORY', 'topology')
+
+
+def get_equipment_dir() -> str:
+    """
+    Get the base dir where equipments are saved
+    @return: the directory of equipments
+    """
+    return current_app.config['properties'].get('DIRECTORY', 'equipment')
+
+
+def get_autodesign_dir() -> str:
+    """
+    Get the base dir where autodesign are saved
+    @return: the directory of equipments
+    """
+    return current_app.config['properties'].get('DIRECTORY', 'autodesign')

gnpy/api/service/encryption_service.py

@@ -0,0 +1,13 @@
+# coding: utf-8
+from cryptography.fernet import Fernet
+
+
+class EncryptionService:
+    def __init__(self, key):
+        self._fernet = Fernet(key)
+
+    def encrypt(self, data):
+        return self._fernet.encrypt(data)
+
+    def decrypt(self, data):
+        return self._fernet.decrypt(data)

gnpy/api/service/equipment_service.py

@@ -0,0 +1,66 @@
+# coding: utf-
+import json
+import os
+import uuid
+
+from injector import Inject
+
+from gnpy.api.exception.equipment_error import EquipmentError
+from gnpy.api.service import config_service
+from gnpy.api.service.encryption_service import EncryptionService
+
+
+class EquipmentService:
+
+    def __init__(self, encryption_service: EncryptionService):
+        self.encryption = encryption_service
+
+    def save_equipment(self, equipment):
+        """
+        Save equipment to file.
+        @param equipment: json content
+        @return: a UUID identifier to identify the equipment
+        """
+        equipment_identifier = str(uuid.uuid4())
+        # TODO: validate json content
+        self._write_equipment(equipment, equipment_identifier)
+        return equipment_identifier
+
+    def update_equipment(self, equipment, equipment_identifier):
+        """
+        Update equipment with identifier equipment_identifier.
+        @param equipment_identifier: the identifier of the equipment to be updated
+        @param equipment: json content
+        @return: a UUID identifier to identify the equipment
+        """
+        # TODO: validate json content
+        self._write_equipment(equipment, equipment_identifier)
+        return equipment_identifier
+
+    def _write_equipment(self, equipment, equipment_identifier):
+        equipment_dir = config_service.get_equipment_dir()
+        with(open(os.path.join(equipment_dir, '.'.join([equipment_identifier, 'json'])), 'wb')) as file:
+            file.write(self.encryption.encrypt(json.dumps(equipment).encode()))
+
+    def get_equipment(self, equipment_id: str) -> dict:
+        """
+        Get the equipment with id equipment_id
+        @param equipment_id:
+        @return: the equipment in json format
+        """
+        equipment_dir = config_service.get_equipment_dir()
+        equipment_file = os.path.join(equipment_dir, '.'.join([equipment_id, 'json']))
+        if not os.path.exists(equipment_file):
+            raise EquipmentError('Equipment with id {} does not exist '.format(equipment_id))
+        with(open(equipment_file, 'rb')) as file:
+            return json.loads(self.encryption.decrypt(file.read()))
+
+    def delete_equipment(self, equipment_id: str):
+        """
+        Delete equipment with id equipment_id
+        @param equipment_id:
+        """
+        equipment_dir = config_service.get_equipment_dir()
+        equipment_file = os.path.join(equipment_dir, '.'.join([equipment_id, 'json']))
+        if os.path.exists(equipment_file):
+            os.remove(equipment_file)

gnpy/api/service/path_request_service.py

@@ -0,0 +1,100 @@
+# -*- coding: utf-8 -*-
+import json
+import logging
+import os
+import uuid
+
+import gnpy.core.ansi_escapes as ansi_escapes
+from gnpy.api.exception.path_computation_error import PathComputationError
+from gnpy.api.service import config_service
+from gnpy.api.service.encryption_service import EncryptionService
+from gnpy.core.network import build_network
+from gnpy.core.utils import lin2db, automatic_nch
+from gnpy.tools.json_io import requests_from_json, disjunctions_from_json, network_to_json
+from gnpy.topology.request import (compute_path_dsjctn, requests_aggregation,
+                                   correct_json_route_list,
+                                   deduplicate_disjunctions, compute_path_with_disjunction)
+from gnpy.topology.spectrum_assignment import build_oms_list, pth_assign_spectrum
+
+_logger = logging.getLogger(__name__)
+
+
+class PathRequestService:
+
+    def __init__(self, encryption_service: EncryptionService):
+        self.encryption = encryption_service
+
+    def path_requests_run(self, service, network, equipment):
+        # Build the network once using the default power defined in SI in eqpt config
+        # TODO power density: db2linp(ower_dbm": 0)/power_dbm": 0 * nb channels as defined by
+        # spacing, f_min and f_max
+        p_db = equipment['SI']['default'].power_dbm
+
+        p_total_db = p_db + lin2db(automatic_nch(equipment['SI']['default'].f_min,
+                                                 equipment['SI']['default'].f_max, equipment['SI']['default'].spacing))
+        build_network(network, equipment, p_db, p_total_db)
+        path_computation_identifier = str(uuid.uuid4())
+        autodesign_dir = config_service.get_autodesign_dir()
+        with(open(os.path.join(autodesign_dir, '.'.join([path_computation_identifier, 'json'])), 'wb')) as file:
+            file.write(self.encryption.encrypt(json.dumps(network_to_json(network)).encode()))
+        oms_list = build_oms_list(network, equipment)
+        rqs = requests_from_json(service, equipment)
+
+        # check that request ids are unique. Non unique ids, may
+        # mess the computation: better to stop the computation
+        all_ids = [r.request_id for r in rqs]
+        if len(all_ids) != len(set(all_ids)):
+            for item in list(set(all_ids)):
+                all_ids.remove(item)
+            msg = f'Requests id {all_ids} are not unique'
+            _logger.critical(msg)
+            raise ValueError('Requests id ' + all_ids + ' are not unique')
+        rqs = correct_json_route_list(network, rqs)
+
+        # pths = compute_path(network, equipment, rqs)
+        dsjn = disjunctions_from_json(service)
+
+        # need to warn or correct in case of wrong disjunction form
+        # disjunction must not be repeated with same or different ids
+        dsjn = deduplicate_disjunctions(dsjn)
+
+        rqs, dsjn = requests_aggregation(rqs, dsjn)
+        # TODO export novel set of aggregated demands in a json file
+
+        _logger.info(f'{ansi_escapes.blue}The following services have been requested:{ansi_escapes.reset}' + str(rqs))
+
+        _logger.info(f'{ansi_escapes.blue}Computing all paths with constraints{ansi_escapes.reset}')
+        pths = compute_path_dsjctn(network, equipment, rqs, dsjn)
+
+        _logger.info(f'{ansi_escapes.blue}Propagating on selected path{ansi_escapes.reset}')
+        propagatedpths, reversed_pths, reversed_propagatedpths = compute_path_with_disjunction(network, equipment, rqs,
+                                                                                               pths)
+        # Note that deepcopy used in compute_path_with_disjunction returns
+        # a list of nodes which are not belonging to network (they are copies of the node objects).
+        # so there can not be propagation on these nodes.
+
+        pth_assign_spectrum(pths, rqs, oms_list, reversed_pths)
+        return propagatedpths, reversed_propagatedpths, rqs, path_computation_identifier
+
+    def get_autodesign(self, path_computation_id):
+        """
+        Get the autodesign with id topology_id
+        @param path_computation_id:
+        @return: the autodesign in json format
+        """
+        autodesign_dir = config_service.get_autodesign_dir()
+        autodesign_file = os.path.join(autodesign_dir, '.'.join([path_computation_id, 'json']))
+        if not os.path.exists(autodesign_file):
+            raise PathComputationError('Autodesign with id {} does not exist '.format(path_computation_id))
+        with(open(autodesign_file, 'rb')) as file:
+            return json.loads(self.encryption.decrypt(file.read()))
+
+    def delete_autodesign(self, path_computation_id: str):
+        """
+        Delete autodesign with id equipment_id
+        @param path_computation_id:
+        """
+        autodesign_dir = config_service.get_autodesign_dir()
+        autodesign_file = os.path.join(autodesign_dir, '.'.join([path_computation_id, 'json']))
+        if os.path.exists(autodesign_file):
+            os.remove(autodesign_file)

gnpy/api/service/properties.ini

@@ -0,0 +1,4 @@
+[DIRECTORY]
+topology: /opt/application/oopt-gnpy/topology
+equipment: /opt/application/oopt-gnpy/equipment
+autodesign: /opt/application/oopt-gnpy/autodesign

gnpy/api/service/topology_service.py

@@ -0,0 +1,62 @@
+# coding: utf-
+import json
+import os
+import uuid
+
+from gnpy.api.exception.topology_error import TopologyError
+from gnpy.api.service import config_service
+
+
+def save_topology(topology):
+    """
+    Save topology to file.
+    @param topology: json content
+    @return: a UUID identifier to identify the topology
+    """
+    topology_identifier = str(uuid.uuid4())
+    # TODO: validate json content
+    _write_topology(topology, topology_identifier)
+    return topology_identifier
+
+
+def update_topology(topology, topology_identifier):
+    """
+    Update topology with identifier topology_identifier.
+    @param topology_identifier: the identifier of the topology to be updated
+    @param topology: json content
+    @return: a UUID identifier to identify the topology
+    """
+    # TODO: validate json content
+    _write_topology(topology, topology_identifier)
+    return topology_identifier
+
+
+def _write_topology(topology, topology_identifier):
+    topology_dir = config_service.get_topology_dir()
+    with(open(os.path.join(topology_dir, '.'.join([topology_identifier, 'json'])), 'w')) as file:
+        json.dump(topology, file)
+
+
+def get_topology(topology_id: str) -> dict:
+    """
+    Get the topology with id topology_id
+    @param topology_id:
+    @return: the topology in json format
+    """
+    topology_dir = config_service.get_topology_dir()
+    topology_file = os.path.join(topology_dir, '.'.join([topology_id, 'json']))
+    if not os.path.exists(topology_file):
+        raise TopologyError('Topology with id {} does not exist '.format(topology_id))
+    with(open(topology_file, 'r')) as file:
+        return json.load(file)
+
+
+def delete_topology(topology_id: str):
+    """
+    Delete topology with id topology_id
+    @param topology_id:
+    """
+    topology_dir = config_service.get_topology_dir()
+    topology_file = os.path.join(topology_dir, '.'.join([topology_id, 'json']))
+    if os.path.exists(topology_file):
+        os.remove(topology_file)

gnpy/core/__init__.py

@@ -1,30 +1,9 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-########################################################################
-#                _____ ___ ____    ____  ____  _____                   #
-#               |_   _|_ _|  _ \  |  _ \/ ___|| ____|                  #
-#                 | |  | || |_) | | |_) \___ \|  _|                    #
-#                 | |  | ||  __/  |  __/ ___) | |___                   #
-#                 |_| |___|_|     |_|   |____/|_____|                  #
-#                                                                      #
-#                == Physical Simulation Environment ==                 #
-#                                                                      #
-########################################################################
-
-
 '''
-gnpy route planning and optimization library
+Simulation of signal propagation in the DWDM network
-============================================
 
-gnpy is a route planning and optimization library, written in Python, for
+Optical signals, as defined via :class:`.info.SpectralInformation`, enter
-operators of large-scale mesh optical networks.
+:py:mod:`.elements` which compute how these signals are affected as they travel
-
+through the :py:mod:`.network`.
-:copyright: © 2018, Telecom Infra Project
+The simulation is controlled via :py:mod:`.parameters` and implemented mainly
-:license: BSD 3-Clause, see LICENSE for more details.
+via :py:mod:`.science_utils`.
 '''
-
-from . import elements
-from .execute import *
-from .network import *
-from .utils import *

gnpy/core/ansi_escapes.py

@@ -9,5 +9,7 @@ A random subset of ANSI terminal escape codes for colored messages
 '''
 
 red = '\x1b[1;31;40m'
+blue = '\x1b[1;34;40m'
 cyan = '\x1b[1;36;40m'
+yellow = '\x1b[1;33;40m'
 reset = '\x1b[0m'

gnpy/core/convert.py

@@ -1,631 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-"""
-gnpy.core.convert
-=================
-
-This module contains utilities for converting between XLS and JSON.
-
-The input XLS file must contain sheets named "Nodes" and "Links".
-It may optionally contain a sheet named "Eqpt".
-
-In the "Nodes" sheet, only the "City" column is mandatory. The column "Type"
-can be determined automatically given the topology (e.g., if degree 2, ILA;
-otherwise, ROADM.) Incorrectly specified types (e.g., ILA for node of
-degree ≠ 2) will be automatically corrected.
-
-In the "Links" sheet, only the first three columns ("Node A", "Node Z" and
-"east Distance (km)") are mandatory.  Missing "west" information is copied from
-the "east" information so that it is possible to input undirected data.
-"""
-
-from sys import exit
-try:
-    from xlrd import open_workbook
-except ModuleNotFoundError:
-    exit('Required: `pip install xlrd`')
-from argparse import ArgumentParser
-from collections import namedtuple, Counter, defaultdict
-from itertools import chain
-from json import dumps
-from pathlib import Path
-from difflib import get_close_matches
-from gnpy.core.utils import silent_remove
-from gnpy.core.exceptions import NetworkTopologyError
-import time
-
-all_rows = lambda sh, start=0: (sh.row(x) for x in range(start, sh.nrows))
-
-class Node(object):
-    def __init__(self, **kwargs):
-        super(Node, self).__init__()
-        self.update_attr(kwargs)
-
-    def update_attr(self, kwargs):
-        clean_kwargs = {k:v for k,v in kwargs.items() if v !=''}
-        for k,v in self.default_values.items():
-            v = clean_kwargs.get(k,v)
-            setattr(self, k, v)
-
-    default_values = \
-    {
-        'city':         '',
-        'state':        '',
-        'country':      '',
-        'region':       '',
-        'latitude':     0,
-        'longitude':    0,
-        'node_type':    'ILA',
-        'booster_restriction' : '',
-        'preamp_restriction'  : ''
-    }
-
-class Link(object):
-    """attribtes from west parse_ept_headers dict
-    +node_a, node_z, west_fiber_con_in, east_fiber_con_in
-    """
-    def __init__(self, **kwargs):
-        super(Link, self).__init__()
-        self.update_attr(kwargs)
-        self.distance_units = 'km'
-
-    def update_attr(self, kwargs):
-        clean_kwargs = {k:v for k,v in kwargs.items() if v !=''}
-        for k,v in self.default_values.items():
-            v = clean_kwargs.get(k,v)
-            setattr(self, k, v)
-            k = 'west' + k.split('east')[-1]
-            v = clean_kwargs.get(k,v)
-            setattr(self, k, v)
-
-    def __eq__(self, link):
-        return (self.from_city == link.from_city and self.to_city == link.to_city) \
-                or (self.from_city == link.to_city and self.to_city == link.from_city)
-
-    default_values = \
-    {
-            'from_city':            '',
-            'to_city':              '',
-            'east_distance':        80,
-            'east_fiber':           'SSMF',
-            'east_lineic':          0.2,
-            'east_con_in':          None,
-            'east_con_out':         None,
-            'east_pmd':             0.1,
-            'east_cable':           ''
-    }
-
-
-class Eqpt(object):
-    def __init__(self, **kwargs):
-        super(Eqpt, self).__init__()
-        self.update_attr(kwargs)
-
-    def update_attr(self, kwargs):
-        clean_kwargs = {k:v for k,v in kwargs.items() if v !=''}
-        for k,v in self.default_values.items():
-            v_east = clean_kwargs.get(k,v)
-            setattr(self, k, v_east)
-            k = 'west' + k.split('east')[-1]
-            v_west = clean_kwargs.get(k,v)
-            setattr(self, k, v_west)
-
-    default_values = \
-    {
-            'from_city':        '',
-            'to_city':          '',
-            'east_amp_type':    '',
-            'east_att_in':      0,
-            'east_amp_gain':    None,
-            'east_amp_dp':      None,
-            'east_tilt':        0,
-            'east_att_out':     None
-    }
-
-
-def read_header(my_sheet, line, slice_):
-    """ return the list of headers !:= ''
-    header_i = [(header, header_column_index), ...]
-    in a {line, slice1_x, slice_y} range
-    """
-    Param_header = namedtuple('Param_header', 'header colindex')
-    try:
-        header = [x.value.strip() for x in my_sheet.row_slice(line, slice_[0], slice_[1])]
-        header_i = [Param_header(header,i+slice_[0]) for i, header in enumerate(header) if header != '']
-    except Exception:
-        header_i = []
-    if header_i != [] and header_i[-1].colindex != slice_[1]:
-        header_i.append(Param_header('',slice_[1]))
-    return header_i
-
-def read_slice(my_sheet, line, slice_, header):
-    """return the slice range of a given header
-    in a defined range {line, slice_x, slice_y}"""
-    header_i = read_header(my_sheet, line, slice_)
-    slice_range = (-1,-1)
-    if header_i != []:
-        try:
-            slice_range = next((h.colindex,header_i[i+1].colindex) \
-                for i,h in enumerate(header_i) if header in h.header)
-        except Exception:
-            pass
-    return slice_range
-
-
-def parse_headers(my_sheet, input_headers_dict, headers, start_line, slice_in):
-    """return a dict of header_slice
-    key = column index
-    value = header name"""
-
-
-    for h0 in input_headers_dict:
-        slice_out = read_slice(my_sheet, start_line, slice_in, h0)
-        iteration = 1
-        while slice_out == (-1,-1) and iteration < 10:
-            #try next lines
-            #print(h0, iteration)
-            slice_out = read_slice(my_sheet, start_line+iteration, slice_in, h0)
-            iteration += 1
-        if slice_out == (-1, -1):
-            if h0 in ('east', 'Node A', 'Node Z', 'City') :
-                print(f'\x1b[1;31;40m'+f'CRITICAL: missing _{h0}_ header: EXECUTION ENDS'+ '\x1b[0m')
-                exit()
-            else:
-                print(f'missing header {h0}')
-        elif not isinstance(input_headers_dict[h0], dict):
-            headers[slice_out[0]] = input_headers_dict[h0]
-        else:
-            headers = parse_headers(my_sheet, input_headers_dict[h0], headers, start_line+1, slice_out)
-    if headers == {}:
-        print(f'\x1b[1;31;40m'+f'CRITICAL ERROR: could not find any header to read _ ABORT'+ '\x1b[0m')
-        exit()
-    return headers
-
-def parse_row(row, headers):
-    #print([label for label in ept.values()])
-    #print([i for i in ept.keys()])
-    #print(row[i for i in ept.keys()])
-    return {f: r.value for f, r in \
-            zip([label for label in headers.values()], [row[i] for i in headers])}
-            #if r.ctype != XL_CELL_EMPTY}
-
-def parse_sheet(my_sheet, input_headers_dict, header_line, start_line, column):
-    headers = parse_headers(my_sheet, input_headers_dict, {}, header_line, (0,column))
-    for row in all_rows(my_sheet, start=start_line):
-        yield parse_row(row[0: column], headers)
-
-def sanity_check(nodes, links, nodes_by_city, links_by_city, eqpts_by_city):
-
-    duplicate_links = []
-    for l1 in links:
-        for l2 in links:
-            if l1 is not l2 and l1 == l2 and l2 not in duplicate_links:
-                print(f'\nWARNING\n \
-                    link {l1.from_city}-{l1.to_city} is duplicate \
-                    \nthe 1st duplicate link will be removed but you should check Links sheet input')
-                duplicate_links.append(l1)
-    #if duplicate_links != []:
-        #time.sleep(3)
-    for l in duplicate_links:
-        links.remove(l)
-
-    try :
-        test_nodes = [n for n in nodes_by_city if not n in links_by_city]
-        test_links = [n for n in links_by_city if not n in nodes_by_city]
-        test_eqpts = [n for n in eqpts_by_city if not n in nodes_by_city]
-        assert (test_nodes == [] or test_nodes == [''])\
-                and (test_links == [] or test_links ==[''])\
-                and (test_eqpts == [] or test_eqpts ==[''])
-    except AssertionError:
-        print(f'CRITICAL error: \nNames in Nodes and Links sheets do no match, check:\
-            \n{test_nodes} in Nodes sheet\
-            \n{test_links} in Links sheet\
-            \n{test_eqpts} in Eqpt sheet')
-        exit(1)
-
-    for city,link in links_by_city.items():
-        if nodes_by_city[city].node_type.lower()=='ila' and len(link) != 2:
-            #wrong input: ILA sites can only be Degree 2
-            # => correct to make it a ROADM and remove entry in links_by_city
-            #TODO : put in log rather than print
-            print(f'invalid node type ({nodes_by_city[city].node_type})\
- specified in {city}, replaced by ROADM')
-            nodes_by_city[city].node_type = 'ROADM'
-            for n in nodes:
-                if n.city==city:
-                    n.node_type='ROADM'
-    return nodes, links
-
-def convert_file(input_filename, names_matching=False, filter_region=[]):
-    nodes, links, eqpts = parse_excel(input_filename)
-    if filter_region:
-        nodes = [n for n in nodes if n.region.lower() in filter_region]
-        cities = {n.city for n in nodes}
-        links = [lnk for lnk in links if lnk.from_city in cities and
-                                         lnk.to_city in cities]
-        cities = {lnk.from_city for lnk in links} | {lnk.to_city for lnk in links}
-        nodes = [n for n in nodes if n.city in cities]
-
-    global nodes_by_city
-    nodes_by_city = {n.city: n for n in nodes}
-    #create matching dictionary for node name mismatch analysis
-
-    cities = {''.join(c.strip() for c in n.city.split('C+L')).lower(): n.city for n in nodes}
-    cities_to_match = [k for k in cities]
-    city_match_dic = defaultdict(list)
-    for city in cities:
-        if city in cities_to_match:
-            cities_to_match.remove(city)
-        matches = get_close_matches(city, cities_to_match, 4, 0.85)
-        for m in matches:
-            city_match_dic[cities[city]].append(cities[m])
-    #check lower case/upper case
-    for city in nodes_by_city:
-        for match_city in nodes_by_city:
-            if match_city.lower() == city.lower() and match_city != city:
-                city_match_dic[city].append(match_city)
-
-    if names_matching:
-        print('\ncity match dictionary:',city_match_dic)
-    with  open('name_match_dictionary.json', 'w', encoding='utf-8') as city_match_dic_file:
-        city_match_dic_file.write(dumps(city_match_dic, indent=2, ensure_ascii=False))
-
-    global links_by_city
-    links_by_city = defaultdict(list)
-    for link in links:
-        links_by_city[link.from_city].append(link)
-        links_by_city[link.to_city].append(link)
-
-    global eqpts_by_city
-    eqpts_by_city = defaultdict(list)
-    for eqpt in eqpts:
-        eqpts_by_city[eqpt.from_city].append(eqpt)
-
-    nodes, links = sanity_check(nodes, links, nodes_by_city, links_by_city, eqpts_by_city)
-
-    data = {
-        'elements':
-            [{'uid': f'trx {x.city}',
-              'metadata': {'location': {'city':      x.city,
-                                        'region':    x.region,
-                                        'latitude':  x.latitude,
-                                        'longitude': x.longitude}},
-              'type': 'Transceiver'}
-             for x in nodes_by_city.values() if x.node_type.lower() == 'roadm'] +
-            [{'uid': f'roadm {x.city}',
-              'metadata': {'location': {'city':      x.city,
-                                        'region':    x.region,
-                                        'latitude':  x.latitude,
-                                        'longitude': x.longitude}},
-              'type': 'Roadm'}
-             for x in nodes_by_city.values() if x.node_type.lower() == 'roadm' \
-                 and x.booster_restriction == '' and x.preamp_restriction == ''] +
-            [{'uid': f'roadm {x.city}',
-              'params' : {
-                'restrictions': {
-                  'preamp_variety_list': silent_remove(x.preamp_restriction.split(' | '),''),
-                  'booster_variety_list': silent_remove(x.booster_restriction.split(' | '),'')
-                  }
-              },
-              'metadata': {'location': {'city':      x.city,
-                                        'region':    x.region,
-                                        'latitude':  x.latitude,
-                                        'longitude': x.longitude}},
-              'type': 'Roadm'}
-             for x in nodes_by_city.values() if x.node_type.lower() == 'roadm' and \
-                 (x.booster_restriction != '' or x.preamp_restriction != '')] +
-            [{'uid': f'west fused spans in {x.city}',
-              'metadata': {'location': {'city':      x.city,
-                                        'region':    x.region,
-                                        'latitude':  x.latitude,
-                                        'longitude': x.longitude}},
-              'type': 'Fused'}
-             for x in nodes_by_city.values() if x.node_type.lower() == 'fused'] +
-            [{'uid': f'east fused spans in {x.city}',
-              'metadata': {'location': {'city':      x.city,
-                                        'region':    x.region,
-                                        'latitude':  x.latitude,
-                                        'longitude': x.longitude}},
-              'type': 'Fused'}
-             for x in nodes_by_city.values() if x.node_type.lower() == 'fused'] +
-            [{'uid': f'fiber ({x.from_city} \u2192 {x.to_city})-{x.east_cable}',
-              'metadata': {'location': midpoint(nodes_by_city[x.from_city],
-                                                nodes_by_city[x.to_city])},
-              'type': 'Fiber',
-              'type_variety': x.east_fiber,
-              'params': {'length':   round(x.east_distance, 3),
-                         'length_units':    x.distance_units,
-                         'loss_coef': x.east_lineic,
-                         'con_in':x.east_con_in,
-                         'con_out':x.east_con_out}
-            }
-              for x in links] +
-            [{'uid': f'fiber ({x.to_city} \u2192 {x.from_city})-{x.west_cable}',
-              'metadata': {'location': midpoint(nodes_by_city[x.from_city],
-                                                nodes_by_city[x.to_city])},
-              'type': 'Fiber',
-              'type_variety': x.west_fiber,
-              'params': {'length':   round(x.west_distance, 3),
-                         'length_units':    x.distance_units,
-                         'loss_coef': x.west_lineic,
-                         'con_in':x.west_con_in,
-                         'con_out':x.west_con_out}
-            } # missing ILA construction
-              for x in links] +
-            [{'uid': f'east edfa in {e.from_city} to {e.to_city}',
-              'metadata': {'location': {'city':      nodes_by_city[e.from_city].city,
-                                        'region':    nodes_by_city[e.from_city].region,
-                                        'latitude':  nodes_by_city[e.from_city].latitude,
-                                        'longitude': nodes_by_city[e.from_city].longitude}},
-              'type': 'Edfa',
-              'type_variety': e.east_amp_type,
-              'operational': {'gain_target': e.east_amp_gain,
-                              'delta_p':     e.east_amp_dp,
-                              'tilt_target': e.east_tilt,
-                              'out_voa'    : e.east_att_out}
-             }
-             for e in eqpts if (e.east_amp_type.lower() != '' and \
-                                e.east_amp_type.lower() != 'fused')] +
-            [{'uid': f'west edfa in {e.from_city} to {e.to_city}',
-              'metadata': {'location': {'city':      nodes_by_city[e.from_city].city,
-                                        'region':    nodes_by_city[e.from_city].region,
-                                        'latitude':  nodes_by_city[e.from_city].latitude,
-                                        'longitude': nodes_by_city[e.from_city].longitude}},
-              'type': 'Edfa',
-              'type_variety': e.west_amp_type,
-              'operational': {'gain_target': e.west_amp_gain,
-                              'delta_p':     e.west_amp_dp,
-                              'tilt_target': e.west_tilt,
-                              'out_voa'    : e.west_att_out}
-             }
-             for e in eqpts if (e.west_amp_type.lower() != '' and \
-                                e.west_amp_type.lower() != 'fused')] +
-            # fused edfa variety is a hack to indicate that there should not be
-            # booster amplifier out the roadm.
-            # If user specifies ILA in Nodes sheet and fused in Eqpt sheet, then assumes that
-            # this is a fused nodes.
-            [{'uid': f'east edfa in {e.from_city} to {e.to_city}',
-              'metadata': {'location': {'city':      nodes_by_city[e.from_city].city,
-                                        'region':    nodes_by_city[e.from_city].region,
-                                        'latitude':  nodes_by_city[e.from_city].latitude,
-                                        'longitude': nodes_by_city[e.from_city].longitude}},
-              'type': 'Fused',
-              'params': {'loss': 0}
-             }
-             for e in eqpts if e.east_amp_type.lower() == 'fused'] +
-            [{'uid': f'west edfa in {e.from_city} to {e.to_city}',
-              'metadata': {'location': {'city':      nodes_by_city[e.from_city].city,
-                                        'region':    nodes_by_city[e.from_city].region,
-                                        'latitude':  nodes_by_city[e.from_city].latitude,
-                                        'longitude': nodes_by_city[e.from_city].longitude}},
-              'type': 'Fused',
-              'params': {'loss': 0}
-             }
-             for e in eqpts if e.west_amp_type.lower() == 'fused'],
-        'connections':
-            list(chain.from_iterable([eqpt_connection_by_city(n.city)
-            for n in nodes]))
-            +
-            list(chain.from_iterable(zip(
-            [{'from_node': f'trx {x.city}',
-              'to_node':   f'roadm {x.city}'}
-             for x in nodes_by_city.values() if x.node_type.lower()=='roadm'],
-            [{'from_node': f'roadm {x.city}',
-              'to_node':   f'trx {x.city}'}
-             for x in nodes_by_city.values() if x.node_type.lower()=='roadm'])))
-    }
-
-    suffix_filename = str(input_filename.suffixes[0])
-    full_input_filename = str(input_filename)
-    split_filename = [full_input_filename[0:len(full_input_filename)-len(suffix_filename)] , suffix_filename[1:]]
-    output_json_file_name = split_filename[0]+'.json'
-    with  open(output_json_file_name, 'w', encoding='utf-8') as edfa_json_file:
-        edfa_json_file.write(dumps(data, indent=2, ensure_ascii=False))
-    return output_json_file_name
-
-def parse_excel(input_filename):
-    link_headers = \
-    {  'Node A': 'from_city',
-       'Node Z': 'to_city',
-       'east':{
-            'Distance (km)':        'east_distance',
-            'Fiber type':           'east_fiber',
-            'lineic att':           'east_lineic',
-            'Con_in':               'east_con_in',
-            'Con_out':              'east_con_out',
-            'PMD':                  'east_pmd',
-            'Cable id':             'east_cable'
-        },
-        'west':{
-            'Distance (km)':        'west_distance',
-            'Fiber type':           'west_fiber',
-            'lineic att':           'west_lineic',
-            'Con_in':               'west_con_in',
-            'Con_out':              'west_con_out',
-            'PMD':                  'west_pmd',
-            'Cable id':             'west_cable'
-        }
-    }
-    node_headers = \
-    {   'City':         'city',
-        'State':        'state',
-        'Country':      'country',
-        'Region':       'region',
-        'Latitude':     'latitude',
-        'Longitude':    'longitude',
-        'Type':         'node_type',
-        'Booster_restriction': 'booster_restriction',
-        'Preamp_restriction': 'preamp_restriction'
-    }
-    eqpt_headers = \
-    {  'Node A': 'from_city',
-       'Node Z': 'to_city',
-       'east':{
-            'amp type':         'east_amp_type',
-            'att_in':           'east_att_in',
-            'amp gain':         'east_amp_gain',
-            'delta p':          'east_amp_dp',
-            'tilt':             'east_tilt',
-            'att_out':          'east_att_out'
-       },
-       'west':{
-            'amp type':         'west_amp_type',
-            'att_in':           'west_att_in',
-            'amp gain':         'west_amp_gain',
-            'delta p':          'west_amp_dp',
-            'tilt':             'west_tilt',
-            'att_out':          'west_att_out'
-       }
-    }
-
-    with open_workbook(input_filename) as wb:
-        nodes_sheet = wb.sheet_by_name('Nodes')
-        links_sheet = wb.sheet_by_name('Links')
-        try:
-            eqpt_sheet = wb.sheet_by_name('Eqpt')
-        except Exception:
-            #eqpt_sheet is optional
-            eqpt_sheet = None
-
-        nodes = []
-        for node in parse_sheet(nodes_sheet, node_headers, NODES_LINE, NODES_LINE+1, NODES_COLUMN):
-            nodes.append(Node(**node))
-        expected_node_types = {'ROADM', 'ILA', 'FUSED'}
-        for n in nodes:
-            if n.node_type not in expected_node_types:
-                n.node_type = 'ILA'
-
-        links = []
-        for link in parse_sheet(links_sheet, link_headers, LINKS_LINE, LINKS_LINE+2, LINKS_COLUMN):
-            links.append(Link(**link))
-        #print('\n', [l.__dict__ for l in links])
-
-        eqpts = []
-        if eqpt_sheet != None:
-            for eqpt in parse_sheet(eqpt_sheet, eqpt_headers, EQPTS_LINE, EQPTS_LINE+2, EQPTS_COLUMN):
-                eqpts.append(Eqpt(**eqpt))
-
-    # sanity check
-    all_cities = Counter(n.city for n in nodes)
-    if len(all_cities) != len(nodes):
-        raise ValueError(f'Duplicate city: {all_cities}')
-    bad_links = []
-    for lnk in links:
-        if lnk.from_city not in all_cities or lnk.to_city not in all_cities:
-            bad_links.append([lnk.from_city, lnk.to_city])
-    if bad_links:
-        raise NetworkTopologyError(f'Bad link(s): {bad_links}.')
-
-    return nodes, links, eqpts
-
-
-def eqpt_connection_by_city(city_name):
-    other_cities = fiber_dest_from_source(city_name)
-    subdata = []
-    if nodes_by_city[city_name].node_type.lower() in {'ila', 'fused'}:
-        # Then len(other_cities) == 2
-        direction = ['west', 'east']
-        for i in range(2):
-            from_ = fiber_link(other_cities[i], city_name)
-            in_ = eqpt_in_city_to_city(city_name, other_cities[0],direction[i])
-            to_ = fiber_link(city_name, other_cities[1-i])
-            subdata += connect_eqpt(from_, in_, to_)
-    elif nodes_by_city[city_name].node_type.lower() == 'roadm':
-        for other_city in other_cities:
-            from_ = f'roadm {city_name}'
-            in_ = eqpt_in_city_to_city(city_name, other_city)
-            to_ = fiber_link(city_name, other_city)
-            subdata += connect_eqpt(from_, in_, to_)
-
-            from_ = fiber_link(other_city, city_name)
-            in_ = eqpt_in_city_to_city(city_name, other_city, "west")
-            to_ = f'roadm {city_name}'
-            subdata += connect_eqpt(from_, in_, to_)
-    return subdata
-
-
-def connect_eqpt(from_, in_, to_):
-    connections = []
-    if in_ !='':
-        connections = [{'from_node': from_, 'to_node': in_},
-                      {'from_node': in_, 'to_node': to_}]
-    else:
-        connections = [{'from_node': from_, 'to_node': to_}]
-    return connections
-
-
-def eqpt_in_city_to_city(in_city, to_city, direction='east'):
-    rev_direction = 'west' if direction == 'east' else 'east'
-    amp_direction = f'{direction}_amp_type'
-    amp_rev_direction = f'{rev_direction}_amp_type'
-    return_eqpt = ''
-    if in_city in eqpts_by_city:
-        for e in eqpts_by_city[in_city]:
-            if nodes_by_city[in_city].node_type.lower() == 'roadm':
-                if e.to_city == to_city and getattr(e, amp_direction) != '':
-                    return_eqpt = f'{direction} edfa in {e.from_city} to {e.to_city}'
-            elif nodes_by_city[in_city].node_type.lower() == 'ila':
-                if e.to_city != to_city:
-                    direction = rev_direction
-                    amp_direction = amp_rev_direction
-                if getattr(e, amp_direction) != '':
-                    return_eqpt = f'{direction} edfa in {e.from_city} to {e.to_city}'
-    if nodes_by_city[in_city].node_type.lower() == 'fused':
-        return_eqpt = f'{direction} fused spans in {in_city}'
-    return return_eqpt
-
-
-def fiber_dest_from_source(city_name):
-    destinations = []
-    links_from_city = links_by_city[city_name]
-    for l in links_from_city:
-        if l.from_city == city_name:
-            destinations.append(l.to_city)
-        else:
-            destinations.append(l.from_city)
-    return destinations
-
-
-def fiber_link(from_city, to_city):
-    source_dest = (from_city, to_city)
-    link = links_by_city[from_city]
-    l = next(l for l in link if l.from_city in source_dest and l.to_city in source_dest)
-    if l.from_city == from_city:
-        fiber = f'fiber ({l.from_city} \u2192 {l.to_city})-{l.east_cable}'
-    else:
-        fiber = f'fiber ({l.to_city} \u2192 {l.from_city})-{l.west_cable}'
-    return fiber
-
-
-def midpoint(city_a, city_b):
-    lats  = city_a.latitude, city_b.latitude
-    longs = city_a.longitude, city_b.longitude
-    try:
-        result = {
-        'latitude':  sum(lats)  / 2,
-        'longitude': sum(longs) / 2
-                }
-    except :
-        result = {
-        'latitude':  0,
-        'longitude': 0
-                }
-    return result
-
-#output_json_file_name = 'coronet_conus_example.json'
-#TODO get column size automatically from tupple size
-
-NODES_COLUMN = 10
-NODES_LINE = 4
-LINKS_COLUMN = 16
-LINKS_LINE = 3
-EQPTS_LINE = 3
-EQPTS_COLUMN = 14
-parser = ArgumentParser()
-parser.add_argument('workbook', nargs='?', type=Path , default='meshTopologyExampleV2.xls')
-parser.add_argument('-f', '--filter-region', action='append', default=[])
-
-if __name__ == '__main__':
-    args = parser.parse_args()
-    convert_file(args.workbook, args.filter_region)

gnpy/core/equipment.py

@@ -8,261 +8,9 @@ gnpy.core.equipment
 This module contains functionality for specifying equipment.
 '''
 
-from numpy import clip, polyval
+from gnpy.core.utils import automatic_nch, db2lin
-from operator import itemgetter
-from math import isclose
-from pathlib import Path
-from json import load
-from gnpy.core.utils import lin2db, db2lin, load_json
-from collections import namedtuple
-from gnpy.core.elements import Edfa
 from gnpy.core.exceptions import EquipmentConfigError
-import time
 
-Model_vg = namedtuple('Model_vg', 'nf1 nf2 delta_p')
-Model_fg = namedtuple('Model_fg', 'nf0')
-Model_openroadm = namedtuple('Model_openroadm', 'nf_coef')
-Model_hybrid = namedtuple('Model_hybrid', 'nf_ram gain_ram edfa_variety')
-Model_dual_stage = namedtuple('Model_dual_stage', 'preamp_variety booster_variety')
-
-class common:
-    def update_attr(self, default_values, kwargs, name):
-        clean_kwargs = {k:v for k, v in kwargs.items() if v != ''}
-        for k, v in default_values.items():
-            setattr(self, k, clean_kwargs.get(k, v))
-            if k not in clean_kwargs and name != 'Amp':
-                print(f'\x1b[1;31;40m'+
-                      f'\n WARNING missing {k} attribute in eqpt_config.json[{name}]'+
-                      f'\n default value is {k} = {v}'+
-                      f'\x1b[0m')
-                time.sleep(1)
-
-class SI(common):
-    default_values =\
-    {
-        "f_min":            191.35e12,
-        "f_max":            196.1e12,
-        "baud_rate":        32e9,
-        "spacing":          50e9,
-        "power_dbm":        0,
-        "power_range_db":   [0, 0, 0.5],
-        "roll_off":         0.15,
-        "tx_osnr":          45,
-        "sys_margins":      0
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'SI')
-
-class Span(common):
-    default_values = \
-    {
-        'power_mode':                       True,
-        'delta_power_range_db':             None,
-        'max_fiber_lineic_loss_for_raman':  0.25,
-        'target_extended_gain':             2.5,
-        'max_length':                       150,
-        'length_units':                     'km',
-        'max_loss':                         None,
-        'padding':                          10,
-        'EOL':                              0,
-        'con_in':                           0,
-        'con_out':                          0
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'Span')
-
-class Roadm(common):
-    default_values = \
-    {
-        'target_pch_out_db':   -17,
-        'add_drop_osnr':       100,
-        'restrictions': {
-            'preamp_variety_list':[],
-            'booster_variety_list':[]
-            }
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'Roadm')
-
-class Transceiver(common):
-    default_values = \
-    {
-        'type_variety': None,
-        'frequency':    None,
-        'mode':         {}
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'Transceiver')
-
-class Fiber(common):
-    default_values = \
-    {
-        'type_variety':  '',
-        'dispersion':    None,
-        'gamma':         0
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'Fiber')
-
-class RamanFiber(common):
-    default_values = \
-    {
-        'type_variety':  '',
-        'dispersion':    None,
-        'gamma':         0,
-        'raman_efficiency': None
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'RamanFiber')
-        for param in ('cr', 'frequency_offset'):
-            if param not in self.raman_efficiency:
-                raise EquipmentConfigError(f'RamanFiber.raman_efficiency: missing "{param}" parameter')
-        if self.raman_efficiency['frequency_offset'] != sorted(self.raman_efficiency['frequency_offset']):
-            raise EquipmentConfigError(f'RamanFiber.raman_efficiency.frequency_offset is not sorted')
-
-class Amp(common):
-    default_values = \
-    {
-        'f_min':                191.35e12,
-        'f_max':                196.1e12,
-        'type_variety':         '',
-        'type_def':             '',
-        'gain_flatmax':         None,
-        'gain_min':             None,
-        'p_max':                None,
-        'nf_model':             None,
-        'dual_stage_model':     None,
-        'nf_fit_coeff':         None,
-        'nf_ripple':            None,
-        'dgt':                  None,
-        'gain_ripple':          None,
-        'out_voa_auto':         False,
-        'allowed_for_design':   False,
-        'raman':                False
-    }
-
-    def __init__(self, **kwargs):
-        self.update_attr(self.default_values, kwargs, 'Amp')
-
-    @classmethod
-    def from_json(cls, filename, **kwargs):
-        config = Path(filename).parent / 'default_edfa_config.json'
-
-        type_variety = kwargs['type_variety']
-        type_def = kwargs.get('type_def', 'variable_gain') # default compatibility with older json eqpt files
-        nf_def = None
-        dual_stage_def = None
-
-        if type_def == 'fixed_gain':
-            try:
-                nf0 = kwargs.pop('nf0')
-            except KeyError: #nf0 is expected for a fixed gain amp
-                raise EquipmentConfigError(f'missing nf0 value input for amplifier: {type_variety} in equipment config')
-            for k in ('nf_min', 'nf_max'):
-                try:
-                    del kwargs[k]
-                except KeyError:
-                    pass
-            nf_def = Model_fg(nf0)
-        elif type_def == 'advanced_model':
-            config = Path(filename).parent / kwargs.pop('advanced_config_from_json')
-        elif type_def == 'variable_gain':
-            gain_min, gain_max = kwargs['gain_min'], kwargs['gain_flatmax']
-            try: #nf_min and nf_max are expected for a variable gain amp
-                nf_min = kwargs.pop('nf_min')
-                nf_max = kwargs.pop('nf_max')
-            except KeyError:
-                raise EquipmentConfigError(f'missing nf_min or nf_max value input for amplifier: {type_variety} in equipment config')
-            try: #remove all remaining nf inputs
-                del kwargs['nf0']
-            except KeyError: pass #nf0 is not needed for variable gain amp
-            nf1, nf2, delta_p = nf_model(type_variety, gain_min, gain_max, nf_min, nf_max)
-            nf_def = Model_vg(nf1, nf2, delta_p)
-        elif type_def == 'openroadm':
-            try:
-                nf_coef = kwargs.pop('nf_coef')
-            except KeyError: #nf_coef is expected for openroadm amp
-                raise EquipmentConfigError(f'missing nf_coef input for amplifier: {type_variety} in equipment config')
-            nf_def = Model_openroadm(nf_coef)
-        elif type_def == 'dual_stage':
-            try: #nf_ram and gain_ram are expected for a hybrid amp
-                preamp_variety = kwargs.pop('preamp_variety')
-                booster_variety = kwargs.pop('booster_variety')
-            except KeyError:
-                raise EquipmentConfigError(f'missing preamp/booster variety input for amplifier: {type_variety} in equipment config')
-            dual_stage_def = Model_dual_stage(preamp_variety, booster_variety)
-
-        with open(config, encoding='utf-8') as f:
-            json_data = load(f)
-
-        return cls(**{**kwargs, **json_data,
-            'nf_model': nf_def, 'dual_stage_model': dual_stage_def})
-
-
-def nf_model(type_variety, gain_min, gain_max, nf_min, nf_max):
-    if nf_min < -10:
-        raise EquipmentConfigError(f'Invalid nf_min value {nf_min!r} for amplifier {type_variety}')
-    if nf_max < -10:
-        raise EquipmentConfigError(f'Invalid nf_max value {nf_max!r} for amplifier {type_variety}')
-
-    # NF estimation model based on nf_min and nf_max
-    # delta_p:  max power dB difference between first and second stage coils
-    # dB g1a:   first stage gain - internal VOA attenuation
-    # nf1, nf2: first and second stage coils
-    #           calculated by solving nf_{min,max} = nf1 + nf2 / g1a{min,max}
-    delta_p = 5
-    g1a_min = gain_min - (gain_max - gain_min) - delta_p
-    g1a_max = gain_max - delta_p
-    nf2 = lin2db((db2lin(nf_min) - db2lin(nf_max)) /
-                 (1/db2lin(g1a_max) - 1/db2lin(g1a_min)))
-    nf1 = lin2db(db2lin(nf_min) - db2lin(nf2)/db2lin(g1a_max))
-
-    if nf1 < 4:
-        raise EquipmentConfigError(f'First coil value too low {nf1} for amplifier {type_variety}')
-
-    # Check 1 dB < delta_p < 6 dB to ensure nf_min and nf_max values make sense.
-    # There shouldn't be high nf differences between the two coils:
-    #    nf2 should be nf1 + 0.3 < nf2 < nf1 + 2
-    # If not, recompute and check delta_p
-    if not nf1 + 0.3 < nf2 < nf1 + 2:
-        nf2 = clip(nf2, nf1 + 0.3, nf1 + 2)
-        g1a_max = lin2db(db2lin(nf2) / (db2lin(nf_min) - db2lin(nf1)))
-        delta_p = gain_max - g1a_max
-        g1a_min = gain_min - (gain_max-gain_min) - delta_p
-        if not 1 < delta_p < 11:
-            raise EquipmentConfigError(f'Computed \N{greek capital letter delta}P invalid \
-                \n 1st coil vs 2nd coil calculated DeltaP {delta_p:.2f} for \
-                \n amplifier {type_variety} is not valid: revise inputs \
-                \n calculated 1st coil NF = {nf1:.2f}, 2nd coil NF = {nf2:.2f}')
-    # Check calculated values for nf1 and nf2
-    calc_nf_min = lin2db(db2lin(nf1) + db2lin(nf2)/db2lin(g1a_max))
-    if not isclose(nf_min, calc_nf_min, abs_tol=0.01):
-        raise EquipmentConfigError(f'nf_min does not match calc_nf_min, {nf_min} vs {calc_nf_min} for amp {type_variety}')
-    calc_nf_max = lin2db(db2lin(nf1) + db2lin(nf2)/db2lin(g1a_min))
-    if not isclose(nf_max, calc_nf_max, abs_tol=0.01):
-        raise EquipmentConfigError(f'nf_max does not match calc_nf_max, {nf_max} vs {calc_nf_max} for amp {type_variety}')
-
-    return nf1, nf2, delta_p
-
-def edfa_nf(gain_target, variety_type, equipment):
-    amp_params = equipment['Edfa'][variety_type]
-    amp = Edfa(
-            uid = f'calc_NF',
-            params = amp_params.__dict__,
-            operational = {
-                'gain_target': gain_target,
-                'tilt_target': 0
-                        }
-            )
-    amp.pin_db = 0
-    amp.nch = 88
-    return amp._calc_nf(True)
 
 def trx_mode_params(equipment, trx_type_variety='', trx_mode='', error_message=False):
     """return the trx and SI parameters from eqpt_config for a given type_variety and mode (ie format)"""
@@ -271,38 +19,38 @@ def trx_mode_params(equipment, trx_type_variety='', trx_mode='', error_message=F
 
     try:
         trxs = equipment['Transceiver']
-        #if called from path_requests_run.py, trx_mode is filled with None when not specified by user
+        # if called from path_requests_run.py, trx_mode is filled with None when not specified by user
-        #if called from transmission_main.py, trx_mode is ''
+        # if called from transmission_main.py, trx_mode is ''
         if trx_mode is not None:
-            mode_params = next(mode for trx in trxs \
+            mode_params = next(mode for trx in trxs
-                        if trx == trx_type_variety \
+                               if trx == trx_type_variety
-                        for mode in trxs[trx].mode \
+                               for mode in trxs[trx].mode
-                        if mode['format'] == trx_mode)
+                               if mode['format'] == trx_mode)
             trx_params = {**mode_params}
             # sanity check: spacing baudrate must be smaller than min spacing
-            if trx_params['baud_rate'] > trx_params['min_spacing'] :
+            if trx_params['baud_rate'] > trx_params['min_spacing']:
-                raise EquipmentConfigError(f'Inconsistency in equipment library:\n Transpoder "{trx_type_variety}" mode "{trx_params["format"]}" '+\
+                raise EquipmentConfigError(f'Inconsistency in equipment library:\n Transpoder "{trx_type_variety}" mode "{trx_params["format"]}" ' +
-                    f'has baud rate: {trx_params["baud_rate"]*1e-9} GHz greater than min_spacing {trx_params["min_spacing"]*1e-9}.')
+                                           f'has baud rate {trx_params["baud_rate"]*1e-9} GHz greater than min_spacing {trx_params["min_spacing"]*1e-9}.')
         else:
             mode_params = {"format": "undetermined",
                            "baud_rate": None,
                            "OSNR": None,
                            "bit_rate": None,
                            "roll_off": None,
-                           "tx_osnr":None,
+                           "tx_osnr": None,
-                           "min_spacing":None,
+                           "min_spacing": None,
-                           "cost":None}
+                           "cost": None}
             trx_params = {**mode_params}
         trx_params['f_min'] = equipment['Transceiver'][trx_type_variety].frequency['min']
         trx_params['f_max'] = equipment['Transceiver'][trx_type_variety].frequency['max']
 
         # TODO: novel automatic feature maybe unwanted if spacing is specified
-        # trx_params['spacing'] = automatic_spacing(trx_params['baud_rate'])
+        # trx_params['spacing'] = _automatic_spacing(trx_params['baud_rate'])
         # temp = trx_params['spacing']
         # print(f'spacing {temp}')
-    except StopIteration :
+    except StopIteration:
         if error_message:
-            raise EquipmentConfigError(f'Computation stoped: could not find tsp : {trx_type_variety} with mode: {trx_mode} in eqpt library')
+            raise EquipmentConfigError(f'Could not find transponder "{trx_type_variety}" with mode "{trx_mode}" in equipment library')
         else:
             # default transponder charcteristics
             # mainly used with transmission_main_example.py
@@ -320,82 +68,6 @@ def trx_mode_params(equipment, trx_type_variety='', trx_mode='', error_message=F
             trx_params['nb_channel'] = nch
             print(f'There are {nch} channels propagating')
 
-    trx_params['power'] =  db2lin(default_si_data.power_dbm)*1e-3
+    trx_params['power'] = db2lin(default_si_data.power_dbm) * 1e-3
 
     return trx_params
-
-def automatic_spacing(baud_rate):
-    """return the min possible channel spacing for a given baud rate"""
-    # TODO : this should parametrized in a cfg file
-    # list of possible tuples [(max_baud_rate, spacing_for_this_baud_rate)]
-    spacing_list = [(33e9, 37.5e9), (38e9, 50e9), (50e9, 62.5e9), (67e9, 75e9), (92e9, 100e9)]
-    return min((s[1] for s in spacing_list if s[0] > baud_rate), default=baud_rate*1.2)
-
-def automatic_nch(f_min, f_max, spacing):
-    return int((f_max - f_min)//spacing)
-
-def automatic_fmax(f_min, spacing, nch):
-    return f_min + spacing * nch
-
-def load_equipment(filename):
-    json_data = load_json(filename)
-    return equipment_from_json(json_data, filename)
-
-def update_trx_osnr(equipment):
-    """add sys_margins to all Transceivers OSNR values"""
-    for trx in equipment['Transceiver'].values():
-        for m in trx.mode:
-            m['OSNR'] = m['OSNR'] + equipment['SI']['default'].sys_margins
-    return equipment
-
-def update_dual_stage(equipment):
-    edfa_dict = equipment['Edfa']
-    for edfa in edfa_dict.values():
-        if edfa.type_def == 'dual_stage':
-            edfa_preamp = edfa_dict[edfa.dual_stage_model.preamp_variety]
-            edfa_booster = edfa_dict[edfa.dual_stage_model.booster_variety]
-            for key, value in edfa_preamp.__dict__.items():
-                attr_k = 'preamp_' + key
-                setattr(edfa, attr_k, value)
-            for key, value in edfa_booster.__dict__.items():
-                attr_k = 'booster_' + key
-                setattr(edfa, attr_k, value)
-            edfa.p_max = edfa_booster.p_max
-            edfa.gain_flatmax = edfa_booster.gain_flatmax + edfa_preamp.gain_flatmax
-            if edfa.gain_min < edfa_preamp.gain_min:
-                raise EquipmentConfigError(f'Dual stage {edfa.type_variety} min gain is lower than its preamp min gain')
-    return equipment
-
-def roadm_restrictions_sanity_check(equipment):
-    """ verifies that booster and preamp restrictions specified in roadm equipment are listed
-    in the edfa.
-    """
-    restrictions = equipment['Roadm']['default'].restrictions['booster_variety_list'] + \
-        equipment['Roadm']['default'].restrictions['preamp_variety_list']
-    for amp_name in restrictions:
-        if amp_name not in equipment['Edfa']:
-            raise EquipmentConfigError(f'ROADM restriction {amp_name} does not refer to a defined EDFA name')
-
-def equipment_from_json(json_data, filename):
-    """build global dictionnary eqpt_library that stores all eqpt characteristics:
-    edfa type type_variety, fiber type_variety
-    from the eqpt_config.json (filename parameter)
-    also read advanced_config_from_json file parameters for edfa if they are available:
-    typically nf_ripple, dfg gain ripple, dgt and nf polynomial nf_fit_coeff
-    if advanced_config_from_json file parameter is not present: use nf_model:
-    requires nf_min and nf_max values boundaries of the edfa gain range
-    """
-    equipment = {}
-    for key, entries in json_data.items():
-        equipment[key] = {}
-        typ = globals()[key]
-        for entry in entries:
-            subkey = entry.get('type_variety', 'default')
-            if key == 'Edfa':
-                equipment[key][subkey] = Amp.from_json(filename, **entry)
-            else:
-                equipment[key][subkey] = typ(**entry)
-    equipment = update_trx_osnr(equipment)
-    equipment = update_dual_stage(equipment)
-    roadm_restrictions_sanity_check(equipment)
-    return equipment

gnpy/core/exceptions.py

@@ -1,29 +1,37 @@
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 
-'''
+"""
 gnpy.core.exceptions
 ====================
 
 Exceptions thrown by other gnpy modules
-'''
+"""
 
 
 class ConfigurationError(Exception):
-    '''User-provided configuration contains an error'''
+    """User-provided configuration contains an error"""
+
 
 class EquipmentConfigError(ConfigurationError):
-    '''Incomplete or wrong configuration within the equipment library'''
+    """Incomplete or wrong configuration within the equipment library"""
+
 
 class NetworkTopologyError(ConfigurationError):
-    '''Topology of user-provided network is wrong'''
+    """Topology of user-provided network is wrong"""
+
 
 class ServiceError(Exception):
-    '''Service of user-provided request is wrong'''
+    """Service of user-provided request is wrong"""
+
 
 class DisjunctionError(ServiceError):
-    '''Disjunction of user-provided request can not be satisfied'''
+    """Disjunction of user-provided request can not be satisfied"""
+
 
 class SpectrumError(Exception):
-    '''Spectrum errors of the program'''
+    """Spectrum errors of the program"""
 
+
+class ParametersError(ConfigurationError):
+    """Incomplete or wrong configurations within parameters json"""

gnpy/core/execute.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-'''
-gnpy.core.execute
-=================
-
-This module contains functions for executing the propogation of
-spectral information on a `gnpy` network.
-'''

gnpy/core/info.py

@@ -1,27 +1,32 @@
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 
-'''
+"""
 gnpy.core.info
 ==============
 
 This module contains classes for modelling :class:`SpectralInformation`.
-'''
+"""
-
 
 from collections import namedtuple
-from numpy import array
+from gnpy.core.utils import automatic_nch, lin2db
-from gnpy.core.utils import lin2db, db2lin
+
-from json import loads
-from gnpy.core.utils import load_json
-from gnpy.core.equipment import automatic_nch, automatic_spacing
 
 class Power(namedtuple('Power', 'signal nli ase')):
     """carriers power in W"""
 
 
-class Channel(namedtuple('Channel', 'channel_number frequency baud_rate roll_off power')):
+class Channel(namedtuple('Channel', 'channel_number frequency baud_rate roll_off power chromatic_dispersion pmd')):
-    pass
+    """ Class containing the parameters of a WDM signal.
+
+        :param channel_number: channel number in the WDM grid
+        :param frequency: central frequency of the signal (Hz)
+        :param baud_rate: the symbol rate of the signal (Baud)
+        :param roll_off: the roll off of the signal. It is a pure number between 0 and 1
+        :param power (gnpy.core.info.Power): power of signal, ASE noise and NLI (W)
+        :param chromatic_dispersion: chromatic dispersion (s/m)
+        :param pmd: polarization mode dispersion (s)
+    """
 
 
 class Pref(namedtuple('Pref', 'p_span0, p_spani, neq_ch ')):
@@ -44,29 +49,8 @@ def create_input_spectral_information(f_min, f_max, roll_off, baud_rate, power,
     si = SpectralInformation(
         pref=Pref(pref, pref, lin2db(nb_channel)),
         carriers=[
-            Channel(f, (f_min+spacing*f),
+            Channel(f, (f_min + spacing * f),
-            baud_rate, roll_off, Power(power, 0, 0)) for f in range(1,nb_channel+1)
+                    baud_rate, roll_off, Power(power, 0, 0), 0, 0) for f in range(1, nb_channel + 1)
-            ])
+        ]
-    return si
-
-if __name__ == '__main__':
-    pref = lin2db(power * 1e3)
-    si = SpectralInformation(
-        Pref(pref, pref),
-        Channel(1, 193.95e12, 32e9, 0.15,  # 193.95 THz, 32 Gbaud
-            Power(1e-3, 1e-6, 1e-6)),             # 1 mW, 1uW, 1uW
-        Channel(1, 195.95e12, 32e9, 0.15,  # 195.95 THz, 32 Gbaud
-            Power(1.2e-3, 1e-6, 1e-6)),           # 1.2 mW, 1uW, 1uW
     )
-
+    return si
-    si = SpectralInformation()
-    spacing = 0.05 # THz
-
-    si = si._replace(carriers=tuple(Channel(f+1, 191.3+spacing*(f+1), 32e9, 0.15, Power(1e-3, f, 1)) for f in range(96)))
-
-    print(f'si = {si}')
-    print(f'si = {si.carriers[0].power.nli}')
-    print(f'si = {si.carriers[20].power.nli}')
-    si2 = si._replace(carriers=tuple(c._replace(power = c.power._replace(nli = c.power.nli * 1e5))
-                              for c in si.carriers))
-    print(f'si2 = {si2}')

gnpy/core/network.py

@@ -5,92 +5,30 @@
 gnpy.core.network
 =================
 
-This module contains functions for constructing networks of network elements.
+Working with networks which consist of network elements
 '''
 
-from gnpy.core.convert import convert_file
+from operator import attrgetter
-from networkx import DiGraph
+from gnpy.core import ansi_escapes, elements
-from numpy import arange
-from scipy.interpolate import interp1d
-from logging import getLogger
-from os import path
-from operator import itemgetter, attrgetter
-from gnpy.core import elements
-from gnpy.core.elements import Fiber, Edfa, Transceiver, Roadm, Fused, RamanFiber
-from gnpy.core.equipment import edfa_nf
 from gnpy.core.exceptions import ConfigurationError, NetworkTopologyError
-from gnpy.core.units import UNITS
+from gnpy.core.utils import round2float, convert_length
-from gnpy.core.utils import (load_json, save_json, round2float, db2lin,
-                            merge_amplifier_restrictions)
-from gnpy.core.science_utils import SimParams
 from collections import namedtuple
 
-logger = getLogger(__name__)
 
-def load_network(filename, equipment, name_matching = False):
+def edfa_nf(gain_target, variety_type, equipment):
-    json_filename = ''
+    amp_params = equipment['Edfa'][variety_type]
-    if filename.suffix.lower() == '.xls':
+    amp = elements.Edfa(
-        logger.info('Automatically generating topology JSON file')
+        uid='calc_NF',
-        json_filename = convert_file(filename, name_matching)
+        params=amp_params.__dict__,
-    elif filename.suffix.lower() == '.json':
+        operational={
-        json_filename = filename
+            'gain_target': gain_target,
-    else:
+            'tilt_target': 0
-        raise ValueError(f'unsuported topology filename extension {filename.suffix.lower()}')
-    json_data = load_json(json_filename)
-    return network_from_json(json_data, equipment)
-
-def save_network(filename, network):
-    filename_output = path.splitext(filename)[0] + '_auto_design.json'
-    json_data = network_to_json(network)
-    save_json(json_data, filename_output)
-
-def network_from_json(json_data, equipment):
-    # NOTE|dutc: we could use the following, but it would tie our data format
-    #            too closely to the graph library
-    # from networkx import node_link_graph
-    g = DiGraph()
-    for el_config in json_data['elements']:
-        typ = el_config.pop('type')
-        variety = el_config.pop('type_variety', 'default')
-        if typ in equipment and variety in equipment[typ]:
-            extra_params = equipment[typ][variety]
-            temp = el_config.setdefault('params', {})
-            temp = merge_amplifier_restrictions(temp, extra_params.__dict__)
-            el_config['params'] = temp
-        elif typ in ['Edfa', 'Fiber']: # catch it now because the code will crash later!
-            raise ConfigurationError(f'The {typ} of variety type {variety} was not recognized:'
-                    '\nplease check it is properly defined in the eqpt_config json file')
-        cls = getattr(elements, typ)
-        el = cls(**el_config)
-        g.add_node(el)
-
-    nodes = {k.uid: k for k in g.nodes()}
-
-    for cx in json_data['connections']:
-        from_node, to_node = cx['from_node'], cx['to_node']
-        try:
-            if isinstance(nodes[from_node], Fiber):
-                edge_length = nodes[from_node].params.length
-            else:
-                edge_length = 0.01
-            g.add_edge(nodes[from_node], nodes[to_node], weight = edge_length)
-        except KeyError:
-            raise NetworkTopologyError(f'can not find {from_node} or {to_node} defined in {cx}')
-
-    return g
-
-def network_to_json(network):
-    data = {
-        'elements': [n.to_json for n in network]
         }
-    connections = {
+    )
-        'connections': [{"from_node": n.uid,
+    amp.pin_db = 0
-                         "to_node": next_n.uid}
+    amp.nch = 88
-                        for n in network
+    return amp._calc_nf(True)
-                        for next_n in network.successors(n) if next_n is not None]
+
-        }
-    data.update(connections)
-    return data
 
 def select_edfa(raman_allowed, gain_target, power_target, equipment, uid, restrictions=None):
     """amplifer selection algorithm
@@ -103,7 +41,7 @@ def select_edfa(raman_allowed, gain_target, power_target, equipment, uid, restri
     # because main use case is to have specific radm amp which are not allowed for ILA
     # with the auto design
     edfa_dict = {name: amp for (name, amp) in equipment['Edfa'].items()
-        if restrictions is None or name in restrictions}
+                 if restrictions is None or name in restrictions}
 
     pin = power_target - gain_target
 
@@ -114,51 +52,49 @@ def select_edfa(raman_allowed, gain_target, power_target, equipment, uid, restri
     # extended gain max allowance TARGET_EXTENDED_GAIN is coming from eqpt_config.json
     # power attribut include power AND gain limitations
     edfa_list = [Edfa_list(
-                variety=edfa_variety,
+        variety=edfa_variety,
-                power=min(
+        power=min(
-                    pin
+            pin
-                    +edfa.gain_flatmax
+            + edfa.gain_flatmax
-                    +TARGET_EXTENDED_GAIN,
+            + TARGET_EXTENDED_GAIN,
-                    edfa.p_max
+            edfa.p_max
-                    )
+        )
-                    -power_target,
+        - power_target,
-                gain_min=
+        gain_min=gain_target + 3
-                    gain_target+3
+        - edfa.gain_min,
-                    -edfa.gain_min,
+        nf=edfa_nf(gain_target, edfa_variety, equipment))
-                nf=edfa_nf(gain_target, edfa_variety, equipment)) \
+        for edfa_variety, edfa in edfa_dict.items()
-                for edfa_variety, edfa in edfa_dict.items()
+        if ((edfa.allowed_for_design or restrictions is not None) and not edfa.raman)]
-                if ((edfa.allowed_for_design or restrictions is not None) and not edfa.raman)]
 
-    #consider a Raman list because of different gain_min requirement: 
+    # consider a Raman list because of different gain_min requirement:
-    #do not allow extended gain min for Raman
+    # do not allow extended gain min for Raman
     raman_list = [Edfa_list(
-                variety=edfa_variety,
+        variety=edfa_variety,
-                power=min(
+        power=min(
-                    pin
+            pin
-                    +edfa.gain_flatmax
+            + edfa.gain_flatmax
-                    +TARGET_EXTENDED_GAIN,
+            + TARGET_EXTENDED_GAIN,
-                    edfa.p_max
+            edfa.p_max
-                    )
+        )
-                    -power_target,
+        - power_target,
-                gain_min=
+        gain_min=gain_target
-                    gain_target
+        - edfa.gain_min,
-                    -edfa.gain_min,
+        nf=edfa_nf(gain_target, edfa_variety, equipment))
-                nf=edfa_nf(gain_target, edfa_variety, equipment))
+        for edfa_variety, edfa in edfa_dict.items()
-                for edfa_variety, edfa in edfa_dict.items()
+        if (edfa.allowed_for_design and edfa.raman)] \
-                if (edfa.allowed_for_design and edfa.raman)] \
+        if raman_allowed else []
-                if raman_allowed else []
 
-    #merge raman and edfa lists
+    # merge raman and edfa lists
     amp_list = edfa_list + raman_list
 
-    #filter on min gain limitation: 
+    # filter on min gain limitation:
-    acceptable_gain_min_list = [x for x in amp_list if x.gain_min>0]
+    acceptable_gain_min_list = [x for x in amp_list if x.gain_min > 0]
 
     if len(acceptable_gain_min_list) < 1:
-        #do not take this empty list into account for the rest of the code
+        # do not take this empty list into account for the rest of the code
-        #but issue a warning to the user and do not consider Raman
+        # but issue a warning to the user and do not consider Raman
-        #Raman below min gain should not be allowed because i is meant to be a design requirement
+        # Raman below min gain should not be allowed because i is meant to be a design requirement
-        #and raman padding at the amplifier input is impossible!
+        # and raman padding at the amplifier input is impossible!
 
         if len(edfa_list) < 1:
             raise ConfigurationError(f'auto_design could not find any amplifier \
@@ -167,48 +103,45 @@ def select_edfa(raman_allowed, gain_target, power_target, equipment, uid, restri
         else:
             # TODO: convert to logging
             print(
-                f'\x1b[1;31;40m'\
+                f'{ansi_escapes.red}WARNING:{ansi_escapes.reset} target gain in node {uid} is below all available amplifiers min gain: \
-                + f'WARNING: target gain in node {uid} is below all available amplifiers min gain: \
+                  amplifier input padding will be assumed, consider increase span fiber padding instead'
-                    amplifier input padding will be assumed, consider increase span fiber padding instead'\
+            )
-                + '\x1b[0m'
-                )
             acceptable_gain_min_list = edfa_list
 
-    #filter on gain+power limitation:
+    # filter on gain+power limitation:
-    #this list checks both the gain and the power requirement
+    # this list checks both the gain and the power requirement
-    #because of the way .power is calculated in the list
+    # because of the way .power is calculated in the list
-    acceptable_power_list = [x for x in acceptable_gain_min_list if x.power>0]
+    acceptable_power_list = [x for x in acceptable_gain_min_list if x.power > 0]
     if len(acceptable_power_list) < 1:
-        #no amplifier satisfies the required power, so pick the highest power(s):
+        # no amplifier satisfies the required power, so pick the highest power(s):
         power_max = max(acceptable_gain_min_list, key=attrgetter('power')).power
-        #check and pick if other amplifiers may have a similar gain/power
+        # check and pick if other amplifiers may have a similar gain/power
-        #allow a 0.3dB power range 
+        # allow a 0.3dB power range
-        #this allows to chose an amplifier with a better NF subsequentely
+        # this allows to chose an amplifier with a better NF subsequentely
         acceptable_power_list = [x for x in acceptable_gain_min_list
-                                 if x.power-power_max>-0.3]
+                                 if x.power - power_max > -0.3]
-
 
     # gain and power requirements are resolved,
     #       =>chose the amp with the best NF among the acceptable ones:
-    selected_edfa = min(acceptable_power_list, key=attrgetter('nf')) #filter on NF
+    selected_edfa = min(acceptable_power_list, key=attrgetter('nf'))  # filter on NF
-    #check what are the gain and power limitations of this amp
+    # check what are the gain and power limitations of this amp
-    power_reduction = round(min(selected_edfa.power, 0),2)
+    power_reduction = round(min(selected_edfa.power, 0), 2)
     if power_reduction < -0.5:
         print(
-            f'\x1b[1;31;40m'\
+            f'{ansi_escapes.red}WARNING:{ansi_escapes.reset} target gain and power in node {uid}\n \
-            + f'WARNING: target gain and power in node {uid}\n \
     is beyond all available amplifiers capabilities and/or extended_gain_range:\n\
-    a power reduction of {power_reduction} is applied\n'\
+    a power reduction of {power_reduction} is applied\n'
-            + '\x1b[0m'
+        )
-            )
-
 
     return selected_edfa.variety, power_reduction
 
-def target_power(network, node, equipment): #get_fiber_dp
+
+def target_power(network, node, equipment):  # get_fiber_dp
+    if isinstance(node, elements.Roadm):
+        return 0
+
     SPAN_LOSS_REF = 20
     POWER_SLOPE = 0.3
-    power_mode = equipment['Span']['default'].power_mode
     dp_range = list(equipment['Span']['default'].delta_power_range_db)
     node_loss = span_loss(network, node)
 
@@ -216,61 +149,62 @@ def target_power(network, node, equipment): #get_fiber_dp
         dp = round2float((node_loss - SPAN_LOSS_REF) * POWER_SLOPE, dp_range[2])
         dp = max(dp_range[0], dp)
         dp = min(dp_range[1], dp)
-    except KeyError:
+    except IndexError:
         raise ConfigurationError(f'invalid delta_power_range_db definition in eqpt_config[Span]'
-              f'delta_power_range_db: [lower_bound, upper_bound, step]')
+                                 f'delta_power_range_db: [lower_bound, upper_bound, step]')
-
-    if isinstance(node, Roadm):
-        dp = 0
 
     return dp
 
+
 def prev_node_generator(network, node):
     """fused spans interest:
     iterate over all predecessors while they are Fused or Fiber type"""
     try:
-        prev_node = next(n for n in network.predecessors(node))
+        prev_node = next(network.predecessors(node))
     except StopIteration:
         raise NetworkTopologyError(f'Node {node.uid} is not properly connected, please check network topology')
     # yield and re-iterate
-    if isinstance(prev_node, Fused) or isinstance(node, Fused):
+    if isinstance(prev_node, elements.Fused) or isinstance(node, elements.Fused):
         yield prev_node
         yield from prev_node_generator(network, prev_node)
     else:
         StopIteration
 
+
 def next_node_generator(network, node):
     """fused spans interest:
     iterate over all successors while they are Fused or Fiber type"""
     try:
-        next_node = next(n for n in network.successors(node))
+        next_node = next(network.successors(node))
     except StopIteration:
         raise NetworkTopologyError('Node {node.uid} is not properly connected, please check network topology')
     # yield and re-iterate
-    if isinstance(next_node, Fused) or isinstance(node, Fused):
+    if isinstance(next_node, elements.Fused) or isinstance(node, elements.Fused):
         yield next_node
         yield from next_node_generator(network, next_node)
     else:
         StopIteration
 
+
 def span_loss(network, node):
     """Fused span interest:
     return the total span loss of all the fibers spliced by a Fused node"""
     loss = node.loss if node.passive else 0
     try:
-        prev_node = next(n for n in network.predecessors(node))
+        prev_node = next(network.predecessors(node))
-        if isinstance(prev_node, Fused):
+        if isinstance(prev_node, elements.Fused):
             loss += sum(n.loss for n in prev_node_generator(network, node))
     except StopIteration:
         pass
     try:
-        next_node = next(n for n in network.successors(node))
+        next_node = next(network.successors(node))
-        if isinstance(next_node, Fused):
+        if isinstance(next_node, elements.Fused):
             loss += sum(n.loss for n in next_node_generator(network, node))
     except StopIteration:
         pass
     return loss
 
+
 def find_first_node(network, node):
     """Fused node interest:
     returns the 1st node at the origin of a succession of fused nodes
@@ -280,6 +214,7 @@ def find_first_node(network, node):
         pass
     return this_node
 
+
 def find_last_node(network, node):
     """Fused node interest:
     returns the last node in a succession of fused nodes
@@ -289,67 +224,83 @@ def find_last_node(network, node):
         pass
     return this_node
 
+
 def set_amplifier_voa(amp, power_target, power_mode):
-    VOA_MARGIN = 1 #do not maximize the VOA optimization
+    VOA_MARGIN = 1  # do not maximize the VOA optimization
     if amp.out_voa is None:
-        if power_mode:
+        if power_mode and amp.params.out_voa_auto:
-            gain_target = amp.effective_gain
+            voa = min(amp.params.p_max - power_target,
-            voa = min(amp.params.p_max-power_target,
+                      amp.params.gain_flatmax - amp.effective_gain)
-                      amp.params.gain_flatmax-amp.effective_gain)
+            voa = max(round2float(voa, 0.5) - VOA_MARGIN, 0)
-            voa = max(round2float(max(voa, 0), 0.5) - VOA_MARGIN, 0) if amp.params.out_voa_auto else 0
             amp.delta_p = amp.delta_p + voa
             amp.effective_gain = amp.effective_gain + voa
         else:
-            voa = 0 # no output voa optimization in gain mode
+            voa = 0  # no output voa optimization in gain mode
         amp.out_voa = voa
 
-def set_egress_amplifier(network, roadm, equipment, pref_total_db):
+
+def set_egress_amplifier(network, this_node, equipment, pref_ch_db, pref_total_db):
+    """ this node can be a transceiver or a ROADM (same function called in both cases)
+    """
     power_mode = equipment['Span']['default'].power_mode
-    next_oms = (n for n in network.successors(roadm) if not isinstance(n, Transceiver))
+    next_oms = (n for n in network.successors(this_node) if not isinstance(n, elements.Transceiver))
+    this_node_degree = {k: v for k, v in this_node.per_degree_pch_out_db.items()} if hasattr(this_node, 'per_degree_pch_out_db') else {}
     for oms in next_oms:
-        #go through all the OMS departing from the Roadm
+        # go through all the OMS departing from the ROADM
-        node = roadm
+        prev_node = this_node
-        prev_node = roadm
+        node = oms
-        next_node = oms
+        # if isinstance(next_node, elements.Fused): #support ROADM wo egress amp for metro applications
-        # if isinstance(next_node, Fused): #support ROADM wo egress amp for metro applications
         #     node = find_last_node(next_node)
         #     next_node = next(n for n in network.successors(node))
         #     next_node = find_last_node(next_node)
-        prev_dp = getattr(node.params, 'target_pch_out_db', 0)
+        if node.uid not in this_node_degree:
+            # if no target power is defined on this degree or no per degree target power is given use the global one
+            # if target_pch_out_db  is not an attribute, then the element must be a transceiver
+            this_node_degree[node.uid] = getattr(this_node.params, 'target_pch_out_db', 0)
+        # use the target power on this degree
+        prev_dp = this_node_degree[node.uid] - pref_ch_db
         dp = prev_dp
         prev_voa = 0
         voa = 0
-        while True:
+        visited_nodes = []
-        #go through all nodes in the OMS (loop until next Roadm instance)
+        while not (isinstance(node, elements.Roadm) or isinstance(node, elements.Transceiver)):
-            if isinstance(node, Edfa):
+            # go through all nodes in the OMS (loop until next Roadm instance)
+            try:
+                next_node = next(network.successors(node))
+            except StopIteration:
+                raise NetworkTopologyError(f'{type(node).__name__} {node.uid} is not properly connected, please check network topology')
+            visited_nodes.append(node)
+            if next_node in visited_nodes:
+                raise NetworkTopologyError(f'Loop detected for {type(node).__name__} {node.uid}, please check network topology')
+            if isinstance(node, elements.Edfa):
                 node_loss = span_loss(network, prev_node)
                 voa = node.out_voa if node.out_voa else 0
                 if node.delta_p is None:
                     dp = target_power(network, next_node, equipment)
                 else:
                     dp = node.delta_p
-                gain_from_dp = node_loss + dp - prev_dp + prev_voa
                 if node.effective_gain is None or power_mode:
-                    gain_target = gain_from_dp
+                    gain_target = node_loss + dp - prev_dp + prev_voa
-                else: #gain mode with effective_gain 
+                else:  # gain mode with effective_gain
                     gain_target = node.effective_gain
-                    dp = prev_dp - node_loss + gain_target
+                    dp = prev_dp - node_loss - prev_voa + gain_target
 
                 power_target = pref_total_db + dp
 
-                raman_allowed = False
+                if isinstance(prev_node, elements.Fiber):
-                if isinstance(prev_node, Fiber):
                     max_fiber_lineic_loss_for_raman = \
-                            equipment['Span']['default'].max_fiber_lineic_loss_for_raman
+                        equipment['Span']['default'].max_fiber_lineic_loss_for_raman
                     raman_allowed = prev_node.params.loss_coef < max_fiber_lineic_loss_for_raman
+                else:
+                    raman_allowed = False
 
                 # implementation of restrictions on roadm boosters
-                if isinstance(prev_node,Roadm):
+                if isinstance(prev_node, elements.Roadm):
                     if prev_node.restrictions['booster_variety_list']:
                         restrictions = prev_node.restrictions['booster_variety_list']
                     else:
                         restrictions = None
-                elif isinstance(next_node,Roadm):
+                elif isinstance(next_node, elements.Roadm):
                     # implementation of restrictions on roadm preamp
                     if next_node.restrictions['preamp_variety_list']:
                         restrictions = next_node.restrictions['preamp_variety_list']
@@ -359,89 +310,90 @@ def set_egress_amplifier(network, roadm, equipment, pref_total_db):
                     restrictions = None
 
                 if node.params.type_variety == '':
-                    edfa_variety, power_reduction = select_edfa(raman_allowed, 
+                    edfa_variety, power_reduction = select_edfa(raman_allowed, gain_target, power_target, equipment, node.uid, restrictions)
-                                   gain_target, power_target, equipment, node.uid, restrictions)
                     extra_params = equipment['Edfa'][edfa_variety]
                     node.params.update_params(extra_params.__dict__)
                     dp += power_reduction
                     gain_target += power_reduction
                 elif node.params.raman and not raman_allowed:
-                    print(
+                    print(f'{ansi_escapes.red}WARNING{ansi_escapes.reset}: raman is used in node {node.uid}\n but fiber lineic loss is above threshold\n')
-                        f'\x1b[1;31;40m'\
+                else:
-                        + f'WARNING: raman is used in node {node.uid}\n \
+                    # if variety is imposed by user, and if the gain_target (computed or imposed) is also above
-                but fiber lineic loss is above threshold\n'\
+                    # variety max gain + extended range, then warn that gain > max_gain + extended range
-                        + '\x1b[0m'
+                    if gain_target - equipment['Edfa'][node.params.type_variety].gain_flatmax - \
-                        )                    
+                            equipment['Span']['default'].target_extended_gain > 1e-2:
+                        # 1e-2 to allow a small margin according to round2float min step
+                        print(f'{ansi_escapes.red}WARNING{ansi_escapes.reset}: '
+                              f'WARNING: effective gain in Node {node.uid} is above user '
+                              f'specified amplifier {node.params.type_variety}\n'
+                              f'max flat gain: {equipment["Edfa"][node.params.type_variety].gain_flatmax}dB ; '
+                              f'required gain: {gain_target}dB. Please check amplifier type.')
 
                 node.delta_p = dp if power_mode else None
                 node.effective_gain = gain_target
                 set_amplifier_voa(node, power_target, power_mode)
-            if isinstance(next_node, Roadm) or isinstance(next_node, Transceiver):
+
-                break
             prev_dp = dp
             prev_voa = voa
             prev_node = node
             node = next_node
             # print(f'{node.uid}')
-            next_node = next(n for n in network.successors(node))
 
+    if isinstance(this_node, elements.Roadm):
+        this_node.per_degree_pch_out_db = {k: v for k, v in this_node_degree.items()}
 
 def add_egress_amplifier(network, node):
     next_nodes = [n for n in network.successors(node)
-        if not (isinstance(n, Transceiver) or isinstance(n, Fused) or isinstance(n, Edfa))]
+                  if not (isinstance(n, elements.Transceiver) or isinstance(n, elements.Fused) or isinstance(n, elements.Edfa))]
-        #no amplification for fused spans or TRX
+    # no amplification for fused spans or TRX
     for i, next_node in enumerate(next_nodes):
         network.remove_edge(node, next_node)
-        amp = Edfa(
+        amp = elements.Edfa(
-                    uid = f'Edfa{i}_{node.uid}',
+            uid=f'Edfa{i}_{node.uid}',
-                    params = {},
+            params={},
-                    metadata = {
+            metadata={
-                        'location': {
+                'location': {
-                            'latitude':  (node.lat * 2 + next_node.lat * 2) / 4,
+                    'latitude': (node.lat + next_node.lat) / 2,
-                            'longitude': (node.lng * 2 + next_node.lng * 2) / 4,
+                    'longitude': (node.lng + next_node.lng) / 2,
-                            'city':      node.loc.city,
+                    'city': node.loc.city,
-                            'region':    node.loc.region,
+                    'region': node.loc.region,
-                        }
+                }
-                    },
+            },
-                    operational = {
+            operational={
-                        'gain_target': None,
+                'gain_target': None,
-                        'tilt_target': 0,
+                'tilt_target': 0,
-                    })
+            })
         network.add_node(amp)
-        if isinstance(node,Fiber):
+        if isinstance(node, elements.Fiber):
             edgeweight = node.params.length
         else:
             edgeweight = 0.01
-        network.add_edge(node, amp, weight = edgeweight)
+        network.add_edge(node, amp, weight=edgeweight)
-        network.add_edge(amp, next_node, weight = 0.01)
+        network.add_edge(amp, next_node, weight=0.01)
 
 
 def calculate_new_length(fiber_length, bounds, target_length):
     if fiber_length < bounds.stop:
         return fiber_length, 1
 
-    n_spans = int(fiber_length // target_length)
+    n_spans2 = int(fiber_length // target_length)
+    n_spans1 = n_spans2 + 1
 
-    length1 = fiber_length / (n_spans+1)
+    length1 = fiber_length / n_spans1
-    delta1 = target_length-length1
+    length2 = fiber_length / n_spans2
-    result1 = (length1, n_spans+1)
 
-    length2 = fiber_length / n_spans
+    if (bounds.start <= length1 <= bounds.stop) and not(bounds.start <= length2 <= bounds.stop):
-    delta2 = length2-target_length
+        return (length1, n_spans1)
-    result2 = (length2, n_spans)
+    elif (bounds.start <= length2 <= bounds.stop) and not(bounds.start <= length1 <= bounds.stop):
-
+        return (length2, n_spans2)
-    if (bounds.start<=length1<=bounds.stop) and not(bounds.start<=length2<=bounds.stop):
+    elif target_length - length1 < length2 - target_length:
-        result = result1
+        return (length1, n_spans1)
-    elif (bounds.start<=length2<=bounds.stop) and not(bounds.start<=length1<=bounds.stop):
-        result = result2
     else:
-        result = result1 if delta1 < delta2 else result2
+        return (length2, n_spans2)
-
-    return result
 
 
 def split_fiber(network, fiber, bounds, target_length, equipment):
-    new_length, n_spans = calculate_new_length(fiber.length, bounds, target_length)
+    new_length, n_spans = calculate_new_length(fiber.params.length, bounds, target_length)
     if n_spans == 1:
         return
 
@@ -453,108 +405,99 @@ def split_fiber(network, fiber, bounds, target_length, equipment):
 
     network.remove_node(fiber)
 
-    fiber_params = fiber.params._asdict()
+    fiber.params.length = new_length
-    fiber_params['length'] = new_length / UNITS[fiber.params.length_units]
-    fiber_params['con_in'] = fiber.con_in
-    fiber_params['con_out'] = fiber.con_out
 
-    f = interp1d([prev_node.lng, next_node.lng], [prev_node.lat, next_node.lat])
+    xpos = [prev_node.lng + (next_node.lng - prev_node.lng) * (n + 1) / (n_spans + 1) for n in range(n_spans)]
-    xpos = [prev_node.lng + (next_node.lng - prev_node.lng) * (n+1)/(n_spans+1) for n in range(n_spans)]
+    ypos = [prev_node.lat + (next_node.lat - prev_node.lat) * (n + 1) / (n_spans + 1) for n in range(n_spans)]
-    ypos = f(xpos)
     for span, lng, lat in zip(range(n_spans), xpos, ypos):
-        new_span = Fiber(uid = f'{fiber.uid}_({span+1}/{n_spans})',
+        new_span = elements.Fiber(uid=f'{fiber.uid}_({span+1}/{n_spans})',
-                          metadata = {
+                         type_variety=fiber.type_variety,
-                            'location': {
+                         metadata={
-                                'latitude':  lat,
+                              'location': {
-                                'longitude': lng,
+                                  'latitude': lat,
-                                'city':      fiber.loc.city,
+                                  'longitude': lng,
-                                'region':    fiber.loc.region,
+                                  'city': fiber.loc.city,
-                            }
+                                  'region': fiber.loc.region,
-                          },
+                              }
-                          params = fiber_params)
+                         },
-        if isinstance(prev_node,Fiber):
+                         params=fiber.params.asdict())
+        if isinstance(prev_node, elements.Fiber):
             edgeweight = prev_node.params.length
         else:
             edgeweight = 0.01
-        network.add_edge(prev_node, new_span, weight = edgeweight)
+        network.add_edge(prev_node, new_span, weight=edgeweight)
         prev_node = new_span
-    if isinstance(prev_node,Fiber):
+    if isinstance(prev_node, elements.Fiber):
         edgeweight = prev_node.params.length
     else:
         edgeweight = 0.01
-    network.add_edge(prev_node, next_node, weight = edgeweight)
+    network.add_edge(prev_node, next_node, weight=edgeweight)
+
 
 def add_connector_loss(network, fibers, default_con_in, default_con_out, EOL):
     for fiber in fibers:
-        if fiber.con_in is None: fiber.con_in = default_con_in
-        if fiber.con_out is None: fiber.con_out = default_con_out
-        next_node = next(n for n in network.successors(fiber))
-        if not isinstance(next_node, Fused):
-            fiber.con_out += EOL
-
-def add_fiber_padding(network, fibers, padding):
-    """last_fibers = (fiber for n in network.nodes()
-                         if not (isinstance(n, Fiber) or isinstance(n, Fused))
-                         for fiber in network.predecessors(n)
-                         if isinstance(fiber, Fiber))"""
-    for fiber in fibers:
-        this_span_loss = span_loss(network, fiber)
         try:
             next_node = next(network.successors(fiber))
         except StopIteration:
             raise NetworkTopologyError(f'Fiber {fiber.uid} is not properly connected, please check network topology')
-        if this_span_loss < padding and not (isinstance(next_node, Fused)):
+        if fiber.params.con_in is None:
-            #add a padding att_in at the input of the 1st fiber:
+            fiber.params.con_in = default_con_in
-            #address the case when several fibers are spliced together
+        if fiber.params.con_out is None:
+            fiber.params.con_out = default_con_out
+        if not isinstance(next_node, elements.Fused):
+            fiber.params.con_out += EOL
+
+
+def add_fiber_padding(network, fibers, padding):
+    """last_fibers = (fiber for n in network.nodes()
+                         if not (isinstance(n, elements.Fiber) or isinstance(n, elements.Fused))
+                         for fiber in network.predecessors(n)
+                         if isinstance(fiber, elements.Fiber))"""
+    for fiber in fibers:
+        try:
+            next_node = next(network.successors(fiber))
+        except StopIteration:
+            raise NetworkTopologyError(f'Fiber {fiber.uid} is not properly connected, please check network topology')
+        if isinstance(next_node, elements.Fused):
+            continue
+        this_span_loss = span_loss(network, fiber)
+        if this_span_loss < padding:
+            # add a padding att_in at the input of the 1st fiber:
+            # address the case when several fibers are spliced together
             first_fiber = find_first_node(network, fiber)
             # in order to support no booster , fused might be placed
             # just after a roadm: need to check that first_fiber is really a fiber
-            if isinstance(first_fiber,Fiber):
+            if isinstance(first_fiber, elements.Fiber):
-                if first_fiber.att_in is None:
+                first_fiber.params.att_in = first_fiber.params.att_in + padding - this_span_loss
-                    first_fiber.att_in = padding - this_span_loss
+
-                else:
-                    first_fiber.att_in = first_fiber.att_in + padding - this_span_loss
 
 def build_network(network, equipment, pref_ch_db, pref_total_db):
     default_span_data = equipment['Span']['default']
-    max_length = int(default_span_data.max_length * UNITS[default_span_data.length_units])
+    max_length = int(convert_length(default_span_data.max_length, default_span_data.length_units))
-    min_length = max(int(default_span_data.padding/0.2*1e3),50_000)
+    min_length = max(int(default_span_data.padding / 0.2 * 1e3), 50_000)
     bounds = range(min_length, max_length)
     target_length = max(min_length, 90_000)
-    default_con_in = default_span_data.con_in
-    default_con_out = default_span_data.con_out
-    padding = default_span_data.padding
 
-    #set roadm loss for gain_mode before to build network
+    # set roadm loss for gain_mode before to build network
-    fibers = [f for f in network.nodes() if isinstance(f, Fiber)]
+    fibers = [f for f in network.nodes() if isinstance(f, elements.Fiber)]
-    add_connector_loss(network, fibers, default_con_in, default_con_out, default_span_data.EOL)
+    add_connector_loss(network, fibers, default_span_data.con_in, default_span_data.con_out, default_span_data.EOL)
-    add_fiber_padding(network, fibers, padding)
+    add_fiber_padding(network, fibers, default_span_data.padding)
     # don't group split fiber and add amp in the same loop
     # =>for code clarity (at the expense of speed):
     for fiber in fibers:
         split_fiber(network, fiber, bounds, target_length, equipment)
 
-    amplified_nodes = [n for n in network.nodes()
+    amplified_nodes = [n for n in network.nodes() if isinstance(n, elements.Fiber) or isinstance(n, elements.Roadm)]
-                        if isinstance(n, Fiber) or isinstance(n, Roadm)]
 
     for node in amplified_nodes:
         add_egress_amplifier(network, node)
 
-    roadms = [r for r in network.nodes() if isinstance(r, Roadm)]
+    roadms = [r for r in amplified_nodes if isinstance(r, elements.Roadm)]
     for roadm in roadms:
-        set_egress_amplifier(network, roadm, equipment, pref_total_db)
+        set_egress_amplifier(network, roadm, equipment, pref_ch_db, pref_total_db)
 
-    #support older json input topology wo Roadms:
+    trx = [t for t in network.nodes() if isinstance(t, elements.Transceiver)]
-    if len(roadms) == 0:
+    for t in trx:
-        trx = [t for t in network.nodes() if isinstance(t, Transceiver)]
+        next_node = next(network.successors(t), None)
-        for t in trx:
+        if next_node and not isinstance(next_node, elements.Roadm):
-            set_egress_amplifier(network, t, equipment, pref_total_db)
+            set_egress_amplifier(network, t, equipment, 0, pref_total_db)
-
-def load_sim_params(filename):
-    sim_params = load_json(filename)
-    return SimParams(params=sim_params)
-
-def configure_network(network, sim_params):
-    for node in network.nodes:
-        if isinstance(node, RamanFiber):
-            node.sim_params = sim_params

gnpy/core/node.py

@@ -1,56 +0,0 @@
-#! /bin/usr/python3
-# -*- coding: utf-8 -*-
-
-'''
-gnpy.core.node
-==============
-
-This module contains the base class for a network element.
-
-Strictly, a network element is any callable which accepts an immutable
-:class:`.info.SpectralInformation` object and returns an :class:`.info.SpectralInformation` object
-(a copy).
-
-Network elements MUST implement two attributes .uid and .name representing a
-unique identifier and a printable name.
-
-This base class provides a more convenient way to define a network element
-via subclassing.
-'''
-
-from uuid import uuid4
-from collections import namedtuple
-
-class Location(namedtuple('Location', 'latitude longitude city region')):
-    def __new__(cls, latitude=0, longitude=0, city=None, region=None):
-        return super().__new__(cls, latitude, longitude, city, region)
-
-class Node:
-    def __init__(self, uid, name=None, params=None, metadata=None, operational=None):
-        if name is None:
-            name = uid
-        self.uid, self.name = uid, name
-        if metadata is None:
-            metadata = {'location': {}}
-        if metadata and not isinstance(metadata.get('location'), Location):
-            metadata['location'] = Location(**metadata.pop('location', {}))
-        self.params, self.metadata, self.operational = params, metadata, operational
-
-    @property
-    def coords(self):
-        return self.lng, self.lat
-
-    @property
-    def location(self):
-        return self.metadata['location']
-    loc = location
-
-    @property
-    def longitude(self):
-        return self.location.longitude
-    lng = longitude
-
-    @property
-    def latitude(self):
-        return self.location.latitude
-    lat = latitude

gnpy/core/parameters.py

@@ -0,0 +1,285 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+"""
+gnpy.core.parameters
+====================
+
+This module contains all parameters to configure standard network elements.
+"""
+
+from scipy.constants import c, pi
+from numpy import squeeze, log10, exp
+
+from gnpy.core.utils import db2lin, convert_length
+from gnpy.core.exceptions import ParametersError
+
+
+class Parameters:
+    def asdict(self):
+        class_dict = self.__class__.__dict__
+        instance_dict = self.__dict__
+        new_dict = {}
+        for key in class_dict:
+            if isinstance(class_dict[key], property):
+                new_dict[key] = instance_dict['_' + key]
+        return new_dict
+
+
+class PumpParams(Parameters):
+    def __init__(self, power, frequency, propagation_direction):
+        self._power = power
+        self._frequency = frequency
+        self._propagation_direction = propagation_direction
+
+    @property
+    def power(self):
+        return self._power
+
+    @property
+    def frequency(self):
+        return self._frequency
+
+    @property
+    def propagation_direction(self):
+        return self._propagation_direction
+
+
+class RamanParams(Parameters):
+    def __init__(self, **kwargs):
+        self._flag_raman = kwargs['flag_raman']
+        self._space_resolution = kwargs['space_resolution'] if 'space_resolution' in kwargs else None
+        self._tolerance = kwargs['tolerance'] if 'tolerance' in kwargs else None
+
+    @property
+    def flag_raman(self):
+        return self._flag_raman
+
+    @property
+    def space_resolution(self):
+        return self._space_resolution
+
+    @property
+    def tolerance(self):
+        return self._tolerance
+
+
+class NLIParams(Parameters):
+    def __init__(self, **kwargs):
+        self._nli_method_name = kwargs['nli_method_name']
+        self._wdm_grid_size = kwargs['wdm_grid_size']
+        self._dispersion_tolerance = kwargs['dispersion_tolerance']
+        self._phase_shift_tolerance = kwargs['phase_shift_tolerance']
+        self._f_cut_resolution = None
+        self._f_pump_resolution = None
+        self._computed_channels = kwargs['computed_channels'] if 'computed_channels' in kwargs else None
+
+    @property
+    def nli_method_name(self):
+        return self._nli_method_name
+
+    @property
+    def wdm_grid_size(self):
+        return self._wdm_grid_size
+
+    @property
+    def dispersion_tolerance(self):
+        return self._dispersion_tolerance
+
+    @property
+    def phase_shift_tolerance(self):
+        return self._phase_shift_tolerance
+
+    @property
+    def f_cut_resolution(self):
+        return self._f_cut_resolution
+
+    @f_cut_resolution.setter
+    def f_cut_resolution(self, f_cut_resolution):
+        self._f_cut_resolution = f_cut_resolution
+
+    @property
+    def f_pump_resolution(self):
+        return self._f_pump_resolution
+
+    @f_pump_resolution.setter
+    def f_pump_resolution(self, f_pump_resolution):
+        self._f_pump_resolution = f_pump_resolution
+
+    @property
+    def computed_channels(self):
+        return self._computed_channels
+
+
+class SimParams(Parameters):
+    def __init__(self, **kwargs):
+        try:
+            if 'nli_parameters' in kwargs:
+                self._nli_params = NLIParams(**kwargs['nli_parameters'])
+            else:
+                self._nli_params = None
+            if 'raman_parameters' in kwargs:
+                self._raman_params = RamanParams(**kwargs['raman_parameters'])
+            else:
+                self._raman_params = None
+        except KeyError as e:
+            raise ParametersError(f'Simulation parameters must include {e}. Configuration: {kwargs}')
+
+    @property
+    def nli_params(self):
+        return self._nli_params
+
+    @property
+    def raman_params(self):
+        return self._raman_params
+
+
+class FiberParams(Parameters):
+    def __init__(self, **kwargs):
+        try:
+            self._length = convert_length(kwargs['length'], kwargs['length_units'])
+            # fixed attenuator for padding
+            self._att_in = kwargs['att_in'] if 'att_in' in kwargs else 0
+            # if not defined in the network json connector loss in/out
+            # the None value will be updated in network.py[build_network]
+            # with default values from eqpt_config.json[Spans]
+            self._con_in = kwargs['con_in'] if 'con_in' in kwargs else None
+            self._con_out = kwargs['con_out'] if 'con_out' in kwargs else None
+            if 'ref_wavelength' in kwargs:
+                self._ref_wavelength = kwargs['ref_wavelength']
+                self._ref_frequency = c / self.ref_wavelength
+            elif 'ref_frequency' in kwargs:
+                self._ref_frequency = kwargs['ref_frequency']
+                self._ref_wavelength = c / self.ref_frequency
+            else:
+                self._ref_wavelength = 1550e-9
+                self._ref_frequency = c / self.ref_wavelength
+            self._dispersion = kwargs['dispersion']  # s/m/m
+            self._dispersion_slope = kwargs['dispersion_slope'] if 'dispersion_slope' in kwargs else \
+                -2 * self._dispersion/self.ref_wavelength  # s/m/m/m
+            self._beta2 = -(self.ref_wavelength ** 2) * self.dispersion / (2 * pi * c)  # 1/(m * Hz^2)
+            # Eq. (3.23) in  Abramczyk, Halina. "Dispersion phenomena in optical fibers." Virtual European University
+            # on Lasers. Available online: http://mitr.p.lodz.pl/evu/lectures/Abramczyk3.pdf
+            # (accessed on 25 March 2018) (2005).
+            self._beta3 = ((self.dispersion_slope - (4*pi*c/self.ref_wavelength**3) * self.beta2) /
+                           (2*pi*c/self.ref_wavelength**2)**2)
+            self._gamma = kwargs['gamma']  # 1/W/m
+            self._pmd_coef = kwargs['pmd_coef']  # s/sqrt(m)
+            if type(kwargs['loss_coef']) == dict:
+                self._loss_coef = squeeze(kwargs['loss_coef']['loss_coef_power']) * 1e-3  # lineic loss dB/m
+                self._f_loss_ref = squeeze(kwargs['loss_coef']['frequency'])  # Hz
+            else:
+                self._loss_coef = kwargs['loss_coef'] * 1e-3  # lineic loss dB/m
+                self._f_loss_ref = 193.5e12  # Hz
+            self._lin_attenuation = db2lin(self.length * self.loss_coef)
+            self._lin_loss_exp = self.loss_coef / (10 * log10(exp(1)))  # linear power exponent loss Neper/m
+            self._effective_length = (1 - exp(- self.lin_loss_exp * self.length)) / self.lin_loss_exp
+            self._asymptotic_length = 1 / self.lin_loss_exp
+            # raman parameters (not compulsory)
+            self._raman_efficiency = kwargs['raman_efficiency'] if 'raman_efficiency' in kwargs else None
+            self._pumps_loss_coef = kwargs['pumps_loss_coef'] if 'pumps_loss_coef' in kwargs else None
+        except KeyError as e:
+            raise ParametersError(f'Fiber configurations json must include {e}. Configuration: {kwargs}')
+
+    @property
+    def length(self):
+        return self._length
+
+    @length.setter
+    def length(self, length):
+        """length must be in m"""
+        self._length = length
+
+    @property
+    def att_in(self):
+        return self._att_in
+
+    @att_in.setter
+    def att_in(self, att_in):
+        self._att_in = att_in
+
+    @property
+    def con_in(self):
+        return self._con_in
+
+    @con_in.setter
+    def con_in(self, con_in):
+        self._con_in = con_in
+
+    @property
+    def con_out(self):
+        return self._con_out
+
+    @con_out.setter
+    def con_out(self, con_out):
+        self._con_out = con_out
+
+    @property
+    def dispersion(self):
+        return self._dispersion
+
+    @property
+    def dispersion_slope(self):
+        return self._dispersion_slope
+
+    @property
+    def gamma(self):
+        return self._gamma
+
+    @property
+    def pmd_coef(self):
+        return self._pmd_coef
+
+    @property
+    def ref_wavelength(self):
+        return self._ref_wavelength
+
+    @property
+    def ref_frequency(self):
+        return self._ref_frequency
+
+    @property
+    def beta2(self):
+        return self._beta2
+
+    @property
+    def beta3(self):
+        return self._beta3
+
+    @property
+    def loss_coef(self):
+        return self._loss_coef
+
+    @property
+    def f_loss_ref(self):
+        return self._f_loss_ref
+
+    @property
+    def lin_loss_exp(self):
+        return self._lin_loss_exp
+
+    @property
+    def lin_attenuation(self):
+        return self._lin_attenuation
+
+    @property
+    def effective_length(self):
+        return self._effective_length
+
+    @property
+    def asymptotic_length(self):
+        return self._asymptotic_length
+
+    @property
+    def raman_efficiency(self):
+        return self._raman_efficiency
+
+    @property
+    def pumps_loss_coef(self):
+        return self._pumps_loss_coef
+
+    def asdict(self):
+        dictionary = super().asdict()
+        dictionary['loss_coef'] = self.loss_coef * 1e3
+        dictionary['length_units'] = 'm'
+        return dictionary

gnpy/core/service_sheet.py

@@ -1,268 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-"""
-gnpy.core.service_sheet
-========================
-
-XLS parser that can be called to create a JSON request file in accordance with
-Yang model for requesting path computation.
-
-See: draft-ietf-teas-yang-path-computation-01.txt
-"""
-
-from sys import exit
-try:
-    from xlrd import open_workbook, XL_CELL_EMPTY
-except ModuleNotFoundError:
-    exit('Required: `pip install xlrd`')
-from collections import namedtuple
-from logging import getLogger, basicConfig, CRITICAL, DEBUG, INFO
-from json import dumps
-from pathlib import Path
-from gnpy.core.equipment import load_equipment
-from gnpy.core.utils import db2lin, lin2db
-from gnpy.core.exceptions import ServiceError
-
-SERVICES_COLUMN = 12
-#EQPT_LIBRARY_FILENAME = Path(__file__).parent / 'eqpt_config.json'
-
-all_rows = lambda sheet, start=0: (sheet.row(x) for x in range(start, sheet.nrows))
-logger = getLogger(__name__)
-
-# Type for input data
-class Request(namedtuple('Request', 'request_id source destination trx_type mode \
-    spacing power nb_channel disjoint_from nodes_list is_loose path_bandwidth')):
-    def __new__(cls, request_id, source, destination, trx_type,  mode=None , spacing= None , power = None, nb_channel = None , disjoint_from ='' ,  nodes_list = None, is_loose = '', path_bandwidth = None):
-        return super().__new__(cls, request_id, source, destination, trx_type, mode, spacing, power, nb_channel, disjoint_from,  nodes_list, is_loose, path_bandwidth)
-
-# Type for output data:  // from dutc
-class Element:
-    def __eq__(self, other):
-        return type(self) == type(other) and self.uid == other.uid
-    def __hash__(self):
-        return hash((type(self), self.uid))
-
-class Request_element(Element):
-    def __init__(self, Request, eqpt_filename, bidir):
-        # request_id is str
-        # excel has automatic number formatting that adds .0 on integer values
-        # the next lines recover the pure int value, assuming this .0 is unwanted
-        self.request_id = correct_xlrd_int_to_str_reading(Request.request_id)
-        self.source = f'trx {Request.source}'
-        self.destination = f'trx {Request.destination}'
-        # TODO: the automatic naming generated by excel parser requires that source and dest name 
-        # be a string starting with 'trx' : this is manually added here.
-        self.srctpid = f'trx {Request.source}'
-        self.dsttpid = f'trx {Request.destination}'
-        self.bidir = bidir
-        # test that trx_type belongs to eqpt_config.json
-        # if not replace it with a default
-        equipment = load_equipment(eqpt_filename)
-        try :
-            if equipment['Transceiver'][Request.trx_type]:
-                self.trx_type = correct_xlrd_int_to_str_reading(Request.trx_type)
-            if Request.mode is not None :
-                Requestmode = correct_xlrd_int_to_str_reading(Request.mode)
-                if [mode for mode in equipment['Transceiver'][Request.trx_type].mode if mode['format'] == Requestmode]:
-                    self.mode = Requestmode
-                else : 
-                    msg = f'Request Id: {self.request_id} - could not find tsp : \'{Request.trx_type}\' with mode: \'{Requestmode}\' in eqpt library \nComputation stopped.'
-                    #print(msg)
-                    logger.critical(msg)
-                    exit(1)
-            else:
-                Requestmode = None
-                self.mode = Request.mode
-        except KeyError:
-            msg = f'Request Id: {self.request_id} - could not find tsp : \'{Request.trx_type}\' with mode: \'{Request.mode}\' in eqpt library \nComputation stopped.'
-            #print(msg)
-            logger.critical(msg)
-            raise ServiceError(msg)
-        # excel input are in GHz and dBm
-        if Request.spacing is not None:
-            self.spacing = Request.spacing * 1e9
-        else:
-            msg = f'Request {self.request_id} missing spacing: spacing is mandatory.\ncomputation stopped'
-            logger.critical(msg)
-            raise ServiceError(msg)
-        if Request.power is not None:
-            self.power =  db2lin(Request.power) * 1e-3
-        else:
-            self.power = None
-        if Request.nb_channel is not None :
-            self.nb_channel = int(Request.nb_channel)
-        else:
-            self.nb_channel = None
-        
-        value = correct_xlrd_int_to_str_reading(Request.disjoint_from)
-        self.disjoint_from = [n for n in value.split(' | ') if value]
-        self.nodes_list = []
-        if Request.nodes_list :
-            self.nodes_list = Request.nodes_list.split(' | ')
-
-        # cleaning the list of nodes to remove source and destination
-        # (because the remaining of the program assumes that the nodes list are nodes 
-        # on the path and should not include source and destination)
-        try :
-            self.nodes_list.remove(self.source)
-            msg = f'{self.source} removed from explicit path node-list'
-            logger.info(msg)
-        except ValueError:
-            msg = f'{self.source} already removed from explicit path node-list'
-            logger.info(msg)
-
-        try :
-            self.nodes_list.remove(self.destination)
-            msg = f'{self.destination} removed from explicit path node-list'
-            logger.info(msg)
-        except ValueError:
-            msg = f'{self.destination} already removed from explicit path node-list'
-            logger.info(msg)
-
-        # the excel parser applies the same hop-type to all nodes in the route nodes_list.
-        # user can change this per node in the generated json
-        self.loose = 'LOOSE'
-        if Request.is_loose == 'no' :
-            self.loose = 'STRICT'
-        self.path_bandwidth = None
-        if Request.path_bandwidth is not None:
-            self.path_bandwidth = Request.path_bandwidth * 1e9
-        else:
-            self.path_bandwidth = 0
-
-    uid = property(lambda self: repr(self))
-    @property
-    def pathrequest(self):
-        # Default assumption for bidir is False
-        req_dictionnary = {
-                    'request-id':self.request_id,
-                    'source':    self.source,
-                    'destination':  self.destination,
-                    'src-tp-id': self.srctpid,
-                    'dst-tp-id': self.dsttpid,
-                    'bidirectional': self.bidir,
-                    'path-constraints':{
-                        'te-bandwidth': {
-                            'technology': 'flexi-grid',
-                            'trx_type'  : self.trx_type,
-                            'trx_mode'  : self.mode,
-                            'effective-freq-slot':[{'N': 'null', 'M': 'null'}],
-                            'spacing'   : self.spacing,
-                            'max-nb-of-channel'  : self.nb_channel,
-                            'output-power'       : self.power
-                        }
-                    }
-                }
-
-        if self.nodes_list:
-            req_dictionnary['explicit-route-objects'] = {}
-            temp = {'route-object-include-exclude' : [
-                        {'explicit-route-usage': 'route-include-ero',
-                        'index': self.nodes_list.index(node),
-                        'num-unnum-hop': {
-                            'node-id': f'{node}',
-                            'link-tp-id': 'link-tp-id is not used',
-                            'hop-type': f'{self.loose}',
-                            }
-                        }
-                        for node in self.nodes_list]
-                   }
-            req_dictionnary['explicit-route-objects'] = temp
-        if self.path_bandwidth is not None:
-            req_dictionnary['path-constraints']['te-bandwidth']['path_bandwidth'] = self.path_bandwidth
-            
-        return req_dictionnary
-    @property
-    def pathsync(self):
-        if self.disjoint_from :
-            return {'synchronization-id':self.request_id,
-                'svec': {
-                    'relaxable' : 'false',
-                    'disjointness': 'node link',
-                    'request-id-number': [self.request_id]+ [n for n in self.disjoint_from]
-                }
-            }
-        else:
-            return None
-        # TO-DO: avoid multiple entries with same synchronisation vectors
-    @property
-    def json(self):
-        return self.pathrequest , self.pathsync
-
-def convert_service_sheet(input_filename, eqpt_filename, output_filename='', bidir=False, filter_region=None):
-    """ converts a service sheet into a json structure
-    """
-    if filter_region is None:
-        filter_region = []
-    service = parse_excel(input_filename)
-    req = [Request_element(n, eqpt_filename, bidir) for n in service]
-    # dumps the output into a json file with name
-    # split_filename = [input_filename[0:len(input_filename)-len(suffix_filename)] , suffix_filename[1:]]
-    if output_filename=='':
-        output_filename = f'{str(input_filename)[0:len(str(input_filename))-len(str(input_filename.suffixes[0]))]}_services.json'
-    # for debug
-    # print(json_filename)
-    # if there is no sync vector , do not write any synchronization
-    synchro = [n.json[1] for n in req if n.json[1] is not None]
-    if synchro:
-        data = {
-            'path-request': [n.json[0] for n in req],
-            'synchronization': synchro
-        }
-    else:
-        data = {
-            'path-request': [n.json[0] for n in req]
-            }
-    with open(output_filename, 'w', encoding='utf-8') as f:
-        f.write(dumps(data, indent=2, ensure_ascii=False))
-    return data
-
-def correct_xlrd_int_to_str_reading(v) :
-    if not isinstance(v,str):
-        value = str(int(v))
-        if value.endswith('.0'):
-            value = value[:-2]
-    else:
-        value = v
-    return value
-
-# to be used from dutc
-def parse_row(row, fieldnames):
-    return {f: r.value for f, r in zip(fieldnames, row[0:SERVICES_COLUMN])
-            if r.ctype != XL_CELL_EMPTY}
-#
-
-def parse_excel(input_filename):
-    with open_workbook(input_filename) as wb:
-        service_sheet = wb.sheet_by_name('Service')
-        services = list(parse_service_sheet(service_sheet))
-    return services
-
-def parse_service_sheet(service_sheet):
-    """ reads each column according to authorized fieldnames. order is not important.
-    """
-    logger.info(f'Validating headers on {service_sheet.name!r}')
-    # add a test on field to enable the '' field case that arises when columns on the
-    # right hand side are used as comments or drawing in the excel sheet
-    header = [x.value.strip() for x in service_sheet.row(4)[0:SERVICES_COLUMN]
-                if len(x.value.strip()) > 0]
-
-    # create a service_fieldname independant from the excel column order
-    # to be compatible with any version of the sheet
-    # the following dictionnary records the excel field names and the corresponding parameter's name
-
-    authorized_fieldnames = {
-        'route id':'request_id', 'Source':'source', 'Destination':'destination', \
-        'TRX type':'trx_type', 'Mode' : 'mode', 'System: spacing':'spacing', \
-        'System: input power (dBm)':'power', 'System: nb of channels':'nb_channel',\
-        'routing: disjoint from': 'disjoint_from', 'routing: path':'nodes_list',\
-        'routing: is loose?':'is_loose', 'path bandwidth':'path_bandwidth'}
-    try:
-        service_fieldnames = [authorized_fieldnames[e] for e in header]
-    except KeyError:
-        msg = f'Malformed header on Service sheet: {header} field not in {authorized_fieldnames}'
-        logger.critical(msg)
-        raise ValueError(msg)
-    for row in all_rows(service_sheet, start=5):
-        yield Request(**parse_row(row[0:SERVICES_COLUMN], service_fieldnames))

gnpy/core/units.py

@@ -1,5 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-
-UNITS = {'m': 1,
-         'km': 1E3}

gnpy/core/utils.py

@@ -1,38 +1,26 @@
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 
-'''
+"""
 gnpy.core.utils
 ===============
 
 This module contains utility functions that are used with gnpy.
-'''
+"""
-
-
-import json
 
 from csv import writer
-import numpy as np
+from numpy import pi, cos, sqrt, log10, linspace, zeros, shape, where, logical_and
-from numpy import pi, cos, sqrt, log10
 from scipy import constants
 
+from gnpy.core.exceptions import ConfigurationError
 
-def load_json(filename):
-    with open(filename, 'r', encoding='utf-8') as f:
-        data = json.load(f)
-    return data
-
-
-def save_json(obj, filename):
-    with open(filename, 'w', encoding='utf-8') as f:
-        json.dump(obj, f, indent=2, ensure_ascii=False)
 
 def write_csv(obj, filename):
     """
-    convert dictionary items to a csv file
+    Convert dictionary items to a CSV file the dictionary format:
-    the dictionary format :
+    ::
 
-    {'result category 1':
+        {'result category 1':
                         [
                         # 1st line of results
                         {'header 1' : value_xxx,
@@ -41,66 +29,83 @@ def write_csv(obj, filename):
                         {'header 1' : value_www,
                          'header 2' : value_zzz}
                         ],
-    'result_category 2':
+        'result_category 2':
                         [
                         {},{}
                         ]
-    }
+        }
 
-    the generated csv file will be:
+    The generated csv file will be:
-    result_category 1
+    ::
-    header 1    header 2
+
-    value_xxx   value_yyy
+        result_category 1
-    value_www   value_zzz
+        header 1    header 2
-    result_category 2
+        value_xxx   value_yyy
-    ...
+        value_www   value_zzz
+        result_category 2
+        ...
     """
     with open(filename, 'w', encoding='utf-8') as f:
         w = writer(f)
         for data_key, data_list in obj.items():
-            #main header
+            # main header
             w.writerow([data_key])
-            #sub headers:
+            # sub headers:
             headers = [_ for _ in data_list[0].keys()]
             w.writerow(headers)
             for data_dict in data_list:
                 w.writerow([_ for _ in data_dict.values()])
 
-def c():
-    """
-    Returns the speed of light in meters per second
-    """
-    return constants.c
-
 
 def arrange_frequencies(length, start, stop):
     """Create an array of frequencies
 
     :param length: number of elements
-    :param star: Start frequency in THz
+    :param start: Start frequency in THz
     :param stop: Stop frequency in THz
     :type length: integer
     :type start: float
     :type stop: float
-    :return an array of frequencies determined by the spacing parameter
+    :return: an array of frequencies determined by the spacing parameter
     :rtype: numpy.ndarray
     """
-    return np.linspace(start, stop, length)
+    return linspace(start, stop, length)
-
-def h():
-    """
-    Returns plank's constant in J*s
-    """
-    return constants.h
 
 
 def lin2db(value):
+    """Convert linear unit to logarithmic (dB)
+
+    >>> lin2db(0.001)
+    -30.0
+    >>> round(lin2db(1.0), 2)
+    0.0
+    >>> round(lin2db(1.26), 2)
+    1.0
+    >>> round(lin2db(10.0), 2)
+    10.0
+    >>> round(lin2db(100.0), 2)
+    20.0
+    """
     return 10 * log10(value)
 
 
 def db2lin(value):
+    """Convert logarithimic units to linear
+
+    >>> round(db2lin(10.0), 2)
+    10.0
+    >>> round(db2lin(20.0), 2)
+    100.0
+    >>> round(db2lin(1.0), 2)
+    1.26
+    >>> round(db2lin(0.0), 2)
+    1.0
+    >>> round(db2lin(-10.0), 2)
+    0.1
+    """
     return 10**(value / 10)
 
+
 def round2float(number, step):
     step = round(step, 1)
     if step >= 0.01:
@@ -110,19 +115,28 @@ def round2float(number, step):
         number = round(number, 2)
     return number
 
+
 wavelength2freq = constants.lambda2nu
 freq2wavelength = constants.nu2lambda
 
+
 def freq2wavelength(value):
     """ Converts frequency units to wavelength units.
+
+    >>> round(freq2wavelength(191.35e12) * 1e9, 3)
+    1566.723
+    >>> round(freq2wavelength(196.1e12) * 1e9, 3)
+    1528.773
     """
-    return c() / value
+    return constants.c / value
+
 
 def snr_sum(snr, bw, snr_added, bw_added=12.5e9):
-    snr_added = snr_added - lin2db(bw/bw_added)
+    snr_added = snr_added - lin2db(bw / bw_added)
-    snr = -lin2db(db2lin(-snr)+db2lin(-snr_added))
+    snr = -lin2db(db2lin(-snr) + db2lin(-snr_added))
     return snr
 
+
 def deltawl2deltaf(delta_wl, wavelength):
     """ deltawl2deltaf(delta_wl, wavelength):
     delta_wl is BW in wavelength units
@@ -175,15 +189,16 @@ def rrc(ffs, baud_rate, alpha):
     Ts = 1 / baud_rate
     l_lim = (1 - alpha) / (2 * Ts)
     r_lim = (1 + alpha) / (2 * Ts)
-    hf = np.zeros(np.shape(ffs))
+    hf = zeros(shape(ffs))
-    slope_inds = np.where(
+    slope_inds = where(
-        np.logical_and(np.abs(ffs) > l_lim, np.abs(ffs) < r_lim))
+        logical_and(abs(ffs) > l_lim, abs(ffs) < r_lim))
     hf[slope_inds] = 0.5 * (1 + cos((pi * Ts / alpha) *
-                                    (np.abs(ffs[slope_inds]) - l_lim)))
+                                    (abs(ffs[slope_inds]) - l_lim)))
-    p_inds = np.where(np.logical_and(np.abs(ffs) > 0, np.abs(ffs) < l_lim))
+    p_inds = where(logical_and(abs(ffs) > 0, abs(ffs) < l_lim))
     hf[p_inds] = 1
     return sqrt(hf)
 
+
 def merge_amplifier_restrictions(dict1, dict2):
     """Updates contents of dicts recursively
 
@@ -206,6 +221,7 @@ def merge_amplifier_restrictions(dict1, dict2):
             copy_dict1[key] = dict2[key]
     return copy_dict1
 
+
 def silent_remove(this_list, elem):
     """Remove matching elements from a list without raising ValueError
 
@@ -223,3 +239,59 @@ def silent_remove(this_list, elem):
     except ValueError:
         pass
     return this_list
+
+
+def automatic_nch(f_min, f_max, spacing):
+    """How many channels are available in the spectrum
+
+    :param f_min Lowest frequenecy [Hz]
+    :param f_max Highest frequency [Hz]
+    :param spacing Channel width [Hz]
+    :return Number of uniform channels
+
+    >>> automatic_nch(191.325e12, 196.125e12, 50e9)
+    96
+    >>> automatic_nch(193.475e12, 193.525e12, 50e9)
+    1
+    """
+    return int((f_max - f_min) // spacing)
+
+
+def automatic_fmax(f_min, spacing, nch):
+    """Find the high-frequenecy boundary of a spectrum
+
+    :param f_min Start of the spectrum (lowest frequency edge) [Hz]
+    :param spacing Grid/channel spacing [Hz]
+    :param nch Number of channels
+    :return End of the spectrum (highest frequency) [Hz]
+
+    >>> automatic_fmax(191.325e12, 50e9, 96)
+    196125000000000.0
+    """
+    return f_min + spacing * nch
+
+
+def convert_length(value, units):
+    """Convert length into basic SI units
+
+    >>> convert_length(1, 'km')
+    1000.0
+    >>> convert_length(2.0, 'km')
+    2000.0
+    >>> convert_length(123, 'm')
+    123.0
+    >>> convert_length(123.0, 'm')
+    123.0
+    >>> convert_length(42.1, 'km')
+    42100.0
+    >>> convert_length(666, 'yards')
+    Traceback (most recent call last):
+        ...
+    gnpy.core.exceptions.ConfigurationError: Cannot convert length in "yards" into meters
+    """
+    if units == 'm':
+        return value * 1e0
+    elif units == 'km':
+        return value * 1e3
+    else:
+        raise ConfigurationError(f'Cannot convert length in "{units}" into meters')

gnpy/example-data/create_eqpt_sheet.py

@@ -11,20 +11,22 @@ If not present in the "Nodes" sheet, the "Type" column will be implicitly
 determined based on the topology.
 """
 
-try:
+from xlrd import open_workbook
-    from xlrd import open_workbook
-except ModuleNotFoundError:
-    exit('Required: `pip install xlrd`')
 from argparse import ArgumentParser
 
 PARSER = ArgumentParser()
 PARSER.add_argument('workbook', nargs='?', default='meshTopologyExampleV2.xls',
                     help='create the mandatory columns in Eqpt sheet')
-ALL_ROWS = lambda sh, start=0: (sh.row(x) for x in range(start, sh.nrows))
+
+
+def ALL_ROWS(sh, start=0):
+    return (sh.row(x) for x in range(start, sh.nrows))
+
 
 class Node:
     """ Node element contains uid, list of connected nodes and eqpt type
     """
+
     def __init__(self, uid, to_node):
         self.uid = uid
         self.to_node = to_node
@@ -36,6 +38,7 @@ class Node:
     def __str__(self):
         return f'uid {self.uid} \nto_node {[node for node in self.to_node]}\neqpt {self.eqpt}\n'
 
+
 def read_excel(input_filename):
     """ read excel Nodes and Links sheets and create a dict of nodes with
     their to_nodes and type of eqpt
@@ -73,6 +76,7 @@ def read_excel(input_filename):
                 exit()
         return nodes
 
+
 def create_eqt_template(nodes, input_filename):
     """ writes list of node A node Z corresponding to Nodes and Links sheets in order
     to help user populating Eqpt
@@ -85,7 +89,6 @@ def create_eqt_template(nodes, input_filename):
            \nNode A \tNode Z \tamp type \tatt_in \tamp gain \ttilt \tatt_out\
            amp type   \tatt_in \tamp gain   \ttilt   \tatt_out\n')
 
-
         for node in nodes.values():
             if node.eqpt == 'ILA':
                 my_file.write(f'{node.uid}\t{node.to_node[0]}\n')
@@ -93,8 +96,8 @@ def create_eqt_template(nodes, input_filename):
                 for to_node in node.to_node:
                     my_file.write(f'{node.uid}\t{to_node}\n')
 
-        print(f'File {output_filename} successfully created with Node A - Node Z ' +
+        print(f'File {output_filename} successfully created with Node A - Node Z entries for Eqpt sheet in excel file.')
-              ' entries for Eqpt sheet in excel file.')
+
 
 if __name__ == '__main__':
     ARGS = PARSER.parse_args()

gnpy/example-data/default_edfa_config.json

@@ -1,198 +1,8 @@
 {
     "nf_ripple": [
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
         0.0
     ],
     "gain_ripple": [
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
-        0.0,
         0.0
     ],
     "dgt": [

gnpy/example-data/edfa_model/amplifier_models_description.rst

@@ -8,7 +8,7 @@ Amplifier models and configuration
 
 Equipment description defines equipment types and parameters.
 It takes place in the default **eqpt_config.json** file. 
-By default **transmission_main_example.py** uses **eqpt_config.json** file and that
+By default **gnpy-transmission-example** uses **eqpt_config.json** file and that
 can be changed with **-e** or **--equipment** command line parameter.
 
 2. Amplifier parameters and subtypes
@@ -266,7 +266,7 @@ In an opensource and multi-vendor environnement, it is needed to support differe
 4. advanced_config_from_json 
 #######################################
 
-The build_oa_json.py library in gnpy/examples/edfa_model can be used to build the json file required for the amplifier advanced_model type_def:
+The build_oa_json.py library in ``gnpy/example-data/edfa_model/`` can be used to build the json file required for the amplifier advanced_model type_def:
 
 Update an existing json file with all the 96ch txt files for a given amplifier type
 amplifier type 'OA_type1' is hard coded but can be modified and other types added

gnpy/example-data/edfa_model/build_oa_json.py

@@ -13,7 +13,6 @@ import re
 import sys
 import json
 import numpy as np
-from gnpy.core.utils import lin2db, db2lin
 
 """amplifier file names
 convert a set of amplifier files + input json definiton file into a valid edfa_json_file:
@@ -35,50 +34,53 @@ the json input file should have the following fields:
 
 """
 
-input_json_file_name = "OA.json" #default path
+input_json_file_name = "OA.json"  # default path
 output_json_file_name = "default_edfa_config.json"
 gain_ripple_field = "gain_ripple"
 nf_ripple_field = "nf_ripple"
 nf_fit_coeff = "nf_fit_coeff"
 
+
 def read_file(field, file_name):
     """read and format the 96 channels txt files describing the amplifier NF and ripple
         convert dfg into gain ripple by removing the mean component
     """
 
-    #with open(path + file_name,'r') as this_file:
+    # with open(path + file_name,'r') as this_file:
     #   data = this_file.read()
-    #data.strip()
+    # data.strip()
     #data = re.sub(r"([0-9])([ ]{1,3})([0-9-+])",r"\1,\3",data)
     #data = list(data.split(","))
     #data = [float(x) for x in data]
     data = np.loadtxt(file_name)
     print(len(data), file_name)
     if field == gain_ripple_field or field == nf_ripple_field:
-        #consider ripple excursion only to avoid redundant information
+        # consider ripple excursion only to avoid redundant information
-        #because the max flat_gain is already given by the 'gain_flat' field in json
+        # because the max flat_gain is already given by the 'gain_flat' field in json
-        #remove the mean component
+        # remove the mean component
         print(file_name, ', mean value =', data.mean(), ' is substracted')
         data = data - data.mean()
     data = data.tolist()
     return data
 
+
 def input_json(path):
     """read the json input file and add all the 96 channels txt files
     create the output json file with output_json_file_name"""
-    with open(path,'r') as edfa_json_file:
+    with open(path, 'r') as edfa_json_file:
         amp_text = edfa_json_file.read()
     amp_dict = json.loads(amp_text)
 
     for k, v in amp_dict.items():
-        if re.search(r'.txt$',str(v)) :
+        if re.search(r'.txt$', str(v)):
             amp_dict[k] = read_file(k, v)
 
     amp_text = json.dumps(amp_dict, indent=4)
-    #print(amp_text)
+    # print(amp_text)
-    with  open(output_json_file_name,'w') as edfa_json_file:
+    with open(output_json_file_name, 'w') as edfa_json_file:
         edfa_json_file.write(amp_text)
 
+
 if __name__ == '__main__':
     if len(sys.argv) == 2:
         path = sys.argv[1]

gnpy/example-data/eqpt_config.json

@@ -146,23 +146,27 @@
       "Fiber":[{
             "type_variety": "SSMF",
             "dispersion": 1.67e-05,
-            "gamma": 0.00127
+            "gamma": 0.00127,
+            "pmd_coef": 1.265e-15
             },
             {
             "type_variety": "NZDF",
             "dispersion": 0.5e-05,
-            "gamma": 0.00146
+            "gamma": 0.00146,
+            "pmd_coef": 1.265e-15
             },
             {
             "type_variety": "LOF",
             "dispersion": 2.2e-05,
-            "gamma": 0.000843
+            "gamma": 0.000843,
+            "pmd_coef": 1.265e-15
             }
       ],
       "RamanFiber":[{
             "type_variety": "SSMF",
             "dispersion": 1.67e-05,
             "gamma": 0.00127,
+            "pmd_coef": 1.265e-15,
             "raman_efficiency": {
               "cr":[
                   0, 9.4E-06, 2.92E-05, 4.88E-05, 6.82E-05, 8.31E-05, 9.4E-05, 0.0001014, 0.0001069, 0.0001119,
@@ -206,6 +210,7 @@
       "Roadm":[{
             "target_pch_out_db": -20,
             "add_drop_osnr": 38,
+            "pmd": 0,
             "restrictions": {
                             "preamp_variety_list":[],
                             "booster_variety_list":[]

gnpy/example-data/meshTopologyExampleV2.json

@@ -635,7 +635,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -644,41 +644,18 @@
       }
     },
     {
-      "uid": "east edfa in Corlay to Loudeac",
+      "uid": "east edfa in Lorient_KMA to Vannes_KBE",
       "metadata": {
         "location": {
-          "city": "Corlay",
+          "city": "Lorient_KMA",
           "region": "RLD",
           "latitude": 2.0,
-          "longitude": 1.0
+          "longitude": 3.0
         }
       },
-      "type": "Edfa",
+      "type": "Fused",
-      "type_variety": "std_low_gain",
+      "params": {
-      "operational": {
+        "loss": 0
-        "gain_target": null,
-        "delta_p": 1.0,
-        "tilt_target": 0,
-        "out_voa": null
-      }
-    },
-    {
-      "uid": "east edfa in Loudeac to Lorient_KMA",
-      "metadata": {
-        "location": {
-          "city": "Loudeac",
-          "region": "RLD",
-          "latitude": 2.0,
-          "longitude": 2.0
-        }
-      },
-      "type": "Edfa",
-      "type_variety": "std_low_gain",
-      "operational": {
-        "gain_target": null,
-        "delta_p": 1.0,
-        "tilt_target": 0,
-        "out_voa": null
       }
     },
     {
@@ -692,7 +669,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -730,7 +707,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -749,7 +726,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -768,7 +745,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -787,7 +764,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -806,7 +783,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -825,45 +802,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_high_gain",
-      "operational": {
-        "gain_target": null,
-        "delta_p": 1.0,
-        "tilt_target": 0,
-        "out_voa": null
-      }
-    },
-    {
-      "uid": "west edfa in Corlay to Loudeac",
-      "metadata": {
-        "location": {
-          "city": "Corlay",
-          "region": "RLD",
-          "latitude": 2.0,
-          "longitude": 1.0
-        }
-      },
-      "type": "Edfa",
-      "type_variety": "std_low_gain",
-      "operational": {
-        "gain_target": null,
-        "delta_p": 1.0,
-        "tilt_target": 0,
-        "out_voa": null
-      }
-    },
-    {
-      "uid": "west edfa in Loudeac to Lorient_KMA",
-      "metadata": {
-        "location": {
-          "city": "Loudeac",
-          "region": "RLD",
-          "latitude": 2.0,
-          "longitude": 2.0
-        }
-      },
-      "type": "Edfa",
-      "type_variety": "std_low_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -958,7 +897,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_high_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -977,7 +916,7 @@
         }
       },
       "type": "Edfa",
-      "type_variety": "std_low_gain",
+      "type_variety": "std_medium_gain",
       "operational": {
         "gain_target": null,
         "delta_p": 1.0,
@@ -1022,21 +961,6 @@
         "tilt_target": 0,
         "out_voa": null
       }
-    },
-    {
-      "uid": "east edfa in Lorient_KMA to Vannes_KBE",
-      "metadata": {
-        "location": {
-          "city": "Lorient_KMA",
-          "region": "RLD",
-          "latitude": 2.0,
-          "longitude": 3.0
-        }
-      },
-      "type": "Fused",
-      "params": {
-        "loss": 0
-      }
     }
   ],
   "connections": [

gnpy/example-data/meshTopologyExampleV2_services.json

@@ -14,8 +14,8 @@
           "trx_mode": null,
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 50000000000.0,
@@ -39,8 +39,8 @@
           "trx_mode": "mode 1",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 50000000000.0,
@@ -104,8 +104,8 @@
           "trx_mode": "mode 1",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 50000000000.0,
@@ -129,8 +129,8 @@
           "trx_mode": null,
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 75000000000.0,
@@ -154,8 +154,8 @@
           "trx_mode": "mode 2",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 75000000000.0,
@@ -179,8 +179,8 @@
           "trx_mode": "mode 1",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 50000000000.0,
@@ -204,8 +204,8 @@
           "trx_mode": "mode 1",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 50000000000.0,
@@ -229,8 +229,8 @@
           "trx_mode": "mode 1",
           "effective-freq-slot": [
             {
-              "N": "null",
+              "N": null,
-              "M": "null"
+              "M": null
             }
           ],
           "spacing": 75000000000.0,

gnpy/example-data/sim_params.json

@@ -1,5 +1,4 @@
 {
-  "raman_computed_channels": [1, 18, 37, 56, 75],
   "raman_parameters": {
     "flag_raman": true,
     "space_resolution": 10e3,
@@ -9,6 +8,7 @@
   	"nli_method_name": "ggn_spectrally_separated",
   	"wdm_grid_size": 50e9,
   	"dispersion_tolerance": 1,
-  	"phase_shift_tollerance": 0.1
+  	"phase_shift_tolerance": 0.1,
+	"computed_channels": [1, 18, 37, 56, 75] 
   }
 }

gnpy/example-data/write_path_jsontocsv.py

@@ -14,14 +14,14 @@ See: draft-ietf-teas-yang-path-computation-01.txt
 from argparse import ArgumentParser
 from pathlib import Path
 from json import loads
-from gnpy.core.equipment  import load_equipment
+from gnpy.tools.json_io import load_equipment
-from gnpy.core.request  import jsontocsv
+from gnpy.topology.request import jsontocsv
 
 
-parser = ArgumentParser(description = 'A function that writes json path results in an excel sheet.')
+parser = ArgumentParser(description='A function that writes json path results in an excel sheet.')
-parser.add_argument('filename', nargs='?', type = Path)
+parser.add_argument('filename', nargs='?', type=Path)
-parser.add_argument('output_filename', nargs='?', type = Path)
+parser.add_argument('output_filename', nargs='?', type=Path)
-parser.add_argument('eqpt_filename', nargs='?', type = Path, default=Path(__file__).parent / 'eqpt_config.json')
+parser.add_argument('eqpt_filename', nargs='?', type=Path, default=Path(__file__).parent / 'eqpt_config.json')
 
 if __name__ == '__main__':
     args = parser.parse_args()
@@ -32,5 +32,4 @@ if __name__ == '__main__':
             json_data = loads(f.read())
             equipment = load_equipment(args.eqpt_filename)
             print(f'Writing in {args.output_filename}')
-            jsontocsv(json_data,equipment,file)
+            jsontocsv(json_data, equipment, file)
-

gnpy/tools/__init__.py

@@ -0,0 +1,5 @@
+'''
+Processing of data via :py:mod:`.json_io`.
+Utilities for Excel conversion in :py:mod:`.convert` and :py:mod:`.service_sheet`.
+Example code in :py:mod:`.cli_examples` and :py:mod:`.plots`.
+'''

gnpy/tools/cli_examples.py

@@ -0,0 +1,445 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+'''
+gnpy.tools.cli_examples
+=======================
+
+Common code for CLI examples
+'''
+
+import argparse
+from json import dumps
+import logging
+import os.path
+import sys
+from math import ceil
+from numpy import linspace, mean
+from pathlib import Path
+import gnpy.core.ansi_escapes as ansi_escapes
+from gnpy.core.elements import Transceiver, Fiber, RamanFiber
+from gnpy.core.equipment import trx_mode_params
+import gnpy.core.exceptions as exceptions
+from gnpy.core.network import build_network
+from gnpy.core.parameters import SimParams
+from gnpy.core.science_utils import Simulation
+from gnpy.core.utils import db2lin, lin2db, automatic_nch
+from gnpy.topology.request import (ResultElement, jsontocsv, compute_path_dsjctn, requests_aggregation,
+                                   BLOCKING_NOPATH, correct_json_route_list,
+                                   deduplicate_disjunctions, compute_path_with_disjunction,
+                                   PathRequest, compute_constrained_path, propagate)
+from gnpy.topology.spectrum_assignment import build_oms_list, pth_assign_spectrum
+from gnpy.tools.json_io import load_equipment, load_network, load_json, load_requests, save_network, \
+                               requests_from_json, disjunctions_from_json, save_json
+from gnpy.tools.plots import plot_baseline, plot_results
+
+_logger = logging.getLogger(__name__)
+_examples_dir = Path(__file__).parent.parent / 'example-data'
+_help_footer = '''
+This program is part of GNPy, https://github.com/TelecomInfraProject/oopt-gnpy
+
+Learn more at https://gnpy.readthedocs.io/
+
+'''
+_help_fname_json = 'FILE.json'
+_help_fname_json_csv = 'FILE.(json|csv)'
+
+
+def show_example_data_dir():
+    print(f'{_examples_dir}/')
+
+
+def load_common_data(equipment_filename, topology_filename, simulation_filename, save_raw_network_filename):
+    '''Load common configuration from JSON files'''
+
+    try:
+        equipment = load_equipment(equipment_filename)
+        network = load_network(topology_filename, equipment)
+        if save_raw_network_filename is not None:
+            save_network(network, save_raw_network_filename)
+            print(f'{ansi_escapes.blue}Raw network (no optimizations) saved to {save_raw_network_filename}{ansi_escapes.reset}')
+        sim_params = SimParams(**load_json(simulation_filename)) if simulation_filename is not None else None
+        if not sim_params:
+            if next((node for node in network if isinstance(node, RamanFiber)), None) is not None:
+                print(f'{ansi_escapes.red}Invocation error:{ansi_escapes.reset} '
+                      f'RamanFiber requires passing simulation params via --sim-params')
+                sys.exit(1)
+        else:
+            Simulation.set_params(sim_params)
+    except exceptions.EquipmentConfigError as e:
+        print(f'{ansi_escapes.red}Configuration error in the equipment library:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.NetworkTopologyError as e:
+        print(f'{ansi_escapes.red}Invalid network definition:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.ConfigurationError as e:
+        print(f'{ansi_escapes.red}Configuration error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.ParametersError as e:
+        print(f'{ansi_escapes.red}Simulation parameters error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.ServiceError as e:
+        print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+
+    return (equipment, network)
+
+
+def _setup_logging(args):
+    logging.basicConfig(level={2: logging.DEBUG, 1: logging.INFO, 0: logging.CRITICAL}.get(args.verbose, logging.DEBUG))
+
+
+def _add_common_options(parser: argparse.ArgumentParser, network_default: Path):
+    parser.add_argument('topology', nargs='?', type=Path, metavar='NETWORK-TOPOLOGY.(json|xls|xlsx)',
+                        default=network_default,
+                        help='Input network topology')
+    parser.add_argument('-v', '--verbose', action='count', default=0,
+                        help='Increase verbosity (can be specified several times)')
+    parser.add_argument('-e', '--equipment', type=Path, metavar=_help_fname_json,
+                        default=_examples_dir / 'eqpt_config.json', help='Equipment library')
+    parser.add_argument('--sim-params', type=Path, metavar=_help_fname_json,
+                        default=None, help='Path to the JSON containing simulation parameters (required for Raman). '
+                                           f'Example: {_examples_dir / "sim_params.json"}')
+    parser.add_argument('--save-network', type=Path, metavar=_help_fname_json,
+                        help='Save the final network as a JSON file')
+    parser.add_argument('--save-network-before-autodesign', type=Path, metavar=_help_fname_json,
+                        help='Dump the network into a JSON file prior to autodesign')
+
+
+def transmission_main_example(args=None):
+    parser = argparse.ArgumentParser(
+        description='Send a full spectrum load through the network from point A to point B',
+        epilog=_help_footer,
+        formatter_class=argparse.ArgumentDefaultsHelpFormatter,
+        )
+    _add_common_options(parser, network_default=_examples_dir / 'edfa_example_network.json')
+    parser.add_argument('--show-channels', action='store_true', help='Show final per-channel OSNR summary')
+    parser.add_argument('-pl', '--plot', action='store_true')
+    parser.add_argument('-l', '--list-nodes', action='store_true', help='list all transceiver nodes')
+    parser.add_argument('-po', '--power', default=0, help='channel ref power in dBm')
+    parser.add_argument('source', nargs='?', help='source node')
+    parser.add_argument('destination', nargs='?', help='destination node')
+
+    args = parser.parse_args(args if args is not None else sys.argv[1:])
+    _setup_logging(args)
+
+    (equipment, network) = load_common_data(args.equipment, args.topology, args.sim_params, args.save_network_before_autodesign)
+
+    if args.plot:
+        plot_baseline(network)
+
+    transceivers = {n.uid: n for n in network.nodes() if isinstance(n, Transceiver)}
+
+    if not transceivers:
+        sys.exit('Network has no transceivers!')
+    if len(transceivers) < 2:
+        sys.exit('Network has only one transceiver!')
+
+    if args.list_nodes:
+        for uid in transceivers:
+            print(uid)
+        sys.exit()
+
+    # First try to find exact match if source/destination provided
+    if args.source:
+        source = transceivers.pop(args.source, None)
+        valid_source = True if source else False
+    else:
+        source = None
+        _logger.info('No source node specified: picking random transceiver')
+
+    if args.destination:
+        destination = transceivers.pop(args.destination, None)
+        valid_destination = True if destination else False
+    else:
+        destination = None
+        _logger.info('No destination node specified: picking random transceiver')
+
+    # If no exact match try to find partial match
+    if args.source and not source:
+        # TODO code a more advanced regex to find nodes match
+        source = next((transceivers.pop(uid) for uid in transceivers
+                       if args.source.lower() in uid.lower()), None)
+
+    if args.destination and not destination:
+        # TODO code a more advanced regex to find nodes match
+        destination = next((transceivers.pop(uid) for uid in transceivers
+                            if args.destination.lower() in uid.lower()), None)
+
+    # If no partial match or no source/destination provided pick random
+    if not source:
+        source = list(transceivers.values())[0]
+        del transceivers[source.uid]
+
+    if not destination:
+        destination = list(transceivers.values())[0]
+
+    _logger.info(f'source = {args.source!r}')
+    _logger.info(f'destination = {args.destination!r}')
+
+    params = {}
+    params['request_id'] = 0
+    params['trx_type'] = ''
+    params['trx_mode'] = ''
+    params['source'] = source.uid
+    params['destination'] = destination.uid
+    params['bidir'] = False
+    params['nodes_list'] = [destination.uid]
+    params['loose_list'] = ['strict']
+    params['format'] = ''
+    params['path_bandwidth'] = 0
+    params['effective_freq_slot'] = None
+    params['blocking_reason'] = None
+    trx_params = trx_mode_params(equipment)
+    if args.power:
+        trx_params['power'] = db2lin(float(args.power)) * 1e-3
+    params.update(trx_params)
+    req = PathRequest(**params)
+
+    power_mode = equipment['Span']['default'].power_mode
+    print('\n'.join([f'Power mode is set to {power_mode}',
+                     f'=> it can be modified in eqpt_config.json - Span']))
+
+    pref_ch_db = lin2db(req.power * 1e3)  # reference channel power / span (SL=20dB)
+    pref_total_db = pref_ch_db + lin2db(req.nb_channel)  # reference total power / span (SL=20dB)
+    try:
+        build_network(network, equipment, pref_ch_db, pref_total_db)
+    except exceptions.NetworkTopologyError as e:
+        print(f'{ansi_escapes.red}Invalid network definition:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.ConfigurationError as e:
+        print(f'{ansi_escapes.red}Configuration error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    path = compute_constrained_path(network, req)
+
+    spans = [s.params.length for s in path if isinstance(s, RamanFiber) or isinstance(s, Fiber)]
+    print(f'\nThere are {len(spans)} fiber spans over {sum(spans)/1000:.0f} km between {source.uid} '
+          f'and {destination.uid}')
+    print(f'\nNow propagating between {source.uid} and {destination.uid}:')
+
+    try:
+        p_start, p_stop, p_step = equipment['SI']['default'].power_range_db
+        p_num = abs(int(round((p_stop - p_start) / p_step))) + 1 if p_step != 0 else 1
+        power_range = list(linspace(p_start, p_stop, p_num))
+    except TypeError:
+        print('invalid power range definition in eqpt_config, should be power_range_db: [lower, upper, step]')
+        power_range = [0]
+
+    if not power_mode:
+        # power cannot be changed in gain mode
+        power_range = [0]
+    for dp_db in power_range:
+        req.power = db2lin(pref_ch_db + dp_db) * 1e-3
+        if power_mode:
+            print(f'\nPropagating with input power = {ansi_escapes.cyan}{lin2db(req.power*1e3):.2f} dBm{ansi_escapes.reset}:')
+        else:
+            print(f'\nPropagating in {ansi_escapes.cyan}gain mode{ansi_escapes.reset}: power cannot be set manually')
+        infos = propagate(path, req, equipment)
+        if len(power_range) == 1:
+            for elem in path:
+                print(elem)
+            if power_mode:
+                print(f'\nTransmission result for input power = {lin2db(req.power*1e3):.2f} dBm:')
+            else:
+                print(f'\nTransmission results:')
+            print(f'  Final SNR total (0.1 nm): {ansi_escapes.cyan}{mean(destination.snr_01nm):.02f} dB{ansi_escapes.reset}')
+        else:
+            print(path[-1])
+
+    if args.save_network is not None:
+        save_network(network, args.save_network)
+        print(f'{ansi_escapes.blue}Network (after autodesign) saved to {args.save_network}{ansi_escapes.reset}')
+
+    if args.show_channels:
+        print('\nThe total SNR per channel at the end of the line is:')
+        print(
+            '{:>5}{:>26}{:>26}{:>28}{:>28}{:>28}' .format(
+                'Ch. #',
+                'Channel frequency (THz)',
+                'Channel power (dBm)',
+                'OSNR ASE (signal bw, dB)',
+                'SNR NLI (signal bw, dB)',
+                'SNR total (signal bw, dB)'))
+        for final_carrier, ch_osnr, ch_snr_nl, ch_snr in zip(
+                infos.carriers, path[-1].osnr_ase, path[-1].osnr_nli, path[-1].snr):
+            ch_freq = final_carrier.frequency * 1e-12
+            ch_power = lin2db(final_carrier.power.signal * 1e3)
+            print(
+                '{:5}{:26.2f}{:26.2f}{:28.2f}{:28.2f}{:28.2f}' .format(
+                    final_carrier.channel_number, round(
+                        ch_freq, 2), round(
+                        ch_power, 2), round(
+                        ch_osnr, 2), round(
+                        ch_snr_nl, 2), round(
+                            ch_snr, 2)))
+
+    if not args.source:
+        print(f'\n(No source node specified: picked {source.uid})')
+    elif not valid_source:
+        print(f'\n(Invalid source node {args.source!r} replaced with {source.uid})')
+
+    if not args.destination:
+        print(f'\n(No destination node specified: picked {destination.uid})')
+    elif not valid_destination:
+        print(f'\n(Invalid destination node {args.destination!r} replaced with {destination.uid})')
+
+    if args.plot:
+        plot_results(network, path, source, destination)
+
+
+def _path_result_json(pathresult):
+    return {'response': [n.json for n in pathresult]}
+
+
+def path_requests_run(args=None):
+    parser = argparse.ArgumentParser(
+        description='Compute performance for a list of services provided in a json file or an excel sheet',
+        epilog=_help_footer,
+        formatter_class=argparse.ArgumentDefaultsHelpFormatter,
+        )
+    _add_common_options(parser, network_default=_examples_dir / 'meshTopologyExampleV2.xls')
+    parser.add_argument('service_filename', nargs='?', type=Path, metavar='SERVICES-REQUESTS.(json|xls|xlsx)',
+                        default=_examples_dir / 'meshTopologyExampleV2.xls',
+                        help='Input service file')
+    parser.add_argument('-bi', '--bidir', action='store_true',
+                        help='considers that all demands are bidir')
+    parser.add_argument('-o', '--output', type=Path, metavar=_help_fname_json_csv,
+                        help='Store satisifed requests into a JSON or CSV file')
+
+    args = parser.parse_args(args if args is not None else sys.argv[1:])
+    _setup_logging(args)
+
+    _logger.info(f'Computing path requests {args.service_filename} into JSON format')
+    print(f'{ansi_escapes.blue}Computing path requests {os.path.relpath(args.service_filename)} into JSON format{ansi_escapes.reset}')
+
+    (equipment, network) = load_common_data(args.equipment, args.topology, args.sim_params, args.save_network_before_autodesign)
+
+    # Build the network once using the default power defined in SI in eqpt config
+    # TODO power density: db2linp(ower_dbm": 0)/power_dbm": 0 * nb channels as defined by
+    # spacing, f_min and f_max
+    p_db = equipment['SI']['default'].power_dbm
+
+    p_total_db = p_db + lin2db(automatic_nch(equipment['SI']['default'].f_min,
+                                             equipment['SI']['default'].f_max, equipment['SI']['default'].spacing))
+    try:
+        build_network(network, equipment, p_db, p_total_db)
+    except exceptions.NetworkTopologyError as e:
+        print(f'{ansi_escapes.red}Invalid network definition:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    except exceptions.ConfigurationError as e:
+        print(f'{ansi_escapes.red}Configuration error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    if args.save_network is not None:
+        save_network(network, args.save_network)
+        print(f'{ansi_escapes.blue}Network (after autodesign) saved to {args.save_network}{ansi_escapes.reset}')
+    oms_list = build_oms_list(network, equipment)
+
+    try:
+        data = load_requests(args.service_filename, equipment, bidir=args.bidir,
+                             network=network, network_filename=args.topology)
+        rqs = requests_from_json(data, equipment)
+    except exceptions.ServiceError as e:
+        print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {e}')
+        sys.exit(1)
+    # check that request ids are unique. Non unique ids, may
+    # mess the computation: better to stop the computation
+    all_ids = [r.request_id for r in rqs]
+    if len(all_ids) != len(set(all_ids)):
+        for item in list(set(all_ids)):
+            all_ids.remove(item)
+        msg = f'Requests id {all_ids} are not unique'
+        _logger.critical(msg)
+        sys.exit()
+    rqs = correct_json_route_list(network, rqs)
+
+    # pths = compute_path(network, equipment, rqs)
+    dsjn = disjunctions_from_json(data)
+
+    print(f'{ansi_escapes.blue}List of disjunctions{ansi_escapes.reset}')
+    print(dsjn)
+    # need to warn or correct in case of wrong disjunction form
+    # disjunction must not be repeated with same or different ids
+    dsjn = deduplicate_disjunctions(dsjn)
+
+    # Aggregate demands with same exact constraints
+    print(f'{ansi_escapes.blue}Aggregating similar requests{ansi_escapes.reset}')
+
+    rqs, dsjn = requests_aggregation(rqs, dsjn)
+    # TODO export novel set of aggregated demands in a json file
+
+    print(f'{ansi_escapes.blue}The following services have been requested:{ansi_escapes.reset}')
+    print(rqs)
+
+    print(f'{ansi_escapes.blue}Computing all paths with constraints{ansi_escapes.reset}')
+    try:
+        pths = compute_path_dsjctn(network, equipment, rqs, dsjn)
+    except exceptions.DisjunctionError as this_e:
+        print(f'{ansi_escapes.red}Disjunction error:{ansi_escapes.reset} {this_e}')
+        sys.exit(1)
+
+    print(f'{ansi_escapes.blue}Propagating on selected path{ansi_escapes.reset}')
+    propagatedpths, reversed_pths, reversed_propagatedpths = compute_path_with_disjunction(network, equipment, rqs, pths)
+    # Note that deepcopy used in compute_path_with_disjunction returns
+    # a list of nodes which are not belonging to network (they are copies of the node objects).
+    # so there can not be propagation on these nodes.
+
+    pth_assign_spectrum(pths, rqs, oms_list, reversed_pths)
+
+    print(f'{ansi_escapes.blue}Result summary{ansi_escapes.reset}')
+    header = ['req id', '  demand', '  snr@bandwidth A-Z (Z-A)', '  snr@0.1nm A-Z (Z-A)',
+              '  Receiver minOSNR', '  mode', '  Gbit/s', '  nb of tsp pairs',
+              'N,M or blocking reason']
+    data = []
+    data.append(header)
+    for i, this_p in enumerate(propagatedpths):
+        rev_pth = reversed_propagatedpths[i]
+        if rev_pth and this_p:
+            psnrb = f'{round(mean(this_p[-1].snr),2)} ({round(mean(rev_pth[-1].snr),2)})'
+            psnr = f'{round(mean(this_p[-1].snr_01nm), 2)}' +\
+                f' ({round(mean(rev_pth[-1].snr_01nm),2)})'
+        elif this_p:
+            psnrb = f'{round(mean(this_p[-1].snr),2)}'
+            psnr = f'{round(mean(this_p[-1].snr_01nm),2)}'
+
+        try:
+            if rqs[i].blocking_reason in BLOCKING_NOPATH:
+                line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} :',
+                        f'-', f'-', f'-', f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9,2)}',
+                        f'-', f'{rqs[i].blocking_reason}']
+            else:
+                line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} : ', psnrb,
+                        psnr, f'-', f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9, 2)}',
+                        f'-', f'{rqs[i].blocking_reason}']
+        except AttributeError:
+            line = [f'{rqs[i].request_id}', f' {rqs[i].source} to {rqs[i].destination} : ', psnrb,
+                    psnr, f'{rqs[i].OSNR + equipment["SI"]["default"].sys_margins}',
+                    f'{rqs[i].tsp_mode}', f'{round(rqs[i].path_bandwidth * 1e-9,2)}',
+                    f'{ceil(rqs[i].path_bandwidth / rqs[i].bit_rate) }', f'({rqs[i].N},{rqs[i].M})']
+        data.append(line)
+
+    col_width = max(len(word) for row in data for word in row[2:])   # padding
+    firstcol_width = max(len(row[0]) for row in data)   # padding
+    secondcol_width = max(len(row[1]) for row in data)   # padding
+    for row in data:
+        firstcol = ''.join(row[0].ljust(firstcol_width))
+        secondcol = ''.join(row[1].ljust(secondcol_width))
+        remainingcols = ''.join(word.center(col_width, ' ') for word in row[2:])
+        print(f'{firstcol} {secondcol} {remainingcols}')
+    print(f'{ansi_escapes.yellow}Result summary shows mean SNR and OSNR (average over all channels){ansi_escapes.reset}')
+
+    if args.output:
+        result = []
+        # assumes that list of rqs and list of propgatedpths have same order
+        for i, pth in enumerate(propagatedpths):
+            result.append(ResultElement(rqs[i], pth, reversed_propagatedpths[i]))
+        temp = _path_result_json(result)
+        if args.output.suffix.lower() == '.json':
+            save_json(temp, args.output)
+            print(f'{ansi_escapes.blue}Saved JSON to {args.output}{ansi_escapes.reset}')
+        elif args.output.suffix.lower() == '.csv':
+            with open(args.output, "w", encoding='utf-8') as fcsv:
+                jsontocsv(temp, equipment, fcsv)
+            print(f'{ansi_escapes.blue}Saved CSV to {args.output}{ansi_escapes.reset}')
+        else:
+            print(f'{ansi_escapes.red}Cannot save output: neither JSON nor CSV file{ansi_escapes.reset}')
+            sys.exit(1)

gnpy/tools/convert.py

@@ -0,0 +1,812 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+"""
+gnpy.tools.convert
+==================
+
+This module contains utilities for converting between XLS and JSON.
+
+The input XLS file must contain sheets named "Nodes" and "Links".
+It may optionally contain a sheet named "Eqpt".
+
+In the "Nodes" sheet, only the "City" column is mandatory. The column "Type"
+can be determined automatically given the topology (e.g., if degree 2, ILA;
+otherwise, ROADM.) Incorrectly specified types (e.g., ILA for node of
+degree ≠ 2) will be automatically corrected.
+
+In the "Links" sheet, only the first three columns ("Node A", "Node Z" and
+"east Distance (km)") are mandatory.  Missing "west" information is copied from
+the "east" information so that it is possible to input undirected data.
+"""
+
+from xlrd import open_workbook
+from argparse import ArgumentParser
+from collections import namedtuple, Counter, defaultdict
+from itertools import chain
+from json import dumps
+from pathlib import Path
+from copy import copy
+from gnpy.core import ansi_escapes
+from gnpy.core.utils import silent_remove
+from gnpy.core.exceptions import NetworkTopologyError
+from gnpy.core.elements import Edfa, Fused, Fiber
+
+
+def all_rows(sh, start=0):
+    return (sh.row(x) for x in range(start, sh.nrows))
+
+
+class Node(object):
+    def __init__(self, **kwargs):
+        super(Node, self).__init__()
+        self.update_attr(kwargs)
+
+    def update_attr(self, kwargs):
+        clean_kwargs = {k: v for k, v in kwargs.items() if v != ''}
+        for k, v in self.default_values.items():
+            v = clean_kwargs.get(k, v)
+            setattr(self, k, v)
+
+    default_values = {
+        'city': '',
+        'state': '',
+        'country': '',
+        'region': '',
+        'latitude': 0,
+        'longitude': 0,
+        'node_type': 'ILA',
+        'booster_restriction': '',
+        'preamp_restriction': ''
+    }
+
+
+class Link(object):
+    """attribtes from west parse_ept_headers dict
+    +node_a, node_z, west_fiber_con_in, east_fiber_con_in
+    """
+
+    def __init__(self, **kwargs):
+        super(Link, self).__init__()
+        self.update_attr(kwargs)
+        self.distance_units = 'km'
+
+    def update_attr(self, kwargs):
+        clean_kwargs = {k: v for k, v in kwargs.items() if v != ''}
+        for k, v in self.default_values.items():
+            v = clean_kwargs.get(k, v)
+            setattr(self, k, v)
+            k = 'west' + k.split('east')[-1]
+            v = clean_kwargs.get(k, v)
+            setattr(self, k, v)
+
+    def __eq__(self, link):
+        return (self.from_city == link.from_city and self.to_city == link.to_city) \
+            or (self.from_city == link.to_city and self.to_city == link.from_city)
+
+    default_values = {
+        'from_city': '',
+        'to_city': '',
+        'east_distance': 80,
+        'east_fiber': 'SSMF',
+        'east_lineic': 0.2,
+        'east_con_in': None,
+        'east_con_out': None,
+        'east_pmd': 0.1,
+        'east_cable': ''
+    }
+
+
+class Eqpt(object):
+    def __init__(self, **kwargs):
+        super(Eqpt, self).__init__()
+        self.update_attr(kwargs)
+
+    def update_attr(self, kwargs):
+        clean_kwargs = {k: v for k, v in kwargs.items() if v != ''}
+        for k, v in self.default_values.items():
+            v_east = clean_kwargs.get(k, v)
+            setattr(self, k, v_east)
+            k = 'west' + k.split('east')[-1]
+            v_west = clean_kwargs.get(k, v)
+            setattr(self, k, v_west)
+
+    default_values = {
+        'from_city': '',
+        'to_city': '',
+        'east_amp_type': '',
+        'east_att_in': 0,
+        'east_amp_gain': None,
+        'east_amp_dp': None,
+        'east_tilt': 0,
+        'east_att_out': None
+    }
+
+
+class Roadm(object):
+    def __init__(self, **kwargs):
+        super(Roadm, self).__init__()
+        self.update_attr(kwargs)
+
+    def update_attr(self, kwargs):
+        clean_kwargs = {k: v for k, v in kwargs.items() if v != ''}
+        for k, v in self.default_values.items():
+            v = clean_kwargs.get(k, v)
+            setattr(self, k, v)
+
+    default_values = {'from_node': '',
+                      'to_node': '',
+                      'target_pch_out_db': None
+                      }
+
+
+def read_header(my_sheet, line, slice_):
+    """ return the list of headers !:= ''
+    header_i = [(header, header_column_index), ...]
+    in a {line, slice1_x, slice_y} range
+    """
+    Param_header = namedtuple('Param_header', 'header colindex')
+    try:
+        header = [x.value.strip() for x in my_sheet.row_slice(line, slice_[0], slice_[1])]
+        header_i = [Param_header(header, i + slice_[0]) for i, header in enumerate(header) if header != '']
+    except Exception:
+        header_i = []
+    if header_i != [] and header_i[-1].colindex != slice_[1]:
+        header_i.append(Param_header('', slice_[1]))
+    return header_i
+
+
+def read_slice(my_sheet, line, slice_, header):
+    """return the slice range of a given header
+    in a defined range {line, slice_x, slice_y}"""
+    header_i = read_header(my_sheet, line, slice_)
+    slice_range = (-1, -1)
+    if header_i != []:
+        try:
+            slice_range = next((h.colindex, header_i[i + 1].colindex)
+                               for i, h in enumerate(header_i) if header in h.header)
+        except Exception:
+            pass
+    return slice_range
+
+
+def parse_headers(my_sheet, input_headers_dict, headers, start_line, slice_in):
+    """return a dict of header_slice
+    key = column index
+    value = header name"""
+
+    for h0 in input_headers_dict:
+        slice_out = read_slice(my_sheet, start_line, slice_in, h0)
+        iteration = 1
+        while slice_out == (-1, -1) and iteration < 10:
+            # try next lines
+            slice_out = read_slice(my_sheet, start_line + iteration, slice_in, h0)
+            iteration += 1
+        if slice_out == (-1, -1):
+            if h0 in ('east', 'Node A', 'Node Z', 'City'):
+                print(f'{ansi_escapes.red}CRITICAL{ansi_escapes.reset}: missing _{h0}_ header: EXECUTION ENDS')
+                raise NetworkTopologyError(f'Missing _{h0}_ header')
+            else:
+                print(f'missing header {h0}')
+        elif not isinstance(input_headers_dict[h0], dict):
+            headers[slice_out[0]] = input_headers_dict[h0]
+        else:
+            headers = parse_headers(my_sheet, input_headers_dict[h0], headers, start_line + 1, slice_out)
+    if headers == {}:
+        print(f'{ansi_escapes.red}CRITICAL ERROR{ansi_escapes.reset}: could not find any header to read _ ABORT')
+        raise NetworkTopologyError('Could not find any header to read')
+    return headers
+
+
+def parse_row(row, headers):
+    return {f: r.value for f, r in
+            zip([label for label in headers.values()], [row[i] for i in headers])}
+
+
+def parse_sheet(my_sheet, input_headers_dict, header_line, start_line, column):
+    headers = parse_headers(my_sheet, input_headers_dict, {}, header_line, (0, column))
+    for row in all_rows(my_sheet, start=start_line):
+        yield parse_row(row[0: column], headers)
+
+
+def _format_items(items):
+    return '\n'.join(f' - {item}' for item in items)
+
+
+def sanity_check(nodes, links, nodes_by_city, links_by_city, eqpts_by_city):
+
+    duplicate_links = []
+    for l1 in links:
+        for l2 in links:
+            if l1 is not l2 and l1 == l2 and l2 not in duplicate_links:
+                print(f'\nWARNING\n \
+                    link {l1.from_city}-{l1.to_city} is duplicate \
+                    \nthe 1st duplicate link will be removed but you should check Links sheet input')
+                duplicate_links.append(l1)
+    for l in duplicate_links:
+        links.remove(l)
+
+    unreferenced_nodes = [n for n in nodes_by_city if n not in links_by_city]
+    if unreferenced_nodes:
+        raise NetworkTopologyError(f'{ansi_escapes.red}XLS error:{ansi_escapes.reset} The following nodes are not '
+                                   f'referenced from the {ansi_escapes.cyan}Links{ansi_escapes.reset} sheet. '
+                                   f'If unused, remove them from the {ansi_escapes.cyan}Nodes{ansi_escapes.reset} '
+                                   f'sheet:\n'
+                                   + _format_items(unreferenced_nodes))
+    # no need to check "Links" for invalid nodes because that's already in parse_excel()
+    wrong_eqpt_from = [n for n in eqpts_by_city if n not in nodes_by_city]
+    wrong_eqpt_to = [n.to_city for destinations in eqpts_by_city.values()
+                     for n in destinations if n.to_city not in nodes_by_city]
+    wrong_eqpt = wrong_eqpt_from + wrong_eqpt_to
+    if wrong_eqpt:
+        raise NetworkTopologyError(f'{ansi_escapes.red}XLS error:{ansi_escapes.reset} '
+                                   f'The {ansi_escapes.cyan}Eqpt{ansi_escapes.reset} sheet refers to nodes that '
+                                   f'are not defined in the {ansi_escapes.cyan}Nodes{ansi_escapes.reset} sheet:\n'
+                                   + _format_items(wrong_eqpt))
+
+    for city, link in links_by_city.items():
+        if nodes_by_city[city].node_type.lower() == 'ila' and len(link) != 2:
+            # wrong input: ILA sites can only be Degree 2
+            # => correct to make it a ROADM and remove entry in links_by_city
+            # TODO: put in log rather than print
+            print(f'invalid node type ({nodes_by_city[city].node_type})\
+                  specified in {city}, replaced by ROADM')
+            nodes_by_city[city].node_type = 'ROADM'
+            for n in nodes:
+                if n.city == city:
+                    n.node_type = 'ROADM'
+    return nodes, links
+
+
+def create_roadm_element(node, roadms_by_city):
+    """ create the json element for a roadm node, including the different cases:
+    - if there are restrictions
+    - if there are per degree target power defined on a direction
+    direction is defined by the booster name, so that booster must also be created in eqpt sheet
+    if the direction is defined in roadm
+    """
+    roadm = {'uid': f'roadm {node.city}'}
+    if node.preamp_restriction != '' or node.booster_restriction != '':
+        roadm['params'] = {
+            'restrictions': {
+               'preamp_variety_list': silent_remove(node.preamp_restriction.split(' | '), ''),
+               'booster_variety_list': silent_remove(node.booster_restriction.split(' | '), '')}
+                          }
+    if node.city in roadms_by_city.keys():
+        if 'params' not in roadm.keys():
+            roadm['params'] = {}
+        roadm['params']['per_degree_pch_out_db'] = {}
+        for elem in roadms_by_city[node.city]:
+            to_node = f'east edfa in {node.city} to {elem.to_node}'
+            if elem.target_pch_out_db is not None:
+                roadm['params']['per_degree_pch_out_db'][to_node] = elem.target_pch_out_db
+    roadm['metadata'] = {'location': {'city':      node.city,
+                                      'region':    node.region,
+                                      'latitude':  node.latitude,
+                                      'longitude': node.longitude}}
+    roadm['type'] = 'Roadm'
+    return roadm
+
+
+def create_east_eqpt_element(node):
+    """ create amplifiers json elements for the east direction.
+    this includes the case where the case of a fused element defined instead of an
+    ILA in eqpt sheet
+    """
+    eqpt = {'uid': f'east edfa in {node.from_city} to {node.to_city}',
+            'metadata': {'location': {'city':      nodes_by_city[node.from_city].city,
+                                      'region':    nodes_by_city[node.from_city].region,
+                                      'latitude':  nodes_by_city[node.from_city].latitude,
+                                      'longitude': nodes_by_city[node.from_city].longitude}}}
+    if node.east_amp_type.lower() != '' and node.east_amp_type.lower() != 'fused':
+        eqpt['type'] = 'Edfa'
+        eqpt['type_variety'] = f'{node.east_amp_type}'
+        eqpt['operational'] = {'gain_target': node.east_amp_gain,
+                               'delta_p':     node.east_amp_dp,
+                               'tilt_target': node.east_tilt,
+                               'out_voa':     node.east_att_out}
+    elif node.east_amp_type.lower() == '':
+        eqpt['type'] = 'Edfa'
+        eqpt['operational'] = {'gain_target': node.east_amp_gain,
+                               'delta_p':     node.east_amp_dp,
+                               'tilt_target': node.east_tilt,
+                               'out_voa':     node.east_att_out}
+    elif node.east_amp_type.lower() == 'fused':
+        # fused edfa variety is a hack to indicate that there should not be
+        # booster amplifier out the roadm.
+        # If user specifies ILA in Nodes sheet and fused in Eqpt sheet, then assumes that
+        # this is a fused nodes.
+        eqpt['type'] = 'Fused'
+        eqpt['params'] = {'loss': 0}
+    return eqpt
+
+
+def create_west_eqpt_element(node):
+    """ create amplifiers json elements for the west direction.
+    this includes the case where the case of a fused element defined instead of an
+    ILA in eqpt sheet
+    """
+    eqpt = {'uid': f'west edfa in {node.from_city} to {node.to_city}',
+            'metadata': {'location': {'city':      nodes_by_city[node.from_city].city,
+                                      'region':    nodes_by_city[node.from_city].region,
+                                      'latitude':  nodes_by_city[node.from_city].latitude,
+                                      'longitude': nodes_by_city[node.from_city].longitude}},
+            'type': 'Edfa'}
+    if node.west_amp_type.lower() != '' and node.west_amp_type.lower() != 'fused':
+        eqpt['type_variety'] = f'{node.west_amp_type}'
+        eqpt['operational'] = {'gain_target': node.west_amp_gain,
+                               'delta_p':     node.west_amp_dp,
+                               'tilt_target': node.west_tilt,
+                               'out_voa':     node.west_att_out}
+    elif node.west_amp_type.lower() == '':
+        eqpt['operational'] = {'gain_target': node.west_amp_gain,
+                               'delta_p':     node.west_amp_dp,
+                               'tilt_target': node.west_tilt,
+                               'out_voa':     node.west_att_out}
+    elif node.west_amp_type.lower() == 'fused':
+        eqpt['type'] = 'Fused'
+        eqpt['params'] = {'loss': 0}
+    return eqpt
+
+def xls_to_json_data(input_filename, filter_region=[]):
+    nodes, links, eqpts, roadms = parse_excel(input_filename)
+    if filter_region:
+        nodes = [n for n in nodes if n.region.lower() in filter_region]
+        cities = {n.city for n in nodes}
+        links = [lnk for lnk in links if lnk.from_city in cities and
+                 lnk.to_city in cities]
+        cities = {lnk.from_city for lnk in links} | {lnk.to_city for lnk in links}
+        nodes = [n for n in nodes if n.city in cities]
+
+    global nodes_by_city
+    nodes_by_city = {n.city: n for n in nodes}
+
+    global links_by_city
+    links_by_city = defaultdict(list)
+    for link in links:
+        links_by_city[link.from_city].append(link)
+        links_by_city[link.to_city].append(link)
+
+    global eqpts_by_city
+    eqpts_by_city = defaultdict(list)
+    for eqpt in eqpts:
+        eqpts_by_city[eqpt.from_city].append(eqpt)
+
+    roadms_by_city = defaultdict(list)
+    for roadm in roadms:
+        roadms_by_city[roadm.from_node].append(roadm)
+
+    nodes, links = sanity_check(nodes, links, nodes_by_city, links_by_city, eqpts_by_city)
+
+    return {
+        'elements':
+            [{'uid': f'trx {x.city}',
+              'metadata': {'location': {'city': x.city,
+                                        'region': x.region,
+                                        'latitude': x.latitude,
+                                        'longitude': x.longitude}},
+              'type': 'Transceiver'}
+             for x in nodes_by_city.values() if x.node_type.lower() == 'roadm'] +
+            [create_roadm_element(x, roadms_by_city)
+             for x in nodes_by_city.values() if x.node_type.lower() == 'roadm'] +
+            [{'uid': f'west fused spans in {x.city}',
+              'metadata': {'location': {'city': x.city,
+                                        'region': x.region,
+                                        'latitude': x.latitude,
+                                        'longitude': x.longitude}},
+              'type': 'Fused'}
+             for x in nodes_by_city.values() if x.node_type.lower() == 'fused'] +
+            [{'uid': f'east fused spans in {x.city}',
+              'metadata': {'location': {'city': x.city,
+                                        'region': x.region,
+                                        'latitude': x.latitude,
+                                        'longitude': x.longitude}},
+              'type': 'Fused'}
+             for x in nodes_by_city.values() if x.node_type.lower() == 'fused'] +
+            [{'uid': f'fiber ({x.from_city} \u2192 {x.to_city})-{x.east_cable}',
+              'metadata': {'location': midpoint(nodes_by_city[x.from_city],
+                                                nodes_by_city[x.to_city])},
+              'type': 'Fiber',
+              'type_variety': x.east_fiber,
+              'params': {'length': round(x.east_distance, 3),
+                         'length_units': x.distance_units,
+                         'loss_coef': x.east_lineic,
+                         'con_in': x.east_con_in,
+                         'con_out': x.east_con_out}
+              }
+             for x in links] +
+            [{'uid': f'fiber ({x.to_city} \u2192 {x.from_city})-{x.west_cable}',
+              'metadata': {'location': midpoint(nodes_by_city[x.from_city],
+                                                nodes_by_city[x.to_city])},
+              'type': 'Fiber',
+              'type_variety': x.west_fiber,
+              'params': {'length': round(x.west_distance, 3),
+                         'length_units': x.distance_units,
+                         'loss_coef': x.west_lineic,
+                         'con_in':x.west_con_in,
+                         'con_out':x.west_con_out}
+            } # missing ILA construction
+              for x in links] +
+            [create_east_eqpt_element(e) for e in eqpts] +
+            [create_west_eqpt_element(e) for e in eqpts],
+        'connections':
+            list(chain.from_iterable([eqpt_connection_by_city(n.city)
+                                      for n in nodes]))
+            +
+            list(chain.from_iterable(zip(
+                [{'from_node': f'trx {x.city}',
+                  'to_node': f'roadm {x.city}'}
+                 for x in nodes_by_city.values() if x.node_type.lower() == 'roadm'],
+                [{'from_node': f'roadm {x.city}',
+                  'to_node': f'trx {x.city}'}
+                 for x in nodes_by_city.values() if x.node_type.lower() == 'roadm'])))
+    }
+
+
+def convert_file(input_filename, filter_region=[], output_json_file_name=None):
+    data = xls_to_json_data(input_filename, filter_region)
+    if output_json_file_name is None:
+        output_json_file_name = input_filename.with_suffix('.json')
+    with open(output_json_file_name, 'w', encoding='utf-8') as edfa_json_file:
+        edfa_json_file.write(dumps(data, indent=2, ensure_ascii=False))
+        edfa_json_file.write('\n')   # add end of file newline because json dumps does not.
+    return output_json_file_name
+
+
+def corresp_names(input_filename, network):
+    """ a function that builds the correspondance between names given in the excel,
+        and names used in the json, and created by the autodesign.
+        All names are listed
+    """
+    nodes, links, eqpts, roadms = parse_excel(input_filename)
+    fused = [n.uid for n in network.nodes() if isinstance(n, Fused)]
+    ila = [n.uid for n in network.nodes() if isinstance(n, Edfa)]
+
+    corresp_roadm = {x.city: [f'roadm {x.city}'] for x in nodes
+                     if x.node_type.lower() == 'roadm'}
+    corresp_fused = {x.city: [f'west fused spans in {x.city}', f'east fused spans in {x.city}']
+                     for x in nodes if x.node_type.lower() == 'fused' and
+                     f'west fused spans in {x.city}' in fused and
+                     f'east fused spans in {x.city}' in fused}
+
+    # add the special cases when an ila is changed into a fused
+    for my_e in eqpts:
+        name = f'east edfa in {my_e.from_city} to {my_e.to_city}'
+        if my_e.east_amp_type.lower() == 'fused' and name in fused:
+            if my_e.from_city in corresp_fused.keys():
+                corresp_fused[my_e.from_city].append(name)
+            else:
+                corresp_fused[my_e.from_city] = [name]
+        name = f'west edfa in {my_e.from_city} to {my_e.to_city}'
+        if my_e.west_amp_type.lower() == 'fused' and name in fused:
+            if my_e.from_city in corresp_fused.keys():
+                corresp_fused[my_e.from_city].append(name)
+            else:
+                corresp_fused[my_e.from_city] = [name]
+    # build corresp ila based on eqpt sheet
+    # start with east direction
+    corresp_ila = {e.from_city: [f'east edfa in {e.from_city} to {e.to_city}']
+                   for e in eqpts if f'east edfa in {e.from_city} to {e.to_city}' in ila}
+    # west direction, append name or create a new item in dict
+    for my_e in eqpts:
+        name = f'west edfa in {my_e.from_city} to {my_e.to_city}'
+        if name in ila:
+            if my_e.from_city in corresp_ila.keys():
+                corresp_ila[my_e.from_city].append(name)
+            else:
+                corresp_ila[my_e.from_city] = [name]
+    # complete with potential autodesign names: amplifiers
+    for my_l in links:
+        name = f'Edfa0_fiber ({my_l.to_city} \u2192 {my_l.from_city})-{my_l.west_cable}'
+        if name in ila:
+            if my_l.from_city in corresp_ila.keys():
+                # "east edfa in Stbrieuc to Rennes_STA"  is equivalent name as
+                # "Edfa0_fiber (Lannion_CAS → Stbrieuc)-F056"
+                # "west edfa in Stbrieuc to Rennes_STA"  is equivalent name as
+                # "Edfa0_fiber (Rennes_STA → Stbrieuc)-F057"
+                # does not filter names: all types (except boosters) are created.
+                # in case fibers are splitted the name here is a prefix
+                corresp_ila[my_l.from_city].append(name)
+            else:
+                corresp_ila[my_l.from_city] = [name]
+        name = f'Edfa0_fiber ({my_l.from_city} \u2192 {my_l.to_city})-{my_l.east_cable}'
+        if name in ila:
+            if my_l.to_city in corresp_ila.keys():
+                corresp_ila[my_l.to_city].append(name)
+            else:
+                corresp_ila[my_l.to_city] = [name]
+    # merge fused with ila:
+    for key, val in corresp_fused.items():
+        if key in corresp_ila.keys():
+            corresp_ila[key].extend(val)
+        else:
+            corresp_ila[key] = val
+        # no need of roadm booster
+    return corresp_roadm, corresp_fused, corresp_ila
+
+
+def parse_excel(input_filename):
+    link_headers = {
+        'Node A': 'from_city',
+        'Node Z': 'to_city',
+        'east': {
+            'Distance (km)': 'east_distance',
+            'Fiber type': 'east_fiber',
+            'lineic att': 'east_lineic',
+            'Con_in': 'east_con_in',
+            'Con_out': 'east_con_out',
+            'PMD': 'east_pmd',
+            'Cable id': 'east_cable'
+        },
+        'west': {
+            'Distance (km)': 'west_distance',
+            'Fiber type': 'west_fiber',
+            'lineic att': 'west_lineic',
+            'Con_in': 'west_con_in',
+            'Con_out': 'west_con_out',
+            'PMD': 'west_pmd',
+            'Cable id': 'west_cable'
+        }
+    }
+    node_headers = {
+        'City': 'city',
+        'State': 'state',
+        'Country': 'country',
+        'Region': 'region',
+        'Latitude': 'latitude',
+        'Longitude': 'longitude',
+        'Type': 'node_type',
+        'Booster_restriction': 'booster_restriction',
+        'Preamp_restriction': 'preamp_restriction'
+    }
+    eqpt_headers = {
+        'Node A': 'from_city',
+        'Node Z': 'to_city',
+        'east': {
+            'amp type': 'east_amp_type',
+            'att_in': 'east_att_in',
+            'amp gain': 'east_amp_gain',
+            'delta p': 'east_amp_dp',
+            'tilt': 'east_tilt',
+            'att_out': 'east_att_out'
+        },
+        'west': {
+            'amp type': 'west_amp_type',
+            'att_in': 'west_att_in',
+            'amp gain': 'west_amp_gain',
+            'delta p': 'west_amp_dp',
+            'tilt': 'west_tilt',
+            'att_out': 'west_att_out'
+        }
+    }
+    roadm_headers = {'Node A': 'from_node',
+                     'Node Z': 'to_node',
+                     'per degree target power (dBm)': 'target_pch_out_db'
+                     }
+
+    with open_workbook(input_filename) as wb:
+        nodes_sheet = wb.sheet_by_name('Nodes')
+        links_sheet = wb.sheet_by_name('Links')
+        try:
+            eqpt_sheet = wb.sheet_by_name('Eqpt')
+        except Exception:
+            # eqpt_sheet is optional
+            eqpt_sheet = None
+        try:
+            roadm_sheet = wb.sheet_by_name('Roadms')
+        except Exception:
+            # roadm_sheet is optional
+            roadm_sheet = None
+
+        nodes = []
+        for node in parse_sheet(nodes_sheet, node_headers, NODES_LINE, NODES_LINE + 1, NODES_COLUMN):
+            nodes.append(Node(**node))
+        expected_node_types = {'ROADM', 'ILA', 'FUSED'}
+        for n in nodes:
+            if n.node_type not in expected_node_types:
+                n.node_type = 'ILA'
+
+        links = []
+        for link in parse_sheet(links_sheet, link_headers, LINKS_LINE, LINKS_LINE + 2, LINKS_COLUMN):
+            links.append(Link(**link))
+
+        eqpts = []
+        if eqpt_sheet is not None:
+            for eqpt in parse_sheet(eqpt_sheet, eqpt_headers, EQPTS_LINE, EQPTS_LINE + 2, EQPTS_COLUMN):
+                eqpts.append(Eqpt(**eqpt))
+
+        roadms = []
+        if roadm_sheet is not None:
+            for roadm in parse_sheet(roadm_sheet, roadm_headers, ROADMS_LINE, ROADMS_LINE+2, ROADMS_COLUMN):
+                roadms.append(Roadm(**roadm))
+
+    # sanity check
+    all_cities = Counter(n.city for n in nodes)
+    if len(all_cities) != len(nodes):
+        raise ValueError(f'Duplicate city: {all_cities}')
+    bad_links = []
+    for lnk in links:
+        if lnk.from_city not in all_cities or lnk.to_city not in all_cities:
+            bad_links.append([lnk.from_city, lnk.to_city])
+
+    if bad_links:
+        raise NetworkTopologyError(f'{ansi_escapes.red}XLS error:{ansi_escapes.reset} '
+                                   f'The {ansi_escapes.cyan}Links{ansi_escapes.reset} sheet references nodes that '
+                                   f'are not defined in the {ansi_escapes.cyan}Nodes{ansi_escapes.reset} sheet:\n'
+                                   + _format_items(f'{item[0]} -> {item[1]}' for item in bad_links))
+
+    return nodes, links, eqpts, roadms
+
+
+def eqpt_connection_by_city(city_name):
+    other_cities = fiber_dest_from_source(city_name)
+    subdata = []
+    if nodes_by_city[city_name].node_type.lower() in {'ila', 'fused'}:
+        # Then len(other_cities) == 2
+        direction = ['west', 'east']
+        for i in range(2):
+            from_ = fiber_link(other_cities[i], city_name)
+            in_ = eqpt_in_city_to_city(city_name, other_cities[0], direction[i])
+            to_ = fiber_link(city_name, other_cities[1 - i])
+            subdata += connect_eqpt(from_, in_, to_)
+    elif nodes_by_city[city_name].node_type.lower() == 'roadm':
+        for other_city in other_cities:
+            from_ = f'roadm {city_name}'
+            in_ = eqpt_in_city_to_city(city_name, other_city)
+            to_ = fiber_link(city_name, other_city)
+            subdata += connect_eqpt(from_, in_, to_)
+
+            from_ = fiber_link(other_city, city_name)
+            in_ = eqpt_in_city_to_city(city_name, other_city, "west")
+            to_ = f'roadm {city_name}'
+            subdata += connect_eqpt(from_, in_, to_)
+    return subdata
+
+
+def connect_eqpt(from_, in_, to_):
+    connections = []
+    if in_ != '':
+        connections = [{'from_node': from_, 'to_node': in_},
+                       {'from_node': in_, 'to_node': to_}]
+    else:
+        connections = [{'from_node': from_, 'to_node': to_}]
+    return connections
+
+
+def eqpt_in_city_to_city(in_city, to_city, direction='east'):
+    rev_direction = 'west' if direction == 'east' else 'east'
+    amp_direction = f'{direction}_amp_type'
+    amp_rev_direction = f'{rev_direction}_amp_type'
+    return_eqpt = ''
+    if in_city in eqpts_by_city:
+        for e in eqpts_by_city[in_city]:
+            if nodes_by_city[in_city].node_type.lower() == 'roadm':
+                if e.to_city == to_city:
+                    return_eqpt = f'{direction} edfa in {e.from_city} to {e.to_city}'
+            elif nodes_by_city[in_city].node_type.lower() == 'ila':
+                if e.to_city != to_city:
+                    direction = rev_direction
+                    amp_direction = amp_rev_direction
+                return_eqpt = f'{direction} edfa in {e.from_city} to {e.to_city}'
+    if nodes_by_city[in_city].node_type.lower() == 'fused':
+        return_eqpt = f'{direction} fused spans in {in_city}'
+    return return_eqpt
+
+
+def corresp_next_node(network, corresp_ila, corresp_roadm):
+    """ for each name in corresp dictionnaries find the next node in network and its name
+        given by user in excel. for meshTopology_exampleV2.xls:
+        user ILA name Stbrieuc covers the two direction. convert.py creates 2 different ILA
+        with possible names (depending on the direction and if the eqpt was defined in eqpt
+        sheet)
+        - east edfa in Stbrieuc to Rennes_STA
+        - west edfa in Stbrieuc to Rennes_STA
+        - Edfa0_fiber (Lannion_CAS → Stbrieuc)-F056
+        - Edfa0_fiber (Rennes_STA → Stbrieuc)-F057
+        next_nodes finds the user defined name of next node to be able to map the path constraints
+        - east edfa in Stbrieuc to Rennes_STA      next node = Rennes_STA
+        - west edfa in Stbrieuc to Rennes_STA      next node Lannion_CAS
+
+        Edfa0_fiber (Lannion_CAS → Stbrieuc)-F056 and Edfa0_fiber (Rennes_STA → Stbrieuc)-F057
+        do not exist
+        the function supports fiber splitting, fused nodes and shall only be called if
+        excel format is used for both network and service
+    """
+    next_node = {}
+    # consolidate tables and create next_node table
+    for ila_key, ila_list in corresp_ila.items():
+        temp = copy(ila_list)
+        for ila_elem in ila_list:
+            # find the node with ila_elem string _in_ the node uid. 'in' is used instead of
+            # '==' to find composed nodes due to fiber splitting in autodesign.
+            # eg if elem_ila is 'Edfa0_fiber (Lannion_CAS → Stbrieuc)-F056',
+            # node uid 'Edfa0_fiber (Lannion_CAS → Stbrieuc)-F056_(1/2)' is possible
+            correct_ila_name = next(n.uid for n in network.nodes() if ila_elem in n.uid)
+            temp.remove(ila_elem)
+            temp.append(correct_ila_name)
+            ila_nd = next(n for n in network.nodes() if ila_elem in n.uid)
+            next_nd = next(network.successors(ila_nd))
+            # search for the next ILA or ROADM
+            while isinstance(next_nd, (Fiber, Fused)):
+                next_nd = next(network.successors(next_nd))
+            # if next_nd is a ROADM, add the first found correspondance
+            for key, val in corresp_roadm.items():
+                # val is a list of possible names associated with key
+                if next_nd.uid in val:
+                    next_node[correct_ila_name] = key
+                    break
+            # if next_nd was not already added in the dict with the previous loop,
+            # add the first found correspondance in ila names
+            if correct_ila_name not in next_node.keys():
+                for key, val in corresp_ila.items():
+                    # in case of splitted fibers the ila name might not be exact match
+                    if [e for e in val if e in next_nd.uid]:
+                        next_node[correct_ila_name] = key
+                        break
+
+        corresp_ila[ila_key] = temp
+    return corresp_ila, next_node
+
+
+def fiber_dest_from_source(city_name):
+    destinations = []
+    links_from_city = links_by_city[city_name]
+    for l in links_from_city:
+        if l.from_city == city_name:
+            destinations.append(l.to_city)
+        else:
+            destinations.append(l.from_city)
+    return destinations
+
+
+def fiber_link(from_city, to_city):
+    source_dest = (from_city, to_city)
+    links = links_by_city[from_city]
+    link = next(l for l in links if l.from_city in source_dest and l.to_city in source_dest)
+    if link.from_city == from_city:
+        fiber = f'fiber ({link.from_city} \u2192 {link.to_city})-{link.east_cable}'
+    else:
+        fiber = f'fiber ({link.to_city} \u2192 {link.from_city})-{link.west_cable}'
+    return fiber
+
+
+def midpoint(city_a, city_b):
+    lats = city_a.latitude, city_b.latitude
+    longs = city_a.longitude, city_b.longitude
+    try:
+        result = {
+            'latitude': sum(lats) / 2,
+            'longitude': sum(longs) / 2
+        }
+    except TypeError:
+        result = {
+            'latitude': 0,
+            'longitude': 0
+        }
+    return result
+
+# TODO get column size automatically from tupple size
+
+
+NODES_COLUMN = 10
+NODES_LINE = 4
+LINKS_COLUMN = 16
+LINKS_LINE = 3
+EQPTS_LINE = 3
+EQPTS_COLUMN = 14
+ROADMS_LINE = 3
+ROADMS_COLUMN = 3
+
+
+def _do_convert():
+    parser = ArgumentParser()
+    parser.add_argument('workbook', type=Path)
+    parser.add_argument('-f', '--filter-region', action='append', default=[])
+    parser.add_argument('--output', type=Path, help='Name of the generated JSON file')
+    args = parser.parse_args()
+    res = convert_file(args.workbook, args.filter_region, args.output)
+    print(f'XLS -> JSON saved to {res}')
+
+
+if __name__ == '__main__':
+    _do_convert()

gnpy/tools/json_io.py

@@ -0,0 +1,549 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+'''
+gnpy.tools.json_io
+==================
+
+Loading and saving data from JSON files in GNPy's internal data format
+'''
+
+from networkx import DiGraph
+from logging import getLogger
+from pathlib import Path
+import json
+from collections import namedtuple
+from gnpy.core import ansi_escapes, elements
+from gnpy.core.equipment import trx_mode_params
+from gnpy.core.exceptions import ConfigurationError, EquipmentConfigError, NetworkTopologyError, ServiceError
+from gnpy.core.science_utils import estimate_nf_model
+from gnpy.core.utils import automatic_nch, automatic_fmax, merge_amplifier_restrictions
+from gnpy.topology.request import PathRequest, Disjunction
+from gnpy.tools.convert import xls_to_json_data
+from gnpy.tools.service_sheet import read_service_sheet
+import time
+
+
+_logger = getLogger(__name__)
+
+
+Model_vg = namedtuple('Model_vg', 'nf1 nf2 delta_p')
+Model_fg = namedtuple('Model_fg', 'nf0')
+Model_openroadm = namedtuple('Model_openroadm', 'nf_coef')
+Model_hybrid = namedtuple('Model_hybrid', 'nf_ram gain_ram edfa_variety')
+Model_dual_stage = namedtuple('Model_dual_stage', 'preamp_variety booster_variety')
+
+
+class _JsonThing:
+    def update_attr(self, default_values, kwargs, name):
+        clean_kwargs = {k: v for k, v in kwargs.items() if v != ''}
+        for k, v in default_values.items():
+            setattr(self, k, clean_kwargs.get(k, v))
+            if k not in clean_kwargs and name != 'Amp':
+                print(ansi_escapes.red +
+                      f'\n WARNING missing {k} attribute in eqpt_config.json[{name}]' +
+                      f'\n default value is {k} = {v}' +
+                      ansi_escapes.reset)
+                time.sleep(1)
+
+
+class SI(_JsonThing):
+    default_values = {
+        "f_min": 191.35e12,
+        "f_max": 196.1e12,
+        "baud_rate": 32e9,
+        "spacing": 50e9,
+        "power_dbm": 0,
+        "power_range_db": [0, 0, 0.5],
+        "roll_off": 0.15,
+        "tx_osnr": 45,
+        "sys_margins": 0
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'SI')
+
+
+class Span(_JsonThing):
+    default_values = {
+        'power_mode': True,
+        'delta_power_range_db': None,
+        'max_fiber_lineic_loss_for_raman': 0.25,
+        'target_extended_gain': 2.5,
+        'max_length': 150,
+        'length_units': 'km',
+        'max_loss': None,
+        'padding': 10,
+        'EOL': 0,
+        'con_in': 0,
+        'con_out': 0
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'Span')
+
+
+class Roadm(_JsonThing):
+    default_values = {
+        'target_pch_out_db': -17,
+        'add_drop_osnr': 100,
+        'pmd': 0,
+        'restrictions': {
+            'preamp_variety_list': [],
+            'booster_variety_list': []
+        }
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'Roadm')
+
+
+class Transceiver(_JsonThing):
+    default_values = {
+        'type_variety': None,
+        'frequency': None,
+        'mode': {}
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'Transceiver')
+
+
+class Fiber(_JsonThing):
+    default_values = {
+        'type_variety': '',
+        'dispersion': None,
+        'gamma': 0,
+        'pmd_coef': 0
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'Fiber')
+
+
+class RamanFiber(_JsonThing):
+    default_values = {
+        'type_variety': '',
+        'dispersion': None,
+        'gamma': 0,
+        'pmd_coef': 0,
+        'raman_efficiency': None
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'RamanFiber')
+        for param in ('cr', 'frequency_offset'):
+            if param not in self.raman_efficiency:
+                raise EquipmentConfigError(f'RamanFiber.raman_efficiency: missing "{param}" parameter')
+        if self.raman_efficiency['frequency_offset'] != sorted(self.raman_efficiency['frequency_offset']):
+            raise EquipmentConfigError(f'RamanFiber.raman_efficiency.frequency_offset is not sorted')
+
+
+class Amp(_JsonThing):
+    default_values = {
+        'f_min': 191.35e12,
+        'f_max': 196.1e12,
+        'type_variety': '',
+        'type_def': '',
+        'gain_flatmax': None,
+        'gain_min': None,
+        'p_max': None,
+        'nf_model': None,
+        'dual_stage_model': None,
+        'nf_fit_coeff': None,
+        'nf_ripple': None,
+        'dgt': None,
+        'gain_ripple': None,
+        'out_voa_auto': False,
+        'allowed_for_design': False,
+        'raman': False
+    }
+
+    def __init__(self, **kwargs):
+        self.update_attr(self.default_values, kwargs, 'Amp')
+
+    @classmethod
+    def from_json(cls, filename, **kwargs):
+        config = Path(filename).parent / 'default_edfa_config.json'
+
+        type_variety = kwargs['type_variety']
+        type_def = kwargs.get('type_def', 'variable_gain')  # default compatibility with older json eqpt files
+        nf_def = None
+        dual_stage_def = None
+
+        if type_def == 'fixed_gain':
+            try:
+                nf0 = kwargs.pop('nf0')
+            except KeyError:  # nf0 is expected for a fixed gain amp
+                raise EquipmentConfigError(f'missing nf0 value input for amplifier: {type_variety} in equipment config')
+            for k in ('nf_min', 'nf_max'):
+                try:
+                    del kwargs[k]
+                except KeyError:
+                    pass
+            nf_def = Model_fg(nf0)
+        elif type_def == 'advanced_model':
+            config = Path(filename).parent / kwargs.pop('advanced_config_from_json')
+        elif type_def == 'variable_gain':
+            gain_min, gain_max = kwargs['gain_min'], kwargs['gain_flatmax']
+            try:  # nf_min and nf_max are expected for a variable gain amp
+                nf_min = kwargs.pop('nf_min')
+                nf_max = kwargs.pop('nf_max')
+            except KeyError:
+                raise EquipmentConfigError(f'missing nf_min or nf_max value input for amplifier: {type_variety} in equipment config')
+            try:  # remove all remaining nf inputs
+                del kwargs['nf0']
+            except KeyError:
+                pass  # nf0 is not needed for variable gain amp
+            nf1, nf2, delta_p = estimate_nf_model(type_variety, gain_min, gain_max, nf_min, nf_max)
+            nf_def = Model_vg(nf1, nf2, delta_p)
+        elif type_def == 'openroadm':
+            try:
+                nf_coef = kwargs.pop('nf_coef')
+            except KeyError:  # nf_coef is expected for openroadm amp
+                raise EquipmentConfigError(f'missing nf_coef input for amplifier: {type_variety} in equipment config')
+            nf_def = Model_openroadm(nf_coef)
+        elif type_def == 'dual_stage':
+            try:  # nf_ram and gain_ram are expected for a hybrid amp
+                preamp_variety = kwargs.pop('preamp_variety')
+                booster_variety = kwargs.pop('booster_variety')
+            except KeyError:
+                raise EquipmentConfigError(f'missing preamp/booster variety input for amplifier: {type_variety} in equipment config')
+            dual_stage_def = Model_dual_stage(preamp_variety, booster_variety)
+        else:
+            raise EquipmentConfigError(f'Edfa type_def {type_def} does not exist')
+
+        json_data = load_json(config)
+
+        return cls(**{**kwargs, **json_data,
+                      'nf_model': nf_def, 'dual_stage_model': dual_stage_def})
+
+
+def _automatic_spacing(baud_rate):
+    """return the min possible channel spacing for a given baud rate"""
+    # TODO : this should parametrized in a cfg file
+    # list of possible tuples [(max_baud_rate, spacing_for_this_baud_rate)]
+    spacing_list = [(33e9, 37.5e9), (38e9, 50e9), (50e9, 62.5e9), (67e9, 75e9), (92e9, 100e9)]
+    return min((s[1] for s in spacing_list if s[0] > baud_rate), default=baud_rate * 1.2)
+
+
+def load_equipment(filename):
+    json_data = load_json(filename)
+    return _equipment_from_json(json_data, filename)
+
+
+def _update_dual_stage(equipment):
+    edfa_dict = equipment['Edfa']
+    for edfa in edfa_dict.values():
+        if edfa.type_def == 'dual_stage':
+            edfa_preamp = edfa_dict[edfa.dual_stage_model.preamp_variety]
+            edfa_booster = edfa_dict[edfa.dual_stage_model.booster_variety]
+            for key, value in edfa_preamp.__dict__.items():
+                attr_k = 'preamp_' + key
+                setattr(edfa, attr_k, value)
+            for key, value in edfa_booster.__dict__.items():
+                attr_k = 'booster_' + key
+                setattr(edfa, attr_k, value)
+            edfa.p_max = edfa_booster.p_max
+            edfa.gain_flatmax = edfa_booster.gain_flatmax + edfa_preamp.gain_flatmax
+            if edfa.gain_min < edfa_preamp.gain_min:
+                raise EquipmentConfigError(f'Dual stage {edfa.type_variety} minimal gain is lower than its preamp minimal gain')
+    return equipment
+
+
+def _roadm_restrictions_sanity_check(equipment):
+    """ verifies that booster and preamp restrictions specified in roadm equipment are listed
+    in the edfa.
+    """
+    restrictions = equipment['Roadm']['default'].restrictions['booster_variety_list'] + \
+        equipment['Roadm']['default'].restrictions['preamp_variety_list']
+    for amp_name in restrictions:
+        if amp_name not in equipment['Edfa']:
+            raise EquipmentConfigError(f'ROADM restriction {amp_name} does not refer to a defined EDFA name')
+
+
+def _check_fiber_vs_raman_fiber(equipment):
+    """Ensure that Fiber and RamanFiber with the same name define common properties equally"""
+    if 'RamanFiber' not in equipment:
+        return
+    for fiber_type in set(equipment['Fiber'].keys()) & set(equipment['RamanFiber'].keys()):
+        for attr in ('dispersion', 'dispersion-slope', 'gamma', 'pmd-coefficient'):
+            fiber = equipment['Fiber'][fiber_type]
+            raman = equipment['RamanFiber'][fiber_type]
+            a = getattr(fiber, attr, None)
+            b = getattr(raman, attr, None)
+            if a != b:
+                raise EquipmentConfigError(f'WARNING: Fiber and RamanFiber definition of "{fiber_type}" '
+                                           f'disagrees for "{attr}": {a} != {b}')
+
+
+def _equipment_from_json(json_data, filename):
+    """build global dictionnary eqpt_library that stores all eqpt characteristics:
+    edfa type type_variety, fiber type_variety
+    from the eqpt_config.json (filename parameter)
+    also read advanced_config_from_json file parameters for edfa if they are available:
+    typically nf_ripple, dfg gain ripple, dgt and nf polynomial nf_fit_coeff
+    if advanced_config_from_json file parameter is not present: use nf_model:
+    requires nf_min and nf_max values boundaries of the edfa gain range
+    """
+    equipment = {}
+    for key, entries in json_data.items():
+        equipment[key] = {}
+        for entry in entries:
+            subkey = entry.get('type_variety', 'default')
+            if key == 'Edfa':
+                equipment[key][subkey] = Amp.from_json(filename, **entry)
+            elif key == 'Fiber':
+                equipment[key][subkey] = Fiber(**entry)
+            elif key == 'Span':
+                equipment[key][subkey] = Span(**entry)
+            elif key == 'Roadm':
+                equipment[key][subkey] = Roadm(**entry)
+            elif key == 'SI':
+                equipment[key][subkey] = SI(**entry)
+            elif key == 'Transceiver':
+                equipment[key][subkey] = Transceiver(**entry)
+            elif key == 'RamanFiber':
+                equipment[key][subkey] = RamanFiber(**entry)
+            else:
+                raise EquipmentConfigError(f'Unrecognized network element type "{key}"')
+    _check_fiber_vs_raman_fiber(equipment)
+    equipment = _update_dual_stage(equipment)
+    _roadm_restrictions_sanity_check(equipment)
+    return equipment
+
+
+def load_network(filename, equipment):
+    if filename.suffix.lower() in ('.xls', '.xlsx'):
+        json_data = xls_to_json_data(filename)
+    elif filename.suffix.lower() == '.json':
+        json_data = load_json(filename)
+    else:
+        raise ValueError(f'unsupported topology filename extension {filename.suffix.lower()}')
+    return network_from_json(json_data, equipment)
+
+
+def save_network(network: DiGraph, filename: str):
+    '''Dump the network into a JSON file
+
+    :param network: network to work on
+    :param filename: file to write to
+    '''
+    save_json(network_to_json(network), filename)
+
+
+def _cls_for(equipment_type):
+    if equipment_type == 'Edfa':
+        return elements.Edfa
+    if equipment_type == 'Fused':
+        return elements.Fused
+    elif equipment_type == 'Roadm':
+        return elements.Roadm
+    elif equipment_type == 'Transceiver':
+        return elements.Transceiver
+    elif equipment_type == 'Fiber':
+        return elements.Fiber
+    elif equipment_type == 'RamanFiber':
+        return elements.RamanFiber
+    else:
+        raise ConfigurationError(f'Unknown network equipment "{equipment_type}"')
+
+
+def network_from_json(json_data, equipment):
+    # NOTE|dutc: we could use the following, but it would tie our data format
+    #            too closely to the graph library
+    # from networkx import node_link_graph
+    g = DiGraph()
+    for el_config in json_data['elements']:
+        typ = el_config.pop('type')
+        variety = el_config.pop('type_variety', 'default')
+        cls = _cls_for(typ)
+        if typ == 'Fused':
+            # well, there's no variety for the 'Fused' node type
+            pass
+        elif variety in equipment[typ]:
+            extra_params = equipment[typ][variety]
+            temp = el_config.setdefault('params', {})
+            temp = merge_amplifier_restrictions(temp, extra_params.__dict__)
+            el_config['params'] = temp
+            el_config['type_variety'] = variety
+        elif (typ in ['Fiber', 'RamanFiber']) or (typ == 'Edfa' and variety not in ['default', '']):
+            raise ConfigurationError(f'The {typ} of variety type {variety} was not recognized:'
+                                     '\nplease check it is properly defined in the eqpt_config json file')
+        el = cls(**el_config)
+        g.add_node(el)
+
+    nodes = {k.uid: k for k in g.nodes()}
+
+    for cx in json_data['connections']:
+        from_node, to_node = cx['from_node'], cx['to_node']
+        try:
+            if isinstance(nodes[from_node], elements.Fiber):
+                edge_length = nodes[from_node].params.length
+            else:
+                edge_length = 0.01
+            g.add_edge(nodes[from_node], nodes[to_node], weight=edge_length)
+        except KeyError:
+            raise NetworkTopologyError(f'can not find {from_node} or {to_node} defined in {cx}')
+
+    return g
+
+
+def network_to_json(network):
+    data = {
+        'elements': [n.to_json for n in network]
+    }
+    connections = {
+        'connections': [{"from_node": n.uid,
+                         "to_node": next_n.uid}
+                        for n in network
+                        for next_n in network.successors(n) if next_n is not None]
+    }
+    data.update(connections)
+    return data
+
+
+def load_json(filename):
+    with open(filename, 'r', encoding='utf-8') as f:
+        data = json.load(f)
+    return data
+
+
+def save_json(obj, filename):
+    with open(filename, 'w', encoding='utf-8') as f:
+        json.dump(obj, f, indent=2, ensure_ascii=False)
+
+
+def load_requests(filename, eqpt, bidir, network, network_filename):
+    """ loads the requests from a json or an excel file into a data string
+    """
+    if filename.suffix.lower() in ('.xls', '.xlsx'):
+        _logger.info('Automatically converting requests from XLS to JSON')
+        try:
+            return convert_service_sheet(filename, eqpt, network, network_filename=network_filename, bidir=bidir)
+        except ServiceError as this_e:
+            print(f'{ansi_escapes.red}Service error:{ansi_escapes.reset} {this_e}')
+            exit(1)
+    else:
+        return load_json(filename)
+
+
+def requests_from_json(json_data, equipment):
+    """Extract list of requests from data parsed from JSON"""
+    requests_list = []
+
+    for req in json_data['path-request']:
+        # init all params from request
+        params = {}
+        params['request_id'] = req['request-id']
+        params['source'] = req['source']
+        params['bidir'] = req['bidirectional']
+        params['destination'] = req['destination']
+        params['trx_type'] = req['path-constraints']['te-bandwidth']['trx_type']
+        if 'trx_mode' in req['path-constraints']['te-bandwidth'].keys():
+            params['trx_mode'] = req['path-constraints']['te-bandwidth']['trx_mode']
+        else:
+            params['trx_mode'] = None
+        params['format'] = params['trx_mode']
+        params['spacing'] = req['path-constraints']['te-bandwidth']['spacing']
+        try:
+            nd_list = req['explicit-route-objects']['route-object-include-exclude']
+        except KeyError:
+            nd_list = []
+        params['nodes_list'] = [n['num-unnum-hop']['node-id'] for n in nd_list]
+        params['loose_list'] = [n['num-unnum-hop']['hop-type'] for n in nd_list]
+        # recover trx physical param (baudrate, ...) from type and mode
+        # in trx_mode_params optical power is read from equipment['SI']['default'] and
+        # nb_channel is computed based on min max frequency and spacing
+        trx_params = trx_mode_params(equipment, params['trx_type'], params['trx_mode'], True)
+        params.update(trx_params)
+        # print(trx_params['min_spacing'])
+        # optical power might be set differently in the request. if it is indicated then the
+        # params['power'] is updated
+        try:
+            if req['path-constraints']['te-bandwidth']['output-power']:
+                params['power'] = req['path-constraints']['te-bandwidth']['output-power']
+        except KeyError:
+            pass
+        # same process for nb-channel
+        f_min = params['f_min']
+        f_max_from_si = params['f_max']
+        try:
+            if req['path-constraints']['te-bandwidth']['max-nb-of-channel'] is not None:
+                nch = req['path-constraints']['te-bandwidth']['max-nb-of-channel']
+                params['nb_channel'] = nch
+                spacing = params['spacing']
+                params['f_max'] = automatic_fmax(f_min, spacing, nch)
+            else:
+                params['nb_channel'] = automatic_nch(f_min, f_max_from_si, params['spacing'])
+        except KeyError:
+            params['nb_channel'] = automatic_nch(f_min, f_max_from_si, params['spacing'])
+        if 'effective-freq-slot' in req['path-constraints']['te-bandwidth']:
+            # temporarily reads only the first slot
+            params['effective_freq_slot'] = req['path-constraints']['te-bandwidth']['effective-freq-slot'][0]
+        else:
+            params['effective_freq_slot'] = None
+        params['blocking_reason'] = _check_one_request(params, f_max_from_si)
+        try:
+            params['path_bandwidth'] = req['path-constraints']['te-bandwidth']['path_bandwidth']
+        except KeyError:
+            pass
+        requests_list.append(PathRequest(**params))
+    return requests_list
+
+
+def _check_one_request(params, f_max_from_si):
+    """Checks that the requested parameters are consistant (spacing vs nb channel vs transponder mode...)"""
+    f_min = params['f_min']
+    f_max = params['f_max']
+    max_recommanded_nb_channels = automatic_nch(f_min, f_max, params['spacing'])
+    if params['baud_rate'] is not None:
+        # implicitly means that a mode is defined with min_spacing
+        if params['min_spacing'] > params['spacing']:
+            msg = f'Request {params["request_id"]} has spacing below transponder ' +\
+                  f'{params["trx_type"]} {params["trx_mode"]} min spacing value ' +\
+                  f'{params["min_spacing"]*1e-9}GHz.\nComputation stopped'
+            print(msg)
+            _logger.critical(msg)
+            return 'MODE_BAUDRATE_NOT_CONSISTENT_WITH_SPACING'
+        if f_max > f_max_from_si:
+            msg = f'''Requested channel number {params["nb_channel"]}, baud rate {params["baud_rate"]} GHz
+            and requested spacing {params["spacing"]*1e-9}GHz is not consistent with frequency range
+            {f_min*1e-12} THz, {f_max*1e-12} THz, min recommanded spacing {params["min_spacing"]*1e-9}GHz.
+            max recommanded nb of channels is {max_recommanded_nb_channels}.'''
+            _logger.critical(msg)
+            raise ServiceError(msg)
+    return None
+
+
+def disjunctions_from_json(json_data):
+    """ reads the disjunction requests from the json dict and create the list
+        of requested disjunctions for this set of requests
+    """
+    disjunctions_list = []
+    if 'synchronization' in json_data:
+        for snc in json_data['synchronization']:
+            params = {}
+            params['disjunction_id'] = snc['synchronization-id']
+            params['relaxable'] = snc['svec']['relaxable']
+            params['link_diverse'] = 'link' in snc['svec']['disjointness']
+            params['node_diverse'] = 'node' in snc['svec']['disjointness']
+            params['disjunctions_req'] = snc['svec']['request-id-number']
+            disjunctions_list.append(Disjunction(**params))
+
+    return disjunctions_list
+
+
+def convert_service_sheet(
+        input_filename,
+        eqpt,
+        network,
+        network_filename=None,
+        output_filename='',
+        bidir=False,
+        filter_region=None):
+    if output_filename == '':
+        output_filename = f'{str(input_filename)[0:len(str(input_filename))-len(str(input_filename.suffixes[0]))]}_services.json'
+    data = read_service_sheet(input_filename, eqpt, network, network_filename, bidir, filter_region)
+    save_json(data, output_filename)
+    return data

gnpy/tools/plots.py

@@ -0,0 +1,87 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+'''
+gnpy.tools.plots
+================
+
+Graphs and plots usable form a CLI application
+'''
+
+from matplotlib.pyplot import show, axis, figure, title, text
+from networkx import draw_networkx_nodes, draw_networkx_edges, draw_networkx_labels
+from gnpy.core.elements import Transceiver
+
+
+def _try_city(node):
+    return node.location.city if node.location.city else node.uid
+
+
+def plot_baseline(network):
+    edges = set(network.edges())
+    pos = {n: (n.lng, n.lat) for n in network.nodes()}
+    labels = {n: _try_city(n) for n in network.nodes() if isinstance(n, Transceiver)}
+    city_labels = set(labels.values())
+    for n in network.nodes():
+        if n.location.city and n.location.city not in city_labels:
+            labels[n] = n.location.city
+            city_labels.add(n.location.city)
+    label_pos = pos
+
+    fig = figure()
+    kwargs = {'figure': fig, 'pos': pos}
+    plot = draw_networkx_nodes(network, nodelist=network.nodes(), node_color='#ababab', **kwargs)
+    draw_networkx_edges(network, edgelist=edges, edge_color='#ababab', **kwargs)
+    draw_networkx_labels(network, labels=labels, font_size=14, **{**kwargs, 'pos': label_pos})
+    axis('off')
+    show()
+
+
+def plot_results(network, path, source, destination):
+    path_edges = set(zip(path[:-1], path[1:]))
+    edges = set(network.edges()) - path_edges
+    pos = {n: (n.lng, n.lat) for n in network.nodes()}
+    nodes = {}
+    for k, (x, y) in pos.items():
+        nodes.setdefault((round(x, 1), round(y, 1)), []).append(k)
+
+    labels = {n: _try_city(n) for n in network.nodes() if isinstance(n, Transceiver)}
+    city_labels = set(labels.values())
+    for n in network.nodes():
+        if n.location.city and n.location.city not in city_labels:
+            labels[n] = n.location.city
+            city_labels.add(n.location.city)
+    label_pos = pos
+
+    fig = figure()
+    kwargs = {'figure': fig, 'pos': pos}
+    all_nodes = [n for n in network.nodes() if n not in path]
+    plot = draw_networkx_nodes(network, nodelist=all_nodes, node_color='#ababab', node_size=50, **kwargs)
+    draw_networkx_nodes(network, nodelist=path, node_color='#ff0000', node_size=55, **kwargs)
+    draw_networkx_edges(network, edgelist=edges, edge_color='#ababab', **kwargs)
+    draw_networkx_edges(network, edgelist=path_edges, edge_color='#ff0000', **kwargs)
+    draw_networkx_labels(network, labels=labels, font_size=14, **{**kwargs, 'pos': label_pos})
+    title(f'Propagating from {_try_city(source)} to {_try_city(destination)}')
+    axis('off')
+
+    heading = 'Spectral Information\n\n'
+    textbox = text(0.85, 0.20, heading, fontsize=14, fontname='Ubuntu Mono',
+                   verticalalignment='top', transform=fig.axes[0].transAxes,
+                   bbox={'boxstyle': 'round', 'facecolor': 'wheat', 'alpha': 0.5})
+
+    msgs = {(x, y): heading + '\n\n'.join(str(n) for n in ns if n in path)
+            for (x, y), ns in nodes.items()}
+
+    def hover(event):
+        if event.xdata is None or event.ydata is None:
+            return
+        if fig.contains(event):
+            x, y = round(event.xdata, 1), round(event.ydata, 1)
+            if (x, y) in msgs:
+                textbox.set_text(msgs[x, y])
+            else:
+                textbox.set_text(heading)
+            fig.canvas.draw_idle()
+
+    fig.canvas.mpl_connect('motion_notify_event', hover)
+    show()